RNA–Protein interactions for RNA: ENST00000464989.5

SPEG-216, Transcript of SPEG complex locus, humanhuman

TSL 2

Gene SPEG, Length 5,132 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEG-216ENST00000464989 MT3P25713 68 aa5.76□□□□□ -1.49
SPEG-216ENST00000464989 LCE2AQ5TA79 106 aaPredicted RBP5.73□□□□□ -1.49
SPEG-216ENST00000464989 UBR4Q5T4S7 5183 aa5.72□□□□□ -1.49
SPEG-216ENST00000464989 MT1MQ8N339 61 aa5.71□□□□□ -1.49
SPEG-216ENST00000464989 RNF213Q63HN8 5207 aa5.71□□□□□ -1.49
SPEG-216ENST00000464989 KRTAP4-7Q9BYR0 210 aa5.71□□□□□ -1.5
SPEG-216ENST00000464989 FAT4Q6V0I7 4981 aa5.7□□□□□ -1.5
SPEG-216ENST00000464989 MT4P47944 62 aa5.68□□□□□ -1.5
SPEG-216ENST00000464989 KRTAP9-6A0A140TA67 174 aa5.67□□□□□ -1.5
SPEG-216ENST00000464989 SYNE1Q8NF91 8797 aaKnown RBP5.58□□□□□ -1.52
SPEG-216ENST00000464989 HMCN2Q8NDA2 5059 aa5.56□□□□□ -1.52
SPEG-216ENST00000464989 KRTAP19-7Q3SYF9 63 aa5.48□□□□□ -1.53
SPEG-216ENST00000464989 KRTAP20-1Q3LI63 56 aa5.44□□□□□ -1.54
SPEG-216ENST00000464989 LCE1BQ5T7P3 118 aa5.42□□□□□ -1.54
SPEG-216ENST00000464989 LCE1DQ5T752 114 aa5.41□□□□□ -1.54
SPEG-216ENST00000464989 KRTAP2-3P0C7H8 128 aa5.4□□□□□ -1.54
SPEG-216ENST00000464989 KRTAP2-4Q9BYR9 128 aa5.4□□□□□ -1.54
SPEG-216ENST00000464989 KRTAP2-1Q9BYU5 128 aa5.4□□□□□ -1.54
SPEG-216ENST00000464989 MT1AP04731 61 aa5.38□□□□□ -1.55
SPEG-216ENST00000464989 LOC100996750A0A140TA64 210 aa5.36□□□□□ -1.55
SPEG-216ENST00000464989 KRTAP9-7A8MTY7 169 aa5.35□□□□□ -1.55
SPEG-216ENST00000464989 PRM1P04553 51 aa5.34□□□□□ -1.55
SPEG-216ENST00000464989 MUC2Q02817 5179 aa5.34□□□□□ -1.55
SPEG-216ENST00000464989 LCE1AQ5T7P2 110 aa5.34□□□□□ -1.55
SPEG-216ENST00000464989 KRTAP4-3Q9BYR4 195 aa5.32□□□□□ -1.56
SPEG-216ENST00000464989 KRTAP6-3Q3LI67 103 aa5.32□□□□□ -1.56
SPEG-216ENST00000464989 LCE5AQ5TCM9 118 aa5.14□□□□□ -1.59
SPEG-216ENST00000464989 SYNE2Q8WXH0 6885 aaKnown RBP5.14□□□□□ -1.59
SPEG-216ENST00000464989 LCE4AQ5TA78 99 aa5.11□□□□□ -1.59
SPEG-216ENST00000464989 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.09□□□□□ -1.6
SPEG-216ENST00000464989 KRTAP9-6A8MVA2 160 aa5.07□□□□□ -1.6
SPEG-216ENST00000464989 KRTAP2-2Q9BYT5 123 aa5.06□□□□□ -1.6
SPEG-216ENST00000464989 OBSCNQ5VST9 7968 aa4.96□□□□□ -1.61
SPEG-216ENST00000464989 KRTAP4-9Q9BYQ8 210 aa4.96□□□□□ -1.62
SPEG-216ENST00000464989 KRTAP9-4Q9BYQ2 154 aa4.91□□□□□ -1.62
SPEG-216ENST00000464989 KRTAP6-1Q3LI64 71 aa4.9□□□□□ -1.62
SPEG-216ENST00000464989 KRTAP6-2Q3LI66 62 aa4.89□□□□□ -1.63
SPEG-216ENST00000464989 USH2AO75445 5202 aa4.79□□□□□ -1.64
SPEG-216ENST00000464989 FCGBPQ9Y6R7 5405 aaPredicted RBP4.77□□□□□ -1.65
SPEG-216ENST00000464989 DSTQ03001 7570 aaKnown RBP4.71□□□□□ -1.66
SPEG-216ENST00000464989 LCE1CQ5T751 118 aa4.7□□□□□ -1.66
SPEG-216ENST00000464989 LCE1EQ5T753 118 aa4.7□□□□□ -1.66
SPEG-216ENST00000464989 LCE1FQ5T754 118 aa4.7□□□□□ -1.66
SPEG-216ENST00000464989 MACF1Q9UPN3 7388 aaKnown RBP4.56□□□□□ -1.68
SPEG-216ENST00000464989 KMT2DO14686 5537 aa4.55□□□□□ -1.68
SPEG-216ENST00000464989 KRTAP9-9Q9BYP9 154 aa4.5□□□□□ -1.69
SPEG-216ENST00000464989 KRTAP5-9P26371 169 aa4.48□□□□□ -1.69
SPEG-216ENST00000464989 SSPOA2VEC9 5147 aa4.42□□□□□ -1.7
SPEG-216ENST00000464989 NEBP20929 6669 aa4.38□□□□□ -1.71
SPEG-216ENST00000464989 GPR98Q8WXG9 6306 aa4.34□□□□□ -1.71
SPEG-216ENST00000464989 MUC12Q9UKN1 5478 aa4.31□□□□□ -1.72
SPEG-216ENST00000464989 MDN1Q9NU22 5596 aa4.24□□□□□ -1.73
SPEG-216ENST00000464989 KRTAP20-2Q3LI61 65 aa4.13□□□□□ -1.75
SPEG-216ENST00000464989 KRTAP4-6Q9BYQ5 205 aa4.09□□□□□ -1.75
SPEG-216ENST00000464989 MUC19Q7Z5P9 8384 aa4.05□□□□□ -1.76
SPEG-216ENST00000464989 KRTAP5-4Q6L8H1 288 aa3.9□□□□□ -1.79
SPEG-216ENST00000464989 KRTAP4-11Q9BYQ6 195 aa3.87□□□□□ -1.79
SPEG-216ENST00000464989 KRTAP5-5Q701N2 237 aaPredicted RBP3.84□□□□□ -1.79
SPEG-216ENST00000464989 KRTAP4-12Q9BQ66 201 aa3.66□□□□□ -1.82
SPEG-216ENST00000464989 KRTAP4-2Q9BYR5 136 aa3.66□□□□□ -1.82
SPEG-216ENST00000464989 KRTAP4-4Q9BYR3 166 aa3.61□□□□□ -1.83
SPEG-216ENST00000464989 AHNAK2Q8IVF2 5795 aa3.52□□□□□ -1.85
SPEG-216ENST00000464989 KRTAP5-3Q6L8H2 238 aa3.45□□□□□ -1.86
SPEG-216ENST00000464989 MUC5ACP98088 5654 aa3.44□□□□□ -1.86
SPEG-216ENST00000464989 HMCN1Q96RW7 5635 aa3.33□□□□□ -1.88
SPEG-216ENST00000464989 KRTAP5-8O75690 187 aa3.1□□□□□ -1.91
SPEG-216ENST00000464989 KRTAP5-2Q701N4 177 aa3.1□□□□□ -1.91
SPEG-216ENST00000464989 KRTAP5-10Q6L8G5 202 aa3.06□□□□□ -1.92
SPEG-216ENST00000464989 PHGR1C9JFL3 82 aa2.92□□□□□ -1.94
SPEG-216ENST00000464989 MUC5BQ9HC84 5762 aaPredicted RBP2.84□□□□□ -1.96
SPEG-216ENST00000464989 AHNAKQ09666 5890 aaKnown RBP2.81□□□□□ -1.96
SPEG-216ENST00000464989 KRTAP5-11Q6L8G4 156 aa2.76□□□□□ -1.97
SPEG-216ENST00000464989 KRTAP5-1Q6L8H4 278 aa2.71□□□□□ -1.98
SPEG-216ENST00000464989 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -1.99
SPEG-216ENST00000464989 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
SPEG-216ENST00000464989 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
SPEG-216ENST00000464989 KRTAP5-7Q6L8G8 165 aa2.45□□□□□ -2.02
SPEG-216ENST00000464989 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 77.4 ms