RNA–Protein interactions for RNA: ENST00000469381.1

GSE1-207, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 2

Gene GSE1, Length 5,885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-207ENST00000469381 MT1LQ93083 61 aa3.82□□□□□ -1.8
GSE1-207ENST00000469381 MT1EP04732 61 aa3.78□□□□□ -1.8
GSE1-207ENST00000469381 LCE3EQ5T5B0 92 aa3.78□□□□□ -1.8
GSE1-207ENST00000469381 KRTAP6-3Q3LI67 103 aa3.77□□□□□ -1.81
GSE1-207ENST00000469381 KRTAP9-7A8MTY7 169 aa3.71□□□□□ -1.82
GSE1-207ENST00000469381 KRTAP20-1Q3LI63 56 aa3.71□□□□□ -1.82
GSE1-207ENST00000469381 MT4P47944 62 aa3.69□□□□□ -1.82
GSE1-207ENST00000469381 HMCN2Q8NDA2 5059 aa3.69□□□□□ -1.82
GSE1-207ENST00000469381 MT1MQ8N339 61 aa3.67□□□□□ -1.82
GSE1-207ENST00000469381 RNF213Q63HN8 5207 aa3.65□□□□□ -1.83
GSE1-207ENST00000469381 LCE1AQ5T7P2 110 aa3.64□□□□□ -1.83
GSE1-207ENST00000469381 LOC100996750A0A140TA64 210 aa3.63□□□□□ -1.83
GSE1-207ENST00000469381 LCE1BQ5T7P3 118 aa3.63□□□□□ -1.83
GSE1-207ENST00000469381 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.62□□□□□ -1.83
GSE1-207ENST00000469381 FAT4Q6V0I7 4981 aa3.62□□□□□ -1.83
GSE1-207ENST00000469381 KRTAP2-3P0C7H8 128 aa3.6□□□□□ -1.83
GSE1-207ENST00000469381 KRTAP2-4Q9BYR9 128 aa3.6□□□□□ -1.83
GSE1-207ENST00000469381 KRTAP4-3Q9BYR4 195 aa3.59□□□□□ -1.84
GSE1-207ENST00000469381 LCE1DQ5T752 114 aa3.57□□□□□ -1.84
GSE1-207ENST00000469381 PRM1P04553 51 aa3.51□□□□□ -1.85
GSE1-207ENST00000469381 KRTAP19-7Q3SYF9 63 aa3.48□□□□□ -1.85
GSE1-207ENST00000469381 LCE5AQ5TCM9 118 aa3.48□□□□□ -1.85
GSE1-207ENST00000469381 LCE4AQ5TA78 99 aa3.45□□□□□ -1.86
GSE1-207ENST00000469381 KRTAP2-2Q9BYT5 123 aa3.44□□□□□ -1.86
GSE1-207ENST00000469381 KRTAP2-1Q9BYU5 128 aa3.44□□□□□ -1.86
GSE1-207ENST00000469381 UBR4Q5T4S7 5183 aa3.4□□□□□ -1.86
GSE1-207ENST00000469381 MT1AP04731 61 aa3.4□□□□□ -1.87
GSE1-207ENST00000469381 KRTAP4-9Q9BYQ8 210 aa3.36□□□□□ -1.87
GSE1-207ENST00000469381 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
GSE1-207ENST00000469381 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
GSE1-207ENST00000469381 LCE1FQ5T754 118 aa3.32□□□□□ -1.88
GSE1-207ENST00000469381 KRTAP5-9P26371 169 aa3.25□□□□□ -1.89
GSE1-207ENST00000469381 SYNE2Q8WXH0 6885 aaKnown RBP3.23□□□□□ -1.89
GSE1-207ENST00000469381 KRTAP9-6A8MVA2 160 aa3.22□□□□□ -1.89
GSE1-207ENST00000469381 KRTAP6-1Q3LI64 71 aa3.21□□□□□ -1.89
GSE1-207ENST00000469381 FSIP2Q5CZC0 6907 aa3.21□□□□□ -1.9
GSE1-207ENST00000469381 MUC2Q02817 5179 aa3.18□□□□□ -1.9
GSE1-207ENST00000469381 KRTAP6-2Q3LI66 62 aa3.16□□□□□ -1.9
GSE1-207ENST00000469381 KRTAP9-4Q9BYQ2 154 aa3.16□□□□□ -1.9
GSE1-207ENST00000469381 SYNE1Q8NF91 8797 aaKnown RBP3.13□□□□□ -1.91
GSE1-207ENST00000469381 SSPOA2VEC9 5147 aa3.1□□□□□ -1.91
GSE1-207ENST00000469381 NEBP20929 6669 aa3.09□□□□□ -1.91
GSE1-207ENST00000469381 USH2AO75445 5202 aa2.98□□□□□ -1.93
GSE1-207ENST00000469381 KRTAP9-9Q9BYP9 154 aa2.96□□□□□ -1.94
GSE1-207ENST00000469381 OBSCNQ5VST9 7968 aa2.92□□□□□ -1.94
GSE1-207ENST00000469381 KRTAP5-4Q6L8H1 288 aa2.81□□□□□ -1.96
GSE1-207ENST00000469381 KRTAP20-2Q3LI61 65 aa2.78□□□□□ -1.96
GSE1-207ENST00000469381 MACF1Q9UPN3 7388 aaKnown RBP2.77□□□□□ -1.97
GSE1-207ENST00000469381 FCGBPQ9Y6R7 5405 aaPredicted RBP2.76□□□□□ -1.97
GSE1-207ENST00000469381 KMT2DO14686 5537 aa2.73□□□□□ -1.97
GSE1-207ENST00000469381 KRTAP4-6Q9BYQ5 205 aa2.66□□□□□ -1.98
GSE1-207ENST00000469381 GPR98Q8WXG9 6306 aa2.66□□□□□ -1.98
GSE1-207ENST00000469381 KRTAP4-11Q9BYQ6 195 aa2.6□□□□□ -1.99
GSE1-207ENST00000469381 DSTQ03001 7570 aaKnown RBP2.59□□□□□ -1.99
GSE1-207ENST00000469381 KRTAP5-5Q701N2 237 aaPredicted RBP2.54□□□□□ -2
GSE1-207ENST00000469381 MUC12Q9UKN1 5478 aa2.47□□□□□ -2.01
GSE1-207ENST00000469381 MDN1Q9NU22 5596 aa2.44□□□□□ -2.02
GSE1-207ENST00000469381 KRTAP5-3Q6L8H2 238 aa2.43□□□□□ -2.02
GSE1-207ENST00000469381 KRTAP4-12Q9BQ66 201 aa2.42□□□□□ -2.02
GSE1-207ENST00000469381 KRTAP4-2Q9BYR5 136 aa2.42□□□□□ -2.02
GSE1-207ENST00000469381 MUC19Q7Z5P9 8384 aa2.41□□□□□ -2.02
GSE1-207ENST00000469381 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.02
GSE1-207ENST00000469381 KRTAP5-2Q701N4 177 aa2.23□□□□□ -2.05
GSE1-207ENST00000469381 HMCN1Q96RW7 5635 aa2.18□□□□□ -2.06
GSE1-207ENST00000469381 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
GSE1-207ENST00000469381 MUC5ACP98088 5654 aa2.17□□□□□ -2.06
GSE1-207ENST00000469381 KRTAP5-8O75690 187 aa2.13□□□□□ -2.07
GSE1-207ENST00000469381 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.08
GSE1-207ENST00000469381 KRTAP5-10Q6L8G5 202 aa1.99□□□□□ -2.09
GSE1-207ENST00000469381 PHGR1C9JFL3 82 aa1.96□□□□□ -2.1
GSE1-207ENST00000469381 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
GSE1-207ENST00000469381 KRTAP5-11Q6L8G4 156 aa1.91□□□□□ -2.1
GSE1-207ENST00000469381 KRTAP5-1Q6L8H4 278 aa1.88□□□□□ -2.11
GSE1-207ENST00000469381 MUC5BQ9HC84 5762 aaPredicted RBP1.88□□□□□ -2.11
GSE1-207ENST00000469381 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.78□□□□□ -2.12
GSE1-207ENST00000469381 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
GSE1-207ENST00000469381 KRTAP21-1Q3LI58 79 aa1.54□□□□□ -2.16
GSE1-207ENST00000469381 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms