RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 MUC2Q02817 5179 aa3.37□□□□□ -1.87
RRP1B-202ENST00000470886 MT3P25713 68 aa3.37□□□□□ -1.87
RRP1B-202ENST00000470886 KRTAP2-3P0C7H8 128 aa3.37□□□□□ -1.87
RRP1B-202ENST00000470886 KRTAP2-4Q9BYR9 128 aa3.37□□□□□ -1.87
RRP1B-202ENST00000470886 KRTAP2-1Q9BYU5 128 aa3.37□□□□□ -1.87
RRP1B-202ENST00000470886 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
RRP1B-202ENST00000470886 KRTAP4-7Q9BYR0 210 aa3.35□□□□□ -1.87
RRP1B-202ENST00000470886 SPRR2EP22531 72 aa3.33□□□□□ -1.88
RRP1B-202ENST00000470886 SPRR2BP35325 72 aa3.33□□□□□ -1.88
RRP1B-202ENST00000470886 SPRR2AP35326 72 aa3.33□□□□□ -1.88
RRP1B-202ENST00000470886 UBR4Q5T4S7 5183 aa3.32□□□□□ -1.88
RRP1B-202ENST00000470886 MT1MQ8N339 61 aa3.31□□□□□ -1.88
RRP1B-202ENST00000470886 LCE2DQ5TA82 110 aaPredicted RBP3.3□□□□□ -1.88
RRP1B-202ENST00000470886 FSIP2Q5CZC0 6907 aa3.25□□□□□ -1.89
RRP1B-202ENST00000470886 SPRR2DP22532 72 aa3.23□□□□□ -1.89
RRP1B-202ENST00000470886 OBSCNQ5VST9 7968 aa3.23□□□□□ -1.89
RRP1B-202ENST00000470886 PRM1P04553 51 aa3.22□□□□□ -1.89
RRP1B-202ENST00000470886 KRTAP9-6A8MVA2 160 aa3.19□□□□□ -1.9
RRP1B-202ENST00000470886 KRTAP9-7A8MTY7 169 aa3.14□□□□□ -1.91
RRP1B-202ENST00000470886 LOC100996750A0A140TA64 210 aa3.13□□□□□ -1.91
RRP1B-202ENST00000470886 MT1AP04731 61 aa3.12□□□□□ -1.91
RRP1B-202ENST00000470886 KRTAP4-3Q9BYR4 195 aa3.1□□□□□ -1.91
RRP1B-202ENST00000470886 LCE5AQ5TCM9 118 aa3.06□□□□□ -1.92
RRP1B-202ENST00000470886 USH2AO75445 5202 aa3□□□□□ -1.93
RRP1B-202ENST00000470886 LCE1AQ5T7P2 110 aa2.98□□□□□ -1.93
RRP1B-202ENST00000470886 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.96□□□□□ -1.94
RRP1B-202ENST00000470886 KRTAP20-1Q3LI63 56 aa2.94□□□□□ -1.94
RRP1B-202ENST00000470886 SYNE2Q8WXH0 6885 aaKnown RBP2.94□□□□□ -1.94
RRP1B-202ENST00000470886 KMT2DO14686 5537 aa2.94□□□□□ -1.94
RRP1B-202ENST00000470886 KRTAP6-1Q3LI64 71 aa2.89□□□□□ -1.95
RRP1B-202ENST00000470886 KRTAP4-9Q9BYQ8 210 aa2.88□□□□□ -1.95
RRP1B-202ENST00000470886 KRTAP9-4Q9BYQ2 154 aa2.86□□□□□ -1.95
RRP1B-202ENST00000470886 SSPOA2VEC9 5147 aa2.84□□□□□ -1.96
RRP1B-202ENST00000470886 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
RRP1B-202ENST00000470886 KRTAP6-3Q3LI67 103 aa2.81□□□□□ -1.96
RRP1B-202ENST00000470886 KRTAP5-9P26371 169 aa2.81□□□□□ -1.96
RRP1B-202ENST00000470886 KRTAP6-2Q3LI66 62 aa2.79□□□□□ -1.96
RRP1B-202ENST00000470886 MACF1Q9UPN3 7388 aaKnown RBP2.78□□□□□ -1.96
RRP1B-202ENST00000470886 MT4P47944 62 aa2.76□□□□□ -1.97
RRP1B-202ENST00000470886 LCE1DQ5T752 114 aa2.71□□□□□ -1.98
RRP1B-202ENST00000470886 LCE1BQ5T7P3 118 aa2.71□□□□□ -1.98
RRP1B-202ENST00000470886 LCE1EQ5T753 118 aa2.68□□□□□ -1.98
RRP1B-202ENST00000470886 LCE4AQ5TA78 99 aa2.68□□□□□ -1.98
RRP1B-202ENST00000470886 GPR98Q8WXG9 6306 aa2.68□□□□□ -1.98
RRP1B-202ENST00000470886 DSTQ03001 7570 aaKnown RBP2.66□□□□□ -1.98
RRP1B-202ENST00000470886 KRTAP2-2Q9BYT5 123 aa2.66□□□□□ -1.98
RRP1B-202ENST00000470886 NEBP20929 6669 aa2.63□□□□□ -1.99
RRP1B-202ENST00000470886 KRTAP5-5Q701N2 237 aaPredicted RBP2.63□□□□□ -1.99
RRP1B-202ENST00000470886 FCGBPQ9Y6R7 5405 aaPredicted RBP2.62□□□□□ -1.99
RRP1B-202ENST00000470886 MUC12Q9UKN1 5478 aa2.51□□□□□ -2.01
RRP1B-202ENST00000470886 MDN1Q9NU22 5596 aa2.45□□□□□ -2.02
RRP1B-202ENST00000470886 LCE1FQ5T754 118 aa2.41□□□□□ -2.02
RRP1B-202ENST00000470886 KRTAP5-4Q6L8H1 288 aa2.38□□□□□ -2.03
RRP1B-202ENST00000470886 KRTAP20-2Q3LI61 65 aa2.35□□□□□ -2.03
RRP1B-202ENST00000470886 KRTAP4-11Q9BYQ6 195 aa2.34□□□□□ -2.03
RRP1B-202ENST00000470886 LCE1CQ5T751 118 aa2.26□□□□□ -2.05
RRP1B-202ENST00000470886 KRTAP4-6Q9BYQ5 205 aa2.26□□□□□ -2.05
RRP1B-202ENST00000470886 KRTAP5-2Q701N4 177 aa2.2□□□□□ -2.06
RRP1B-202ENST00000470886 KRTAP9-9Q9BYP9 154 aa2.15□□□□□ -2.07
RRP1B-202ENST00000470886 KRTAP5-3Q6L8H2 238 aa2.06□□□□□ -2.08
RRP1B-202ENST00000470886 AHNAK2Q8IVF2 5795 aa2□□□□□ -2.09
RRP1B-202ENST00000470886 KRTAP5-10Q6L8G5 202 aa1.96□□□□□ -2.1
RRP1B-202ENST00000470886 HMCN1Q96RW7 5635 aa1.92□□□□□ -2.1
RRP1B-202ENST00000470886 KRTAP4-12Q9BQ66 201 aa1.92□□□□□ -2.1
RRP1B-202ENST00000470886 KRTAP4-4Q9BYR3 166 aa1.88□□□□□ -2.11
RRP1B-202ENST00000470886 KRTAP5-1Q6L8H4 278 aa1.87□□□□□ -2.11
RRP1B-202ENST00000470886 KRTAP4-2Q9BYR5 136 aa1.87□□□□□ -2.11
RRP1B-202ENST00000470886 MUC5ACP98088 5654 aa1.86□□□□□ -2.11
RRP1B-202ENST00000470886 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.86□□□□□ -2.11
RRP1B-202ENST00000470886 KRTAP5-8O75690 187 aa1.85□□□□□ -2.11
RRP1B-202ENST00000470886 AHNAKQ09666 5890 aaKnown RBP1.79□□□□□ -2.12
RRP1B-202ENST00000470886 KRTAP5-11Q6L8G4 156 aa1.76□□□□□ -2.13
RRP1B-202ENST00000470886 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
RRP1B-202ENST00000470886 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
RRP1B-202ENST00000470886 KRTAP21-1Q3LI58 79 aa1.63□□□□□ -2.15
RRP1B-202ENST00000470886 MUC5BQ9HC84 5762 aaPredicted RBP1.6□□□□□ -2.15
RRP1B-202ENST00000470886 PHGR1C9JFL3 82 aa1.53□□□□□ -2.16
RRP1B-202ENST00000470886 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 12.9 ms