RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 MUC17Q685J3 4493 aa5.32□□□□□ -1.56
LPCAT1-202ENST00000475622 LCE1BQ5T7P3 118 aa5.31□□□□□ -1.56
LPCAT1-202ENST00000475622 KRTAP19-6Q3LI70 58 aa5.28□□□□□ -1.56
LPCAT1-202ENST00000475622 PKHD1P08F94 4074 aa5.28□□□□□ -1.56
LPCAT1-202ENST00000475622 LCE1DQ5T752 114 aa5.27□□□□□ -1.57
LPCAT1-202ENST00000475622 FLGP20930 4061 aaPredicted RBP5.24□□□□□ -1.57
LPCAT1-202ENST00000475622 ABCA13Q86UQ4 5058 aa5.2□□□□□ -1.58
LPCAT1-202ENST00000475622 KRTAP19-7Q3SYF9 63 aa5.14□□□□□ -1.59
LPCAT1-202ENST00000475622 MT1AP04731 61 aa5.12□□□□□ -1.59
LPCAT1-202ENST00000475622 KRTAP4-9Q9BYQ8 210 aa5.12□□□□□ -1.59
LPCAT1-202ENST00000475622 KRTAP9-2Q9BYQ4 174 aa5.09□□□□□ -1.59
LPCAT1-202ENST00000475622 FSIP2Q5CZC0 6907 aa5.08□□□□□ -1.6
LPCAT1-202ENST00000475622 UBR4Q5T4S7 5183 aa5.08□□□□□ -1.6
LPCAT1-202ENST00000475622 KRTAP2-3P0C7H8 128 aa5.05□□□□□ -1.6
LPCAT1-202ENST00000475622 KRTAP2-4Q9BYR9 128 aa5.05□□□□□ -1.6
LPCAT1-202ENST00000475622 KRTAP2-1Q9BYU5 128 aa5.05□□□□□ -1.6
LPCAT1-202ENST00000475622 TNXBP22105 4242 aa5.05□□□□□ -1.6
LPCAT1-202ENST00000475622 OBSCNQ5VST9 7968 aa5.01□□□□□ -1.61
LPCAT1-202ENST00000475622 RNF213Q63HN8 5207 aa4.98□□□□□ -1.61
LPCAT1-202ENST00000475622 MUC2Q02817 5179 aa4.94□□□□□ -1.62
LPCAT1-202ENST00000475622 LCE5AQ5TCM9 118 aa4.94□□□□□ -1.62
LPCAT1-202ENST00000475622 FAT4Q6V0I7 4981 aa4.92□□□□□ -1.62
LPCAT1-202ENST00000475622 SYNE2Q8WXH0 6885 aaKnown RBP4.91□□□□□ -1.62
LPCAT1-202ENST00000475622 HMCN2Q8NDA2 5059 aa4.9□□□□□ -1.62
LPCAT1-202ENST00000475622 LCE2AQ5TA79 106 aaPredicted RBP4.9□□□□□ -1.63
LPCAT1-202ENST00000475622 KRTAP6-1Q3LI64 71 aa4.8□□□□□ -1.64
LPCAT1-202ENST00000475622 KRTAP6-2Q3LI66 62 aa4.78□□□□□ -1.64
LPCAT1-202ENST00000475622 KRTAP9-6A8MVA2 160 aa4.77□□□□□ -1.65
LPCAT1-202ENST00000475622 KRTAP9-6A0A140TA67 174 aa4.76□□□□□ -1.65
LPCAT1-202ENST00000475622 LCE1AQ5T7P2 110 aa4.71□□□□□ -1.66
LPCAT1-202ENST00000475622 KRTAP20-1Q3LI63 56 aa4.69□□□□□ -1.66
LPCAT1-202ENST00000475622 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
LPCAT1-202ENST00000475622 KRTAP9-7A8MTY7 169 aa4.59□□□□□ -1.67
LPCAT1-202ENST00000475622 KRTAP6-3Q3LI67 103 aa4.57□□□□□ -1.68
LPCAT1-202ENST00000475622 LCE1CQ5T751 118 aa4.53□□□□□ -1.68
LPCAT1-202ENST00000475622 LCE1EQ5T753 118 aa4.53□□□□□ -1.68
LPCAT1-202ENST00000475622 LCE1FQ5T754 118 aa4.53□□□□□ -1.68
LPCAT1-202ENST00000475622 LCE4AQ5TA78 99 aa4.52□□□□□ -1.69
LPCAT1-202ENST00000475622 FCGBPQ9Y6R7 5405 aaPredicted RBP4.47□□□□□ -1.69
LPCAT1-202ENST00000475622 USH2AO75445 5202 aa4.43□□□□□ -1.7
LPCAT1-202ENST00000475622 DSTQ03001 7570 aaKnown RBP4.41□□□□□ -1.7
LPCAT1-202ENST00000475622 KRTAP2-2Q9BYT5 123 aa4.39□□□□□ -1.71
LPCAT1-202ENST00000475622 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.38□□□□□ -1.71
LPCAT1-202ENST00000475622 MACF1Q9UPN3 7388 aaKnown RBP4.31□□□□□ -1.72
LPCAT1-202ENST00000475622 MUC19Q7Z5P9 8384 aa4.12□□□□□ -1.75
LPCAT1-202ENST00000475622 KRTAP4-11Q9BYQ6 195 aa4.04□□□□□ -1.76
LPCAT1-202ENST00000475622 KRTAP9-9Q9BYP9 154 aa4.03□□□□□ -1.76
LPCAT1-202ENST00000475622 KMT2DO14686 5537 aa4□□□□□ -1.77
LPCAT1-202ENST00000475622 NEBP20929 6669 aa3.95□□□□□ -1.78
LPCAT1-202ENST00000475622 KRTAP4-6Q9BYQ5 205 aa3.87□□□□□ -1.79
LPCAT1-202ENST00000475622 MDN1Q9NU22 5596 aa3.84□□□□□ -1.79
LPCAT1-202ENST00000475622 SSPOA2VEC9 5147 aa3.83□□□□□ -1.8
LPCAT1-202ENST00000475622 KRTAP5-9P26371 169 aa3.8□□□□□ -1.8
LPCAT1-202ENST00000475622 KRTAP20-2Q3LI61 65 aa3.79□□□□□ -1.8
LPCAT1-202ENST00000475622 MUC12Q9UKN1 5478 aa3.74□□□□□ -1.81
LPCAT1-202ENST00000475622 GPR98Q8WXG9 6306 aa3.73□□□□□ -1.81
LPCAT1-202ENST00000475622 KRTAP4-4Q9BYR3 166 aa3.71□□□□□ -1.82
LPCAT1-202ENST00000475622 KRTAP4-12Q9BQ66 201 aa3.61□□□□□ -1.83
LPCAT1-202ENST00000475622 KRTAP4-2Q9BYR5 136 aa3.61□□□□□ -1.83
LPCAT1-202ENST00000475622 KRTAP5-5Q701N2 237 aaPredicted RBP3.54□□□□□ -1.84
LPCAT1-202ENST00000475622 KRTAP5-4Q6L8H1 288 aa3.43□□□□□ -1.86
LPCAT1-202ENST00000475622 MUC5ACP98088 5654 aa3.27□□□□□ -1.89
LPCAT1-202ENST00000475622 HMCN1Q96RW7 5635 aa3.15□□□□□ -1.91
LPCAT1-202ENST00000475622 KRTAP5-3Q6L8H2 238 aa3.01□□□□□ -1.93
LPCAT1-202ENST00000475622 AHNAK2Q8IVF2 5795 aa2.98□□□□□ -1.93
LPCAT1-202ENST00000475622 KRTAP5-10Q6L8G5 202 aa2.82□□□□□ -1.96
LPCAT1-202ENST00000475622 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
LPCAT1-202ENST00000475622 MUC5BQ9HC84 5762 aaPredicted RBP2.63□□□□□ -1.99
LPCAT1-202ENST00000475622 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
LPCAT1-202ENST00000475622 PHGR1C9JFL3 82 aa2.61□□□□□ -1.99
LPCAT1-202ENST00000475622 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
LPCAT1-202ENST00000475622 KRTAP5-1Q6L8H4 278 aa2.48□□□□□ -2.01
LPCAT1-202ENST00000475622 KRTAP5-11Q6L8G4 156 aa2.44□□□□□ -2.02
LPCAT1-202ENST00000475622 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
LPCAT1-202ENST00000475622 KRTAP21-1Q3LI58 79 aa2.21□□□□□ -2.06
LPCAT1-202ENST00000475622 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
LPCAT1-202ENST00000475622 KRTAP5-7Q6L8G8 165 aa1.9□□□□□ -2.1
LPCAT1-202ENST00000475622 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 12.2 ms