RNA–Protein interactions for RNA: ENST00000468888.6

CLASP2-209, Transcript of cytoplasmic linker associated protein 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLASP2, Length 6,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP2-209ENST00000468888 KRTAP19-6Q3LI70 58 aa3.6□□□□□ -1.83
CLASP2-209ENST00000468888 HMCN2Q8NDA2 5059 aa3.59□□□□□ -1.83
CLASP2-209ENST00000468888 FSIP2Q5CZC0 6907 aa3.57□□□□□ -1.84
CLASP2-209ENST00000468888 KRTAP9-2Q9BYQ4 174 aa3.51□□□□□ -1.85
CLASP2-209ENST00000468888 MT1MQ8N339 61 aa3.5□□□□□ -1.85
CLASP2-209ENST00000468888 LCE2DQ5TA82 110 aaPredicted RBP3.48□□□□□ -1.85
CLASP2-209ENST00000468888 SYNE1Q8NF91 8797 aaKnown RBP3.44□□□□□ -1.86
CLASP2-209ENST00000468888 LOC100996750A0A140TA64 210 aa3.43□□□□□ -1.86
CLASP2-209ENST00000468888 KRTAP19-7Q3SYF9 63 aa3.42□□□□□ -1.86
CLASP2-209ENST00000468888 MUC2Q02817 5179 aa3.41□□□□□ -1.86
CLASP2-209ENST00000468888 MT3P25713 68 aa3.4□□□□□ -1.87
CLASP2-209ENST00000468888 PRM1P04553 51 aa3.39□□□□□ -1.87
CLASP2-209ENST00000468888 KRTAP4-3Q9BYR4 195 aa3.39□□□□□ -1.87
CLASP2-209ENST00000468888 KRTAP2-3P0C7H8 128 aa3.33□□□□□ -1.88
CLASP2-209ENST00000468888 KRTAP2-4Q9BYR9 128 aa3.33□□□□□ -1.88
CLASP2-209ENST00000468888 KRTAP2-1Q9BYU5 128 aa3.33□□□□□ -1.88
CLASP2-209ENST00000468888 KRTAP9-6A0A140TA67 174 aa3.28□□□□□ -1.88
CLASP2-209ENST00000468888 MT1AP04731 61 aa3.28□□□□□ -1.89
CLASP2-209ENST00000468888 MT4P47944 62 aa3.25□□□□□ -1.89
CLASP2-209ENST00000468888 KRTAP4-9Q9BYQ8 210 aa3.2□□□□□ -1.9
CLASP2-209ENST00000468888 SYNE2Q8WXH0 6885 aaKnown RBP3.18□□□□□ -1.9
CLASP2-209ENST00000468888 KRTAP9-6A8MVA2 160 aa3.17□□□□□ -1.9
CLASP2-209ENST00000468888 LCE1AQ5T7P2 110 aa3.16□□□□□ -1.9
CLASP2-209ENST00000468888 LCE1DQ5T752 114 aa3.16□□□□□ -1.9
CLASP2-209ENST00000468888 LCE1BQ5T7P3 118 aa3.16□□□□□ -1.9
CLASP2-209ENST00000468888 USH2AO75445 5202 aa3.15□□□□□ -1.9
CLASP2-209ENST00000468888 KRTAP6-3Q3LI67 103 aa3.14□□□□□ -1.91
CLASP2-209ENST00000468888 LCE5AQ5TCM9 118 aa3.12□□□□□ -1.91
CLASP2-209ENST00000468888 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
CLASP2-209ENST00000468888 KRTAP9-7A8MTY7 169 aa3.1□□□□□ -1.91
CLASP2-209ENST00000468888 KRTAP6-1Q3LI64 71 aa3.07□□□□□ -1.92
CLASP2-209ENST00000468888 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.07□□□□□ -1.92
CLASP2-209ENST00000468888 KRTAP20-1Q3LI63 56 aa3.03□□□□□ -1.93
CLASP2-209ENST00000468888 FCGBPQ9Y6R7 5405 aaPredicted RBP3.02□□□□□ -1.93
CLASP2-209ENST00000468888 KRTAP6-2Q3LI66 62 aa3.02□□□□□ -1.93
CLASP2-209ENST00000468888 KRTAP9-4Q9BYQ2 154 aa3□□□□□ -1.93
CLASP2-209ENST00000468888 DSTQ03001 7570 aaKnown RBP2.94□□□□□ -1.94
CLASP2-209ENST00000468888 KMT2DO14686 5537 aa2.93□□□□□ -1.94
CLASP2-209ENST00000468888 LCE4AQ5TA78 99 aa2.92□□□□□ -1.94
CLASP2-209ENST00000468888 KRTAP2-2Q9BYT5 123 aa2.9□□□□□ -1.94
CLASP2-209ENST00000468888 MACF1Q9UPN3 7388 aaKnown RBP2.88□□□□□ -1.95
CLASP2-209ENST00000468888 SSPOA2VEC9 5147 aa2.88□□□□□ -1.95
CLASP2-209ENST00000468888 KRTAP5-9P26371 169 aa2.8□□□□□ -1.96
CLASP2-209ENST00000468888 MUC12Q9UKN1 5478 aa2.79□□□□□ -1.96
CLASP2-209ENST00000468888 NEBP20929 6669 aa2.74□□□□□ -1.97
CLASP2-209ENST00000468888 MDN1Q9NU22 5596 aa2.66□□□□□ -1.98
CLASP2-209ENST00000468888 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
CLASP2-209ENST00000468888 LCE1EQ5T753 118 aa2.61□□□□□ -1.99
CLASP2-209ENST00000468888 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
CLASP2-209ENST00000468888 KRTAP4-6Q9BYQ5 205 aa2.58□□□□□ -2
CLASP2-209ENST00000468888 KRTAP20-2Q3LI61 65 aa2.54□□□□□ -2
CLASP2-209ENST00000468888 KRTAP4-11Q9BYQ6 195 aa2.48□□□□□ -2.01
CLASP2-209ENST00000468888 KRTAP9-9Q9BYP9 154 aa2.45□□□□□ -2.02
CLASP2-209ENST00000468888 MUC19Q7Z5P9 8384 aa2.45□□□□□ -2.02
CLASP2-209ENST00000468888 KRTAP5-5Q701N2 237 aaPredicted RBP2.39□□□□□ -2.03
CLASP2-209ENST00000468888 GPR98Q8WXG9 6306 aa2.38□□□□□ -2.03
CLASP2-209ENST00000468888 KRTAP5-4Q6L8H1 288 aa2.37□□□□□ -2.03
CLASP2-209ENST00000468888 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
CLASP2-209ENST00000468888 MUC5ACP98088 5654 aa2.18□□□□□ -2.06
CLASP2-209ENST00000468888 KRTAP4-12Q9BQ66 201 aa2.16□□□□□ -2.06
CLASP2-209ENST00000468888 KRTAP4-2Q9BYR5 136 aa2.16□□□□□ -2.06
CLASP2-209ENST00000468888 HMCN1Q96RW7 5635 aa2.11□□□□□ -2.07
CLASP2-209ENST00000468888 KRTAP5-3Q6L8H2 238 aa2.09□□□□□ -2.07
CLASP2-209ENST00000468888 AHNAK2Q8IVF2 5795 aa2.06□□□□□ -2.08
CLASP2-209ENST00000468888 KRTAP5-2Q701N4 177 aa1.98□□□□□ -2.09
CLASP2-209ENST00000468888 KRTAP5-8O75690 187 aa1.92□□□□□ -2.1
CLASP2-209ENST00000468888 KRTAP5-10Q6L8G5 202 aa1.89□□□□□ -2.11
CLASP2-209ENST00000468888 MUC5BQ9HC84 5762 aaPredicted RBP1.76□□□□□ -2.13
CLASP2-209ENST00000468888 KRTAP5-1Q6L8H4 278 aa1.73□□□□□ -2.13
CLASP2-209ENST00000468888 AHNAKQ09666 5890 aaKnown RBP1.73□□□□□ -2.13
CLASP2-209ENST00000468888 KRTAP5-11Q6L8G4 156 aa1.7□□□□□ -2.14
CLASP2-209ENST00000468888 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
CLASP2-209ENST00000468888 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
CLASP2-209ENST00000468888 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.57□□□□□ -2.16
CLASP2-209ENST00000468888 KRTAP21-1Q3LI58 79 aa1.52□□□□□ -2.17
CLASP2-209ENST00000468888 KRTAP5-7Q6L8G8 165 aa1.44□□□□□ -2.18
CLASP2-209ENST00000468888 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 13.7 ms