RNA–Protein interactions for RNA: ENST00000475488.3

SSPO-205, Transcript of SCO-spondin, humanhuman

TSL 1 (best)

Gene SSPO, Length 7,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-205ENST00000475488 LCE1EQ5T753 118 aa4.16□□□□□ -1.74
SSPO-205ENST00000475488 LCE1FQ5T754 118 aa4.16□□□□□ -1.74
SSPO-205ENST00000475488 LCE1AQ5T7P2 110 aa4.16□□□□□ -1.74
SSPO-205ENST00000475488 KRTAP19-2Q3LHN2 52 aa4.05□□□□□ -1.76
SSPO-205ENST00000475488 MUC17Q685J3 4493 aa4.04□□□□□ -1.76
SSPO-205ENST00000475488 HYDINQ4G0P3 5121 aa4.03□□□□□ -1.76
SSPO-205ENST00000475488 KRTAP9-7A8MTY7 169 aa4.02□□□□□ -1.77
SSPO-205ENST00000475488 KRTAP4-9Q9BYQ8 210 aa4.02□□□□□ -1.77
SSPO-205ENST00000475488 MT1AP04731 61 aa4.01□□□□□ -1.77
SSPO-205ENST00000475488 KIAA1109Q2LD37 5005 aa3.99□□□□□ -1.77
SSPO-205ENST00000475488 KRTAP2-3P0C7H8 128 aa3.98□□□□□ -1.77
SSPO-205ENST00000475488 KRTAP2-4Q9BYR9 128 aa3.98□□□□□ -1.77
SSPO-205ENST00000475488 KRTAP2-1Q9BYU5 128 aa3.98□□□□□ -1.77
SSPO-205ENST00000475488 LCE4AQ5TA78 99 aa3.97□□□□□ -1.77
SSPO-205ENST00000475488 HERC2O95714 4834 aa3.96□□□□□ -1.78
SSPO-205ENST00000475488 KMT2CQ8NEZ4 4911 aaKnown RBP3.95□□□□□ -1.78
SSPO-205ENST00000475488 RYR2Q92736 4967 aa3.95□□□□□ -1.78
SSPO-205ENST00000475488 SYNE2Q8WXH0 6885 aaKnown RBP3.93□□□□□ -1.78
SSPO-205ENST00000475488 KRTAP6-2Q3LI66 62 aa3.88□□□□□ -1.79
SSPO-205ENST00000475488 PCLOQ9Y6V0 5065 aa3.82□□□□□ -1.8
SSPO-205ENST00000475488 KRTAP6-3Q3LI67 103 aa3.81□□□□□ -1.8
SSPO-205ENST00000475488 KRTAP19-7Q3SYF9 63 aa3.8□□□□□ -1.8
SSPO-205ENST00000475488 KRTAP9-4Q9BYQ2 154 aa3.8□□□□□ -1.8
SSPO-205ENST00000475488 KRTAP2-2Q9BYT5 123 aa3.79□□□□□ -1.8
SSPO-205ENST00000475488 LCE2AQ5TA79 106 aaPredicted RBP3.75□□□□□ -1.81
SSPO-205ENST00000475488 KRTAP6-1Q3LI64 71 aa3.74□□□□□ -1.81
SSPO-205ENST00000475488 HERC1Q15751 4861 aa3.74□□□□□ -1.81
SSPO-205ENST00000475488 FSIP2Q5CZC0 6907 aa3.74□□□□□ -1.81
SSPO-205ENST00000475488 SYNE1Q8NF91 8797 aaKnown RBP3.73□□□□□ -1.81
SSPO-205ENST00000475488 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.71□□□□□ -1.82
SSPO-205ENST00000475488 KRTAP9-9Q9BYP9 154 aa3.71□□□□□ -1.82
SSPO-205ENST00000475488 BIRC6Q9NR09 4857 aa3.68□□□□□ -1.82
SSPO-205ENST00000475488 HMCN2Q8NDA2 5059 aa3.68□□□□□ -1.82
SSPO-205ENST00000475488 EPPK1P58107 5090 aaKnown RBP3.55□□□□□ -1.84
SSPO-205ENST00000475488 KRTAP9-6A8MVA2 160 aa3.48□□□□□ -1.85
SSPO-205ENST00000475488 MUC2Q02817 5179 aa3.47□□□□□ -1.85
SSPO-205ENST00000475488 OBSCNQ5VST9 7968 aa3.46□□□□□ -1.86
SSPO-205ENST00000475488 ABCA13Q86UQ4 5058 aa3.45□□□□□ -1.86
SSPO-205ENST00000475488 FAT4Q6V0I7 4981 aa3.42□□□□□ -1.86
SSPO-205ENST00000475488 UBR4Q5T4S7 5183 aa3.39□□□□□ -1.87
SSPO-205ENST00000475488 KRTAP20-2Q3LI61 65 aa3.35□□□□□ -1.87
SSPO-205ENST00000475488 KRTAP4-11Q9BYQ6 195 aa3.29□□□□□ -1.88
SSPO-205ENST00000475488 RNF213Q63HN8 5207 aa3.26□□□□□ -1.89
SSPO-205ENST00000475488 DSTQ03001 7570 aaKnown RBP3.17□□□□□ -1.9
SSPO-205ENST00000475488 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
SSPO-205ENST00000475488 KRTAP4-6Q9BYQ5 205 aa3.12□□□□□ -1.91
SSPO-205ENST00000475488 FCGBPQ9Y6R7 5405 aaPredicted RBP3.1□□□□□ -1.91
SSPO-205ENST00000475488 KMT2DO14686 5537 aa3.09□□□□□ -1.92
SSPO-205ENST00000475488 KRTAP4-12Q9BQ66 201 aa3.08□□□□□ -1.92
SSPO-205ENST00000475488 KRTAP4-2Q9BYR5 136 aa3.08□□□□□ -1.92
SSPO-205ENST00000475488 MACF1Q9UPN3 7388 aaKnown RBP2.96□□□□□ -1.94
SSPO-205ENST00000475488 KRTAP5-9P26371 169 aa2.88□□□□□ -1.95
SSPO-205ENST00000475488 USH2AO75445 5202 aa2.84□□□□□ -1.95
SSPO-205ENST00000475488 KRTAP5-4Q6L8H1 288 aa2.83□□□□□ -1.96
SSPO-205ENST00000475488 NEBP20929 6669 aa2.76□□□□□ -1.97
SSPO-205ENST00000475488 MUC19Q7Z5P9 8384 aa2.75□□□□□ -1.97
SSPO-205ENST00000475488 SSPOA2VEC9 5147 aa2.68□□□□□ -1.98
SSPO-205ENST00000475488 MUC12Q9UKN1 5478 aa2.62□□□□□ -1.99
SSPO-205ENST00000475488 KRTAP5-5Q701N2 237 aaPredicted RBP2.56□□□□□ -2
SSPO-205ENST00000475488 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
SSPO-205ENST00000475488 KRTAP5-3Q6L8H2 238 aa2.41□□□□□ -2.02
SSPO-205ENST00000475488 MDN1Q9NU22 5596 aa2.38□□□□□ -2.03
SSPO-205ENST00000475488 GPR98Q8WXG9 6306 aa2.24□□□□□ -2.05
SSPO-205ENST00000475488 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
SSPO-205ENST00000475488 KRTAP5-8O75690 187 aa2.22□□□□□ -2.05
SSPO-205ENST00000475488 KRTAP5-10Q6L8G5 202 aa2.03□□□□□ -2.08
SSPO-205ENST00000475488 HMCN1Q96RW7 5635 aa2.02□□□□□ -2.09
SSPO-205ENST00000475488 KRTAP5-2Q701N4 177 aa1.97□□□□□ -2.09
SSPO-205ENST00000475488 KRTAP5-1Q6L8H4 278 aa1.86□□□□□ -2.11
SSPO-205ENST00000475488 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
SSPO-205ENST00000475488 MUC5BQ9HC84 5762 aaPredicted RBP1.83□□□□□ -2.12
SSPO-205ENST00000475488 AHNAK2Q8IVF2 5795 aa1.75□□□□□ -2.13
SSPO-205ENST00000475488 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
SSPO-205ENST00000475488 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
SSPO-205ENST00000475488 AHNAKQ09666 5890 aaKnown RBP1.62□□□□□ -2.15
SSPO-205ENST00000475488 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.52□□□□□ -2.17
SSPO-205ENST00000475488 KRTAP5-7Q6L8G8 165 aa1.4□□□□□ -2.18
SSPO-205ENST00000475488 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 70.4 ms