RNA–Protein interactions for RNA: ENST00000481570.5

COL1A2-208, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 5,993 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-208ENST00000481570 KRTAP4-3Q9BYR4 195 aa3.58□□□□□ -1.84
COL1A2-208ENST00000481570 KRTAP19-6Q3LI70 58 aa3.55□□□□□ -1.84
COL1A2-208ENST00000481570 EPPK1P58107 5090 aaKnown RBP3.51□□□□□ -1.85
COL1A2-208ENST00000481570 MT3P25713 68 aa3.49□□□□□ -1.85
COL1A2-208ENST00000481570 ABCA13Q86UQ4 5058 aa3.47□□□□□ -1.85
COL1A2-208ENST00000481570 LCE1BQ5T7P3 118 aa3.45□□□□□ -1.86
COL1A2-208ENST00000481570 PRM1P04553 51 aa3.44□□□□□ -1.86
COL1A2-208ENST00000481570 LCE1DQ5T752 114 aa3.43□□□□□ -1.86
COL1A2-208ENST00000481570 FSIP2Q5CZC0 6907 aa3.4□□□□□ -1.87
COL1A2-208ENST00000481570 LCE2AQ5TA79 106 aaPredicted RBP3.39□□□□□ -1.87
COL1A2-208ENST00000481570 KRTAP9-6A0A140TA67 174 aa3.39□□□□□ -1.87
COL1A2-208ENST00000481570 FAT4Q6V0I7 4981 aa3.38□□□□□ -1.87
COL1A2-208ENST00000481570 KRTAP19-7Q3SYF9 63 aa3.37□□□□□ -1.87
COL1A2-208ENST00000481570 KRTAP4-9Q9BYQ8 210 aa3.35□□□□□ -1.87
COL1A2-208ENST00000481570 RNF213Q63HN8 5207 aa3.33□□□□□ -1.88
COL1A2-208ENST00000481570 HMCN2Q8NDA2 5059 aa3.32□□□□□ -1.88
COL1A2-208ENST00000481570 SYNE2Q8WXH0 6885 aaKnown RBP3.3□□□□□ -1.88
COL1A2-208ENST00000481570 MT1AP04731 61 aa3.29□□□□□ -1.88
COL1A2-208ENST00000481570 UBR4Q5T4S7 5183 aa3.27□□□□□ -1.89
COL1A2-208ENST00000481570 KRTAP20-1Q3LI63 56 aa3.26□□□□□ -1.89
COL1A2-208ENST00000481570 KRTAP2-3P0C7H8 128 aa3.25□□□□□ -1.89
COL1A2-208ENST00000481570 KRTAP2-4Q9BYR9 128 aa3.25□□□□□ -1.89
COL1A2-208ENST00000481570 KRTAP2-1Q9BYU5 128 aa3.25□□□□□ -1.89
COL1A2-208ENST00000481570 LCE5AQ5TCM9 118 aa3.23□□□□□ -1.89
COL1A2-208ENST00000481570 KRTAP9-7A8MTY7 169 aa3.21□□□□□ -1.9
COL1A2-208ENST00000481570 MUC2Q02817 5179 aa3.21□□□□□ -1.9
COL1A2-208ENST00000481570 KRTAP6-1Q3LI64 71 aa3.16□□□□□ -1.9
COL1A2-208ENST00000481570 KRTAP6-2Q3LI66 62 aa3.14□□□□□ -1.91
COL1A2-208ENST00000481570 KRTAP6-3Q3LI67 103 aa3.13□□□□□ -1.91
COL1A2-208ENST00000481570 SYNE1Q8NF91 8797 aaKnown RBP3.13□□□□□ -1.91
COL1A2-208ENST00000481570 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.1□□□□□ -1.91
COL1A2-208ENST00000481570 KRTAP9-6A8MVA2 160 aa3.09□□□□□ -1.91
COL1A2-208ENST00000481570 LCE1AQ5T7P2 110 aa3.08□□□□□ -1.92
COL1A2-208ENST00000481570 KRTAP9-4Q9BYQ2 154 aa3.07□□□□□ -1.92
COL1A2-208ENST00000481570 LCE4AQ5TA78 99 aa3□□□□□ -1.93
COL1A2-208ENST00000481570 KRTAP2-2Q9BYT5 123 aa2.98□□□□□ -1.93
COL1A2-208ENST00000481570 OBSCNQ5VST9 7968 aa2.97□□□□□ -1.93
COL1A2-208ENST00000481570 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
COL1A2-208ENST00000481570 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
COL1A2-208ENST00000481570 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
COL1A2-208ENST00000481570 USH2AO75445 5202 aa2.82□□□□□ -1.96
COL1A2-208ENST00000481570 KMT2DO14686 5537 aa2.78□□□□□ -1.96
COL1A2-208ENST00000481570 FCGBPQ9Y6R7 5405 aaPredicted RBP2.77□□□□□ -1.97
COL1A2-208ENST00000481570 MACF1Q9UPN3 7388 aaKnown RBP2.7□□□□□ -1.98
COL1A2-208ENST00000481570 KRTAP9-9Q9BYP9 154 aa2.69□□□□□ -1.98
COL1A2-208ENST00000481570 DSTQ03001 7570 aaKnown RBP2.68□□□□□ -1.98
COL1A2-208ENST00000481570 KRTAP4-6Q9BYQ5 205 aa2.66□□□□□ -1.98
COL1A2-208ENST00000481570 NEBP20929 6669 aa2.65□□□□□ -1.98
COL1A2-208ENST00000481570 SSPOA2VEC9 5147 aa2.63□□□□□ -1.99
COL1A2-208ENST00000481570 KRTAP5-9P26371 169 aa2.61□□□□□ -1.99
COL1A2-208ENST00000481570 KRTAP4-11Q9BYQ6 195 aa2.57□□□□□ -2
COL1A2-208ENST00000481570 KRTAP20-2Q3LI61 65 aa2.56□□□□□ -2
COL1A2-208ENST00000481570 MUC12Q9UKN1 5478 aa2.47□□□□□ -2.01
COL1A2-208ENST00000481570 KRTAP4-4Q9BYR3 166 aa2.46□□□□□ -2.01
COL1A2-208ENST00000481570 KRTAP4-12Q9BQ66 201 aa2.44□□□□□ -2.02
COL1A2-208ENST00000481570 KRTAP4-2Q9BYR5 136 aa2.44□□□□□ -2.02
COL1A2-208ENST00000481570 KRTAP5-4Q6L8H1 288 aa2.35□□□□□ -2.03
COL1A2-208ENST00000481570 MDN1Q9NU22 5596 aa2.33□□□□□ -2.04
COL1A2-208ENST00000481570 KRTAP5-5Q701N2 237 aaPredicted RBP2.27□□□□□ -2.05
COL1A2-208ENST00000481570 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
COL1A2-208ENST00000481570 GPR98Q8WXG9 6306 aa2.18□□□□□ -2.06
COL1A2-208ENST00000481570 KRTAP5-3Q6L8H2 238 aa2.06□□□□□ -2.08
COL1A2-208ENST00000481570 MUC5ACP98088 5654 aa2.03□□□□□ -2.08
COL1A2-208ENST00000481570 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
COL1A2-208ENST00000481570 HMCN1Q96RW7 5635 aa1.86□□□□□ -2.11
COL1A2-208ENST00000481570 KRTAP5-10Q6L8G5 202 aa1.8□□□□□ -2.12
COL1A2-208ENST00000481570 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
COL1A2-208ENST00000481570 AHNAK2Q8IVF2 5795 aa1.77□□□□□ -2.13
COL1A2-208ENST00000481570 KRTAP5-2Q701N4 177 aa1.76□□□□□ -2.13
COL1A2-208ENST00000481570 MUC5BQ9HC84 5762 aaPredicted RBP1.68□□□□□ -2.14
COL1A2-208ENST00000481570 KRTAP5-1Q6L8H4 278 aa1.65□□□□□ -2.15
COL1A2-208ENST00000481570 KRTAP5-11Q6L8G4 156 aa1.59□□□□□ -2.15
COL1A2-208ENST00000481570 AHNAKQ09666 5890 aaKnown RBP1.57□□□□□ -2.16
COL1A2-208ENST00000481570 KRTAP21-2Q3LI59 83 aa1.55□□□□□ -2.16
COL1A2-208ENST00000481570 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.45□□□□□ -2.18
COL1A2-208ENST00000481570 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
COL1A2-208ENST00000481570 KRTAP5-7Q6L8G8 165 aa1.3□□□□□ -2.2
COL1A2-208ENST00000481570 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 156.4 ms