RNA–Protein interactions for RNA: ENST00000475488.3

SSPO-205, Transcript of SCO-spondin, humanhuman

TSL 1 (best)

Gene SSPO, Length 7,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-205ENST00000475488 DCAF8L2P0C7V8 631 aa24.59■■□□□ 1.53
SSPO-205ENST00000475488 PELP1Q8IZL8 1130 aaKnown RBP22.93■■□□□ 1.26
SSPO-205ENST00000475488 SUPT5HO00267 1087 aaKnown RBP22.77■■□□□ 1.24
SSPO-205ENST00000475488 EHMT2Q96KQ7 1210 aa22.76■■□□□ 1.23
SSPO-205ENST00000475488 FAM9AQ8IZU1 332 aaPredicted RBP22.59■■□□□ 1.21
SSPO-205ENST00000475488 APLP2Q06481 763 aa22.49■■□□□ 1.19
SSPO-205ENST00000475488 SHROOM4Q9ULL8 1493 aa22.24■■□□□ 1.15
SSPO-205ENST00000475488 ERICH6Q7L0X2 663 aa22.16■■□□□ 1.14
SSPO-205ENST00000475488 TTBK1Q5TCY1 1321 aaPredicted RBP21.97■■□□□ 1.11
SSPO-205ENST00000475488 CCER1Q8TC90 406 aaPredicted RBP21.95■■□□□ 1.1
SSPO-205ENST00000475488 ATP1B4Q9UN42 357 aaPredicted RBP21.88■■□□□ 1.09
SSPO-205ENST00000475488 RANGAP1P46060 587 aaPredicted RBP21.8■■□□□ 1.08
SSPO-205ENST00000475488 PCGF6Q9BYE7 350 aa21.54■■□□□ 1.04
SSPO-205ENST00000475488 CENPBP07199 599 aaPredicted RBP21.45■■□□□ 1.03
SSPO-205ENST00000475488 NEFLP07196 543 aa21.41■■□□□ 1.02
SSPO-205ENST00000475488 MYT1LQ9UL68 1186 aa21.41■■□□□ 1.02
SSPO-205ENST00000475488 NISCHQ9Y2I1 1504 aa21.34■■□□□ 1.01
SSPO-205ENST00000475488 DAXXQ9UER7 740 aaPredicted RBP21.22■□□□□ 0.99
SSPO-205ENST00000475488 UBTFP17480 764 aaKnown RBP21.19■□□□□ 0.98
SSPO-205ENST00000475488 MYT1Q01538 1121 aa21.15■□□□□ 0.98
SSPO-205ENST00000475488 CHIC1Q5VXU3 224 aa21.1■□□□□ 0.97
SSPO-205ENST00000475488 ZEB1P37275 1124 aaPredicted RBP21.09■□□□□ 0.97
SSPO-205ENST00000475488 YTHDC1Q96MU7 727 aaKnown RBP21.08■□□□□ 0.97
SSPO-205ENST00000475488 POLR3GLQ9BT43 218 aa21.07■□□□□ 0.96
SSPO-205ENST00000475488 TRIM41Q8WV44 630 aa21.06■□□□□ 0.96
SSPO-205ENST00000475488 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21■□□□□ 0.95
SSPO-205ENST00000475488 HNRNPUL2Q1KMD3 747 aaKnown RBP21■□□□□ 0.95
SSPO-205ENST00000475488 SLC4A1APQ9BWU0 796 aaKnown RBP21■□□□□ 0.95
SSPO-205ENST00000475488 CNGB1Q14028 1251 aaPredicted RBP20.8■□□□□ 0.92
SSPO-205ENST00000475488 ITGAEP38570 1179 aa20.72■□□□□ 0.91
SSPO-205ENST00000475488 PPARGC1BQ86YN6 1023 aaKnown RBP20.66■□□□□ 0.9
SSPO-205ENST00000475488 ZNF316A6NFI3 1004 aaPredicted RBP20.64■□□□□ 0.9
SSPO-205ENST00000475488 CLSPNQ9HAW4 1339 aa20.63■□□□□ 0.89
SSPO-205ENST00000475488 SLC24A1O60721 1099 aa20.46■□□□□ 0.87
SSPO-205ENST00000475488 ZBTB47Q9UFB7 747 aaPredicted RBP20.38■□□□□ 0.85
SSPO-205ENST00000475488 RTL5Q5HYW3 569 aaPredicted RBP20.36■□□□□ 0.85
SSPO-205ENST00000475488 BCANQ96GW7 911 aa20.26■□□□□ 0.83
SSPO-205ENST00000475488 BCL11AQ9H165 835 aa20.23■□□□□ 0.83
SSPO-205ENST00000475488 TRIM26Q12899 539 aaPredicted RBP20.13■□□□□ 0.81
SSPO-205ENST00000475488 TRIM52Q96A61 297 aa20.13■□□□□ 0.81
SSPO-205ENST00000475488 FAM50AQ14320 339 aaKnown RBP20.11■□□□□ 0.81
SSPO-205ENST00000475488 NEFMP07197 916 aa20.05■□□□□ 0.8
SSPO-205ENST00000475488 CANXP27824 592 aaKnown RBP20.04■□□□□ 0.8
SSPO-205ENST00000475488 ZNF326Q5BKZ1 582 aaKnown RBP19.97■□□□□ 0.79
SSPO-205ENST00000475488 NEUROD1Q13562 356 aa19.92■□□□□ 0.78
SSPO-205ENST00000475488 FBLN2P98095 1184 aa19.91■□□□□ 0.78
SSPO-205ENST00000475488 HRCP23327 699 aa19.87■□□□□ 0.77
SSPO-205ENST00000475488 PLPPR3Q6T4P5 718 aa19.84■□□□□ 0.77
SSPO-205ENST00000475488 ESF1Q9H501 851 aaKnown RBP19.82■□□□□ 0.76
SSPO-205ENST00000475488 CDK11AQ9UQ88 783 aaPredicted RBP19.75■□□□□ 0.75
SSPO-205ENST00000475488 ANP32CO43423 234 aa19.74■□□□□ 0.75
SSPO-205ENST00000475488 DIEXFQ68CQ4 756 aaKnown RBP19.7■□□□□ 0.74
SSPO-205ENST00000475488 STAG3Q9UJ98 1225 aa19.68■□□□□ 0.74
SSPO-205ENST00000475488 LOC105371045A0A1W2PR82 267 aa19.67■□□□□ 0.74
SSPO-205ENST00000475488 ANP32BQ92688 251 aaKnown RBP19.63■□□□□ 0.73
SSPO-205ENST00000475488 HSP90AA1P07900 732 aaKnown RBP19.61■□□□□ 0.73
SSPO-205ENST00000475488 SCAF1Q9H7N4 1312 aaKnown RBP19.58■□□□□ 0.73
SSPO-205ENST00000475488 A0A0G2JS52 829 aa19.57■□□□□ 0.72
SSPO-205ENST00000475488 CDK11BP21127 795 aaKnown RBP19.55■□□□□ 0.72
SSPO-205ENST00000475488 CHGAP10645 457 aaKnown RBP19.52■□□□□ 0.72
SSPO-205ENST00000475488 ARID3CA6NKF2 412 aa19.52■□□□□ 0.71
SSPO-205ENST00000475488 ANP32AP39687 249 aaKnown RBP19.5■□□□□ 0.71
SSPO-205ENST00000475488 NPM2Q86SE8 214 aaKnown RBP19.49■□□□□ 0.71
SSPO-205ENST00000475488 ZNF777Q9ULD5 760 aaPredicted RBP19.49■□□□□ 0.71
SSPO-205ENST00000475488 PABPN1Q86U42 306 aaKnown RBP eCLIP19.47■□□□□ 0.71
SSPO-205ENST00000475488 UPF2Q9HAU5 1272 aaKnown RBP19.4■□□□□ 0.7
SSPO-205ENST00000475488 NPM1P06748 294 aaKnown RBP eCLIP19.36■□□□□ 0.69
SSPO-205ENST00000475488 P3H3Q8IVL6 736 aa19.35■□□□□ 0.69
SSPO-205ENST00000475488 ZBTB7CA1YPR0 619 aa19.29■□□□□ 0.68
SSPO-205ENST00000475488 PLEKHG5O94827 1062 aa19.27■□□□□ 0.68
SSPO-205ENST00000475488 EIF5BO60841 1220 aaKnown RBP19.27■□□□□ 0.68
SSPO-205ENST00000475488 ABCC9O60706 1549 aa19.26■□□□□ 0.67
SSPO-205ENST00000475488 TULP1O00294 542 aaPredicted RBP19.23■□□□□ 0.67
SSPO-205ENST00000475488 GTF3C3Q9Y5Q9 886 aa19.2■□□□□ 0.66
SSPO-205ENST00000475488 C14orf37Q86TY3 774 aa19.2■□□□□ 0.66
SSPO-205ENST00000475488 SALL2Q9Y467 1007 aaPredicted RBP19.15■□□□□ 0.66
SSPO-205ENST00000475488 HAP1P54257 671 aaPredicted RBP19.15■□□□□ 0.66
SSPO-205ENST00000475488 ARXQ96QS3 562 aa19.14■□□□□ 0.65
SSPO-205ENST00000475488 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.14■□□□□ 0.65
SSPO-205ENST00000475488 MYH16Q9H6N6 1097 aa19.14■□□□□ 0.65
SSPO-205ENST00000475488 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.11■□□□□ 0.65
SSPO-205ENST00000475488 GLIPR1L2Q4G1C9 344 aa19.09■□□□□ 0.65
SSPO-205ENST00000475488 WDR43Q15061 677 aaKnown RBP eCLIP19.08■□□□□ 0.64
SSPO-205ENST00000475488 SENP3Q9H4L4 574 aaPredicted RBP19.04■□□□□ 0.64
SSPO-205ENST00000475488 FAM9BQ8IZU0 186 aa19.03■□□□□ 0.64
SSPO-205ENST00000475488 NPHP1O15259 732 aa19.03■□□□□ 0.64
SSPO-205ENST00000475488 TONSLQ96HA7 1378 aa19.02■□□□□ 0.64
SSPO-205ENST00000475488 TMC1Q8TDI8 760 aa18.98■□□□□ 0.63
SSPO-205ENST00000475488 NCLP19338 710 aaKnown RBP18.97■□□□□ 0.63
SSPO-205ENST00000475488 PPP1R15AO75807 674 aaPredicted RBP18.97■□□□□ 0.63
SSPO-205ENST00000475488 NCBP3Q53F19 620 aaKnown RBP18.95■□□□□ 0.62
SSPO-205ENST00000475488 HNRNPUQ00839 825 aaKnown RBP eCLIP18.94■□□□□ 0.62
SSPO-205ENST00000475488 ZRSR1Q15695 479 aaKnown RBP18.94■□□□□ 0.62
SSPO-205ENST00000475488 FKBP8Q14318 412 aa18.93■□□□□ 0.62
SSPO-205ENST00000475488 KDM2AQ9Y2K7 1162 aa18.92■□□□□ 0.62
SSPO-205ENST00000475488 NBR1Q14596 966 aa18.9■□□□□ 0.62
SSPO-205ENST00000475488 ARID4BQ4LE39 1312 aaPredicted RBP18.9■□□□□ 0.62
SSPO-205ENST00000475488 CCDC136Q96JN2 1154 aa18.89■□□□□ 0.61
SSPO-205ENST00000475488 TAOK2Q9UL54 1235 aa18.83■□□□□ 0.61
SSPO-205ENST00000475488 TPRNQ4KMQ1 711 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms