RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 RYR2Q92736 4967 aa3.33□□□□□ -1.88
VAPB-204ENST00000475243 SYNE2Q8WXH0 6885 aaKnown RBP3.3□□□□□ -1.88
VAPB-204ENST00000475243 KRTAP19-6Q3LI70 58 aa3.28□□□□□ -1.88
VAPB-204ENST00000475243 MUC17Q685J3 4493 aa3.28□□□□□ -1.88
VAPB-204ENST00000475243 KRTAP20-1Q3LI63 56 aa3.27□□□□□ -1.89
VAPB-204ENST00000475243 KRTAP4-9Q9BYQ8 210 aa3.25□□□□□ -1.89
VAPB-204ENST00000475243 PCLOQ9Y6V0 5065 aa3.21□□□□□ -1.9
VAPB-204ENST00000475243 FSIP2Q5CZC0 6907 aa3.19□□□□□ -1.9
VAPB-204ENST00000475243 LCE5AQ5TCM9 118 aa3.17□□□□□ -1.9
VAPB-204ENST00000475243 KRTAP19-7Q3SYF9 63 aa3.14□□□□□ -1.91
VAPB-204ENST00000475243 KRTAP9-7A8MTY7 169 aa3.14□□□□□ -1.91
VAPB-204ENST00000475243 HERC1Q15751 4861 aa3.14□□□□□ -1.91
VAPB-204ENST00000475243 KRTAP2-3P0C7H8 128 aa3.11□□□□□ -1.91
VAPB-204ENST00000475243 KRTAP2-4Q9BYR9 128 aa3.11□□□□□ -1.91
VAPB-204ENST00000475243 KRTAP2-1Q9BYU5 128 aa3.11□□□□□ -1.91
VAPB-204ENST00000475243 HMCN2Q8NDA2 5059 aa3.11□□□□□ -1.91
VAPB-204ENST00000475243 BIRC6Q9NR09 4857 aa3.1□□□□□ -1.91
VAPB-204ENST00000475243 SYNE1Q8NF91 8797 aaKnown RBP3.09□□□□□ -1.91
VAPB-204ENST00000475243 MT1AP04731 61 aa3.09□□□□□ -1.92
VAPB-204ENST00000475243 LCE2AQ5TA79 106 aaPredicted RBP3.08□□□□□ -1.92
VAPB-204ENST00000475243 KRTAP6-2Q3LI66 62 aa3.01□□□□□ -1.93
VAPB-204ENST00000475243 KRTAP6-1Q3LI64 71 aa2.99□□□□□ -1.93
VAPB-204ENST00000475243 EPPK1P58107 5090 aaKnown RBP2.97□□□□□ -1.93
VAPB-204ENST00000475243 LCE1CQ5T751 118 aa2.93□□□□□ -1.94
VAPB-204ENST00000475243 LCE1EQ5T753 118 aa2.93□□□□□ -1.94
VAPB-204ENST00000475243 LCE1FQ5T754 118 aa2.93□□□□□ -1.94
VAPB-204ENST00000475243 LCE1AQ5T7P2 110 aa2.93□□□□□ -1.94
VAPB-204ENST00000475243 KRTAP9-6A8MVA2 160 aa2.92□□□□□ -1.94
VAPB-204ENST00000475243 MUC2Q02817 5179 aa2.92□□□□□ -1.94
VAPB-204ENST00000475243 KRTAP9-4Q9BYQ2 154 aa2.9□□□□□ -1.94
VAPB-204ENST00000475243 FAT4Q6V0I7 4981 aa2.9□□□□□ -1.95
VAPB-204ENST00000475243 UBR4Q5T4S7 5183 aa2.89□□□□□ -1.95
VAPB-204ENST00000475243 KRTAP6-3Q3LI67 103 aa2.87□□□□□ -1.95
VAPB-204ENST00000475243 OBSCNQ5VST9 7968 aa2.86□□□□□ -1.95
VAPB-204ENST00000475243 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.86□□□□□ -1.95
VAPB-204ENST00000475243 LCE4AQ5TA78 99 aa2.83□□□□□ -1.96
VAPB-204ENST00000475243 KRTAP2-2Q9BYT5 123 aa2.8□□□□□ -1.96
VAPB-204ENST00000475243 ABCA13Q86UQ4 5058 aa2.77□□□□□ -1.97
VAPB-204ENST00000475243 RNF213Q63HN8 5207 aa2.76□□□□□ -1.97
VAPB-204ENST00000475243 KMT2DO14686 5537 aa2.69□□□□□ -1.98
VAPB-204ENST00000475243 DSTQ03001 7570 aaKnown RBP2.68□□□□□ -1.98
VAPB-204ENST00000475243 FCGBPQ9Y6R7 5405 aaPredicted RBP2.66□□□□□ -1.98
VAPB-204ENST00000475243 KRTAP9-9Q9BYP9 154 aa2.63□□□□□ -1.99
VAPB-204ENST00000475243 KRTAP4-11Q9BYQ6 195 aa2.54□□□□□ -2
VAPB-204ENST00000475243 KRTAP4-6Q9BYQ5 205 aa2.52□□□□□ -2.01
VAPB-204ENST00000475243 MACF1Q9UPN3 7388 aaKnown RBP2.46□□□□□ -2.02
VAPB-204ENST00000475243 USH2AO75445 5202 aa2.43□□□□□ -2.02
VAPB-204ENST00000475243 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
VAPB-204ENST00000475243 KRTAP20-2Q3LI61 65 aa2.4□□□□□ -2.03
VAPB-204ENST00000475243 KRTAP4-12Q9BQ66 201 aa2.37□□□□□ -2.03
VAPB-204ENST00000475243 KRTAP4-2Q9BYR5 136 aa2.37□□□□□ -2.03
VAPB-204ENST00000475243 KRTAP5-9P26371 169 aa2.36□□□□□ -2.03
VAPB-204ENST00000475243 SSPOA2VEC9 5147 aa2.3□□□□□ -2.04
VAPB-204ENST00000475243 NEBP20929 6669 aa2.29□□□□□ -2.04
VAPB-204ENST00000475243 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
VAPB-204ENST00000475243 MUC12Q9UKN1 5478 aa2.27□□□□□ -2.05
VAPB-204ENST00000475243 KRTAP5-4Q6L8H1 288 aa2.15□□□□□ -2.07
VAPB-204ENST00000475243 KRTAP5-5Q701N2 237 aaPredicted RBP2.14□□□□□ -2.07
VAPB-204ENST00000475243 MDN1Q9NU22 5596 aa2□□□□□ -2.09
VAPB-204ENST00000475243 GPR98Q8WXG9 6306 aa1.96□□□□□ -2.1
VAPB-204ENST00000475243 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
VAPB-204ENST00000475243 KRTAP5-3Q6L8H2 238 aa1.9□□□□□ -2.1
VAPB-204ENST00000475243 MUC5ACP98088 5654 aa1.88□□□□□ -2.11
VAPB-204ENST00000475243 KRTAP5-8O75690 187 aa1.79□□□□□ -2.12
VAPB-204ENST00000475243 KRTAP5-10Q6L8G5 202 aa1.7□□□□□ -2.14
VAPB-204ENST00000475243 HMCN1Q96RW7 5635 aa1.69□□□□□ -2.14
VAPB-204ENST00000475243 AHNAK2Q8IVF2 5795 aa1.61□□□□□ -2.15
VAPB-204ENST00000475243 KRTAP5-2Q701N4 177 aa1.61□□□□□ -2.15
VAPB-204ENST00000475243 KRTAP5-1Q6L8H4 278 aa1.54□□□□□ -2.16
VAPB-204ENST00000475243 MUC5BQ9HC84 5762 aaPredicted RBP1.51□□□□□ -2.17
VAPB-204ENST00000475243 KRTAP5-11Q6L8G4 156 aa1.46□□□□□ -2.18
VAPB-204ENST00000475243 KRTAP21-2Q3LI59 83 aa1.43□□□□□ -2.18
VAPB-204ENST00000475243 AHNAKQ09666 5890 aaKnown RBP1.34□□□□□ -2.19
VAPB-204ENST00000475243 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
VAPB-204ENST00000475243 KRTAP5-7Q6L8G8 165 aa1.22□□□□□ -2.21
VAPB-204ENST00000475243 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.21□□□□□ -2.22
VAPB-204ENST00000475243 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 76.4 ms