RNA–Protein interactions for RNA: ENST00000480825.6

CSF3R-210, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 2

Gene CSF3R, Length 6,074 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-210ENST00000480825 KRTAP4-3Q9BYR4 195 aa3.41□□□□□ -1.86
CSF3R-210ENST00000480825 TNXBP22105 4242 aa3.4□□□□□ -1.87
CSF3R-210ENST00000480825 KRTAP9-6A0A140TA67 174 aa3.38□□□□□ -1.87
CSF3R-210ENST00000480825 KRTAP4-6Q9BYQ5 205 aa3.38□□□□□ -1.87
CSF3R-210ENST00000480825 LRP2P98164 4655 aa3.36□□□□□ -1.87
CSF3R-210ENST00000480825 MT1AP04731 61 aa3.34□□□□□ -1.87
CSF3R-210ENST00000480825 KRTAP4-9Q9BYQ8 210 aa3.32□□□□□ -1.88
CSF3R-210ENST00000480825 EPPK1P58107 5090 aaKnown RBP3.31□□□□□ -1.88
CSF3R-210ENST00000480825 KRTAP19-2Q3LHN2 52 aa3.31□□□□□ -1.88
CSF3R-210ENST00000480825 KRTAP19-6Q3LI70 58 aa3.3□□□□□ -1.88
CSF3R-210ENST00000480825 KRTAP2-3P0C7H8 128 aa3.29□□□□□ -1.88
CSF3R-210ENST00000480825 LCE5AQ5TCM9 118 aa3.29□□□□□ -1.88
CSF3R-210ENST00000480825 KRTAP2-4Q9BYR9 128 aa3.29□□□□□ -1.88
CSF3R-210ENST00000480825 KRTAP2-1Q9BYU5 128 aa3.29□□□□□ -1.88
CSF3R-210ENST00000480825 MUC17Q685J3 4493 aa3.27□□□□□ -1.89
CSF3R-210ENST00000480825 FSIP2Q5CZC0 6907 aa3.27□□□□□ -1.89
CSF3R-210ENST00000480825 KRTAP19-7Q3SYF9 63 aa3.22□□□□□ -1.89
CSF3R-210ENST00000480825 SYNE1Q8NF91 8797 aaKnown RBP3.21□□□□□ -1.9
CSF3R-210ENST00000480825 KRTAP6-2Q3LI66 62 aa3.19□□□□□ -1.9
CSF3R-210ENST00000480825 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.18□□□□□ -1.9
CSF3R-210ENST00000480825 KRTAP9-7A8MTY7 169 aa3.18□□□□□ -1.9
CSF3R-210ENST00000480825 KRTAP20-1Q3LI63 56 aa3.17□□□□□ -1.9
CSF3R-210ENST00000480825 FLGP20930 4061 aaPredicted RBP3.17□□□□□ -1.9
CSF3R-210ENST00000480825 ABCA13Q86UQ4 5058 aa3.15□□□□□ -1.91
CSF3R-210ENST00000480825 UBR4Q5T4S7 5183 aa3.1□□□□□ -1.91
CSF3R-210ENST00000480825 LCE4AQ5TA78 99 aa3.09□□□□□ -1.92
CSF3R-210ENST00000480825 KRTAP6-1Q3LI64 71 aa3.08□□□□□ -1.92
CSF3R-210ENST00000480825 KRTAP9-4Q9BYQ2 154 aa3.06□□□□□ -1.92
CSF3R-210ENST00000480825 SYNE2Q8WXH0 6885 aaKnown RBP3.06□□□□□ -1.92
CSF3R-210ENST00000480825 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
CSF3R-210ENST00000480825 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
CSF3R-210ENST00000480825 LCE1FQ5T754 118 aa3.05□□□□□ -1.92
CSF3R-210ENST00000480825 LCE1AQ5T7P2 110 aa3.05□□□□□ -1.92
CSF3R-210ENST00000480825 FAT4Q6V0I7 4981 aa3.03□□□□□ -1.92
CSF3R-210ENST00000480825 KRTAP9-6A8MVA2 160 aa3□□□□□ -1.93
CSF3R-210ENST00000480825 MUC2Q02817 5179 aa2.99□□□□□ -1.93
CSF3R-210ENST00000480825 RNF213Q63HN8 5207 aa2.98□□□□□ -1.93
CSF3R-210ENST00000480825 KRTAP9-9Q9BYP9 154 aa2.98□□□□□ -1.93
CSF3R-210ENST00000480825 OBSCNQ5VST9 7968 aa2.98□□□□□ -1.93
CSF3R-210ENST00000480825 KRTAP6-3Q3LI67 103 aa2.95□□□□□ -1.94
CSF3R-210ENST00000480825 KRTAP4-12Q9BQ66 201 aa2.94□□□□□ -1.94
CSF3R-210ENST00000480825 KRTAP2-2Q9BYT5 123 aa2.93□□□□□ -1.94
CSF3R-210ENST00000480825 HMCN2Q8NDA2 5059 aa2.92□□□□□ -1.94
CSF3R-210ENST00000480825 KRTAP4-11Q9BYQ6 195 aa2.7□□□□□ -1.98
CSF3R-210ENST00000480825 KRTAP4-2Q9BYR5 136 aa2.63□□□□□ -1.99
CSF3R-210ENST00000480825 DSTQ03001 7570 aaKnown RBP2.55□□□□□ -2
CSF3R-210ENST00000480825 USH2AO75445 5202 aa2.54□□□□□ -2
CSF3R-210ENST00000480825 MACF1Q9UPN3 7388 aaKnown RBP2.53□□□□□ -2
CSF3R-210ENST00000480825 NEBP20929 6669 aa2.52□□□□□ -2.01
CSF3R-210ENST00000480825 FCGBPQ9Y6R7 5405 aaPredicted RBP2.49□□□□□ -2.01
CSF3R-210ENST00000480825 KRTAP20-2Q3LI61 65 aa2.48□□□□□ -2.01
CSF3R-210ENST00000480825 KMT2DO14686 5537 aa2.48□□□□□ -2.01
CSF3R-210ENST00000480825 KRTAP4-4Q9BYR3 166 aa2.42□□□□□ -2.02
CSF3R-210ENST00000480825 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
CSF3R-210ENST00000480825 KRTAP5-3Q6L8H2 238 aa2.4□□□□□ -2.03
CSF3R-210ENST00000480825 KRTAP5-9P26371 169 aa2.36□□□□□ -2.03
CSF3R-210ENST00000480825 SSPOA2VEC9 5147 aa2.34□□□□□ -2.03
CSF3R-210ENST00000480825 GPR98Q8WXG9 6306 aa2.33□□□□□ -2.04
CSF3R-210ENST00000480825 MUC12Q9UKN1 5478 aa2.32□□□□□ -2.04
CSF3R-210ENST00000480825 KRTAP5-5Q701N2 237 aaPredicted RBP2.27□□□□□ -2.05
CSF3R-210ENST00000480825 MDN1Q9NU22 5596 aa2.27□□□□□ -2.05
CSF3R-210ENST00000480825 KRTAP5-4Q6L8H1 288 aa2.16□□□□□ -2.06
CSF3R-210ENST00000480825 MUC5ACP98088 5654 aa1.87□□□□□ -2.11
CSF3R-210ENST00000480825 AHNAK2Q8IVF2 5795 aa1.84□□□□□ -2.12
CSF3R-210ENST00000480825 KRTAP5-8O75690 187 aa1.82□□□□□ -2.12
CSF3R-210ENST00000480825 KRTAP5-10Q6L8G5 202 aa1.79□□□□□ -2.12
CSF3R-210ENST00000480825 KRTAP5-11Q6L8G4 156 aa1.76□□□□□ -2.13
CSF3R-210ENST00000480825 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
CSF3R-210ENST00000480825 KRTAP5-2Q701N4 177 aa1.75□□□□□ -2.13
CSF3R-210ENST00000480825 HMCN1Q96RW7 5635 aa1.74□□□□□ -2.13
CSF3R-210ENST00000480825 KRTAP5-1Q6L8H4 278 aa1.65□□□□□ -2.15
CSF3R-210ENST00000480825 AHNAKQ09666 5890 aaKnown RBP1.6□□□□□ -2.15
CSF3R-210ENST00000480825 MUC5BQ9HC84 5762 aaPredicted RBP1.59□□□□□ -2.16
CSF3R-210ENST00000480825 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.54□□□□□ -2.16
CSF3R-210ENST00000480825 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
CSF3R-210ENST00000480825 KRTAP5-7Q6L8G8 165 aa1.46□□□□□ -2.18
CSF3R-210ENST00000480825 KRTAP21-2Q3LI59 83 aa1.44□□□□□ -2.18
CSF3R-210ENST00000480825 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 12.9 ms