RNA–Protein interactions for RNA: ENST00000480825.6

CSF3R-210, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 2

Gene CSF3R, Length 6,074 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-210ENST00000480825 DCAF8L2P0C7V8 631 aa19.42■□□□□ 0.7
CSF3R-210ENST00000480825 PELP1Q8IZL8 1130 aaKnown RBP19■□□□□ 0.63
CSF3R-210ENST00000480825 SUPT5HO00267 1087 aaKnown RBP18.64■□□□□ 0.57
CSF3R-210ENST00000480825 EHMT2Q96KQ7 1210 aa18.31■□□□□ 0.52
CSF3R-210ENST00000480825 ERICH6Q7L0X2 663 aa18.27■□□□□ 0.52
CSF3R-210ENST00000480825 APLP2Q06481 763 aa18.12■□□□□ 0.49
CSF3R-210ENST00000480825 CCER1Q8TC90 406 aaPredicted RBP18.12■□□□□ 0.49
CSF3R-210ENST00000480825 CENPBP07199 599 aaPredicted RBP18.03■□□□□ 0.48
CSF3R-210ENST00000480825 SHROOM4Q9ULL8 1493 aa18.01■□□□□ 0.47
CSF3R-210ENST00000480825 MYT1Q01538 1121 aa17.96■□□□□ 0.47
CSF3R-210ENST00000480825 PCGF6Q9BYE7 350 aa17.83■□□□□ 0.44
CSF3R-210ENST00000480825 TTBK1Q5TCY1 1321 aaPredicted RBP17.78■□□□□ 0.44
CSF3R-210ENST00000480825 ZEB1P37275 1124 aaPredicted RBP17.73■□□□□ 0.43
CSF3R-210ENST00000480825 FAM9AQ8IZU1 332 aaPredicted RBP17.68■□□□□ 0.42
CSF3R-210ENST00000480825 NEFLP07196 543 aa17.68■□□□□ 0.42
CSF3R-210ENST00000480825 YTHDC1Q96MU7 727 aaKnown RBP17.52■□□□□ 0.4
CSF3R-210ENST00000480825 RANGAP1P46060 587 aaPredicted RBP17.4■□□□□ 0.38
CSF3R-210ENST00000480825 DAXXQ9UER7 740 aaPredicted RBP17.32■□□□□ 0.36
CSF3R-210ENST00000480825 NISCHQ9Y2I1 1504 aa17.32■□□□□ 0.36
CSF3R-210ENST00000480825 ATP1B4Q9UN42 357 aaPredicted RBP17.31■□□□□ 0.36
CSF3R-210ENST00000480825 TRIM41Q8WV44 630 aa17.21■□□□□ 0.34
CSF3R-210ENST00000480825 UBTFP17480 764 aaKnown RBP17.13■□□□□ 0.33
CSF3R-210ENST00000480825 RTL5Q5HYW3 569 aaPredicted RBP16.99■□□□□ 0.31
CSF3R-210ENST00000480825 PPARGC1BQ86YN6 1023 aaKnown RBP16.93■□□□□ 0.3
CSF3R-210ENST00000480825 HRCP23327 699 aa16.92■□□□□ 0.3
CSF3R-210ENST00000480825 TRIM26Q12899 539 aaPredicted RBP16.92■□□□□ 0.3
CSF3R-210ENST00000480825 POLR3GLQ9BT43 218 aa16.92■□□□□ 0.3
CSF3R-210ENST00000480825 ZNF316A6NFI3 1004 aaPredicted RBP16.9■□□□□ 0.3
CSF3R-210ENST00000480825 CLSPNQ9HAW4 1339 aa16.77■□□□□ 0.28
CSF3R-210ENST00000480825 CNGB1Q14028 1251 aaPredicted RBP16.75■□□□□ 0.27
CSF3R-210ENST00000480825 ITGAEP38570 1179 aa16.74■□□□□ 0.27
CSF3R-210ENST00000480825 MYT1LQ9UL68 1186 aa16.68■□□□□ 0.26
CSF3R-210ENST00000480825 HNRNPUL2Q1KMD3 747 aaKnown RBP16.61■□□□□ 0.25
CSF3R-210ENST00000480825 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.58■□□□□ 0.24
CSF3R-210ENST00000480825 DIEXFQ68CQ4 756 aaKnown RBP16.58■□□□□ 0.24
CSF3R-210ENST00000480825 SLC4A1APQ9BWU0 796 aaKnown RBP16.57■□□□□ 0.24
CSF3R-210ENST00000480825 BCANQ96GW7 911 aa16.48■□□□□ 0.23
CSF3R-210ENST00000480825 CDK11AQ9UQ88 783 aaPredicted RBP16.45■□□□□ 0.22
CSF3R-210ENST00000480825 GTF3C3Q9Y5Q9 886 aa16.42■□□□□ 0.22
CSF3R-210ENST00000480825 CHIC1Q5VXU3 224 aa16.41■□□□□ 0.22
CSF3R-210ENST00000480825 LOC105371045A0A1W2PR82 267 aa16.39■□□□□ 0.21
CSF3R-210ENST00000480825 ZBTB47Q9UFB7 747 aaPredicted RBP16.37■□□□□ 0.21
CSF3R-210ENST00000480825 ANP32CO43423 234 aa16.27■□□□□ 0.2
CSF3R-210ENST00000480825 EIF5BO60841 1220 aaKnown RBP16.26■□□□□ 0.19
CSF3R-210ENST00000480825 ANP32AP39687 249 aaKnown RBP16.24■□□□□ 0.19
CSF3R-210ENST00000480825 FAM50AQ14320 339 aaKnown RBP16.22■□□□□ 0.19
CSF3R-210ENST00000480825 TRIM52Q96A61 297 aa16.22■□□□□ 0.19
CSF3R-210ENST00000480825 NEUROD1Q13562 356 aa16.21■□□□□ 0.19
CSF3R-210ENST00000480825 CANXP27824 592 aaKnown RBP16.21■□□□□ 0.19
CSF3R-210ENST00000480825 BCL11AQ9H165 835 aa16.16■□□□□ 0.18
CSF3R-210ENST00000480825 GLIPR1L2Q4G1C9 344 aa16.15■□□□□ 0.18
CSF3R-210ENST00000480825 ANP32BQ92688 251 aaKnown RBP16.14■□□□□ 0.17
CSF3R-210ENST00000480825 NPM2Q86SE8 214 aaKnown RBP16.11■□□□□ 0.17
CSF3R-210ENST00000480825 ZNF326Q5BKZ1 582 aaKnown RBP16.11■□□□□ 0.17
CSF3R-210ENST00000480825 ACIN1Q9UKV3 1341 aaKnown RBP16.08■□□□□ 0.16
CSF3R-210ENST00000480825 SLC24A1O60721 1099 aa16.06■□□□□ 0.16
CSF3R-210ENST00000480825 NEFMP07197 916 aa16.02■□□□□ 0.16
CSF3R-210ENST00000480825 HSP90AA1P07900 732 aaKnown RBP15.97■□□□□ 0.15
CSF3R-210ENST00000480825 UPF2Q9HAU5 1272 aaKnown RBP15.91■□□□□ 0.14
CSF3R-210ENST00000480825 FKBP8Q14318 412 aa15.9■□□□□ 0.14
CSF3R-210ENST00000480825 NBR1Q14596 966 aa15.83■□□□□ 0.12
CSF3R-210ENST00000480825 ARXQ96QS3 562 aa15.78■□□□□ 0.12
CSF3R-210ENST00000480825 HNRNPUQ00839 825 aaKnown RBP eCLIP15.73■□□□□ 0.11
CSF3R-210ENST00000480825 CCDC136Q96JN2 1154 aa15.7■□□□□ 0.1
CSF3R-210ENST00000480825 FAM9BQ8IZU0 186 aa15.67■□□□□ 0.1
CSF3R-210ENST00000480825 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.67■□□□□ 0.1
CSF3R-210ENST00000480825 CDK11BP21127 795 aaKnown RBP15.61■□□□□ 0.09
CSF3R-210ENST00000480825 SALL2Q9Y467 1007 aaPredicted RBP15.61■□□□□ 0.09
CSF3R-210ENST00000480825 TONSLQ96HA7 1378 aa15.59■□□□□ 0.09
CSF3R-210ENST00000480825 TNNT2P45379 298 aaPredicted RBP15.59■□□□□ 0.09
CSF3R-210ENST00000480825 TRIM44Q96DX7 344 aaPredicted RBP15.59■□□□□ 0.09
CSF3R-210ENST00000480825 DDX10Q13206 875 aaKnown RBP15.57■□□□□ 0.08
CSF3R-210ENST00000480825 FBLN2P98095 1184 aa15.55■□□□□ 0.08
CSF3R-210ENST00000480825 ZNF777Q9ULD5 760 aaPredicted RBP15.55■□□□□ 0.08
CSF3R-210ENST00000480825 ARID3CA6NKF2 412 aa15.53■□□□□ 0.08
CSF3R-210ENST00000480825 TMC1Q8TDI8 760 aa15.53■□□□□ 0.08
CSF3R-210ENST00000480825 DDRGK1Q96HY6 314 aa15.52■□□□□ 0.08
CSF3R-210ENST00000480825 P3H3Q8IVL6 736 aa15.52■□□□□ 0.08
CSF3R-210ENST00000480825 ANP32EQ9BTT0 268 aa15.52■□□□□ 0.07
CSF3R-210ENST00000480825 NCLP19338 710 aaKnown RBP15.51■□□□□ 0.07
CSF3R-210ENST00000480825 BECN1Q14457 450 aa15.5■□□□□ 0.07
CSF3R-210ENST00000480825 WDR43Q15061 677 aaKnown RBP eCLIP15.5■□□□□ 0.07
CSF3R-210ENST00000480825 MYH16Q9H6N6 1097 aa15.48■□□□□ 0.07
CSF3R-210ENST00000480825 IRX6P78412 446 aaPredicted RBP15.47■□□□□ 0.07
CSF3R-210ENST00000480825 GOLGA6L22H0YM25 854 aa15.47■□□□□ 0.07
CSF3R-210ENST00000480825 CHGAP10645 457 aaKnown RBP15.47■□□□□ 0.07
CSF3R-210ENST00000480825 MRS2Q9HD23 443 aa15.45■□□□□ 0.06
CSF3R-210ENST00000480825 SCAF1Q9H7N4 1312 aaKnown RBP15.45■□□□□ 0.06
CSF3R-210ENST00000480825 PTMAP06454 111 aaKnown RBP15.44■□□□□ 0.06
CSF3R-210ENST00000480825 STAG3Q9UJ98 1225 aa15.43■□□□□ 0.06
CSF3R-210ENST00000480825 ESF1Q9H501 851 aaKnown RBP15.42■□□□□ 0.06
CSF3R-210ENST00000480825 DNTTIP2Q5QJE6 756 aaKnown RBP15.41■□□□□ 0.06
CSF3R-210ENST00000480825 ERICH6BQ5W0A0 696 aa15.4■□□□□ 0.06
CSF3R-210ENST00000480825 CSRNP3Q8WYN3 585 aa15.39■□□□□ 0.05
CSF3R-210ENST00000480825 NAP1L5Q96NT1 182 aaPredicted RBP15.38■□□□□ 0.05
CSF3R-210ENST00000480825 ZRSR1Q15695 479 aaKnown RBP15.36■□□□□ 0.05
CSF3R-210ENST00000480825 PPM1GO15355 546 aaPredicted RBP15.34■□□□□ 0.05
CSF3R-210ENST00000480825 MIER1Q8N108 512 aa15.33■□□□□ 0.04
CSF3R-210ENST00000480825 PABPN1Q86U42 306 aaKnown RBP eCLIP15.31■□□□□ 0.044e-7■■□□□ 12.2
CSF3R-210ENST00000480825 RTN4Q9NQC3 1192 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms