RNA–Protein interactions for RNA: ENST00000461489.1

COL21A1-205, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 4

Gene COL21A1, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-205ENST00000461489 A0A087WVE0 104 aa0.89□□□□□ -2.27
COL21A1-205ENST00000461489 A0A1B0GV90 55 aa0.89□□□□□ -2.27
COL21A1-205ENST00000461489 MT2AP02795 61 aa0.89□□□□□ -2.27
COL21A1-205ENST00000461489 LINC01554Q52M75 96 aa0.89□□□□□ -2.27
COL21A1-205ENST00000461489 SPRR2GQ9BYE4 73 aa0.89□□□□□ -2.27
COL21A1-205ENST00000461489 CYSTM1Q9H1C7 97 aa0.89□□□□□ -2.27
COL21A1-205ENST00000461489 H7BZZ5 65 aa0.88□□□□□ -2.27
COL21A1-205ENST00000461489 UQCR11O14957 56 aa0.88□□□□□ -2.27
COL21A1-205ENST00000461489 TMEM258P61165 79 aa0.88□□□□□ -2.27
COL21A1-205ENST00000461489 MACF1Q9UPN3 7388 aaKnown RBP0.88□□□□□ -2.27
COL21A1-205ENST00000461489 TNP1P09430 55 aa0.87□□□□□ -2.27
COL21A1-205ENST00000461489 NEBP20929 6669 aa0.87□□□□□ -2.27
COL21A1-205ENST00000461489 USH2AO75445 5202 aa0.86□□□□□ -2.27
COL21A1-205ENST00000461489 A0A1B0GU33 70 aa0.86□□□□□ -2.27
COL21A1-205ENST00000461489 MT1FP04733 61 aa0.86□□□□□ -2.27
COL21A1-205ENST00000461489 COX7CP15954 63 aa0.86□□□□□ -2.27
COL21A1-205ENST00000461489 KRTAP19-2Q3LHN2 52 aa0.86□□□□□ -2.27
COL21A1-205ENST00000461489 KRTAP19-8Q3LI54 63 aa0.86□□□□□ -2.27
COL21A1-205ENST00000461489 KRTAP8-1Q8IUC2 63 aa0.86□□□□□ -2.27
COL21A1-205ENST00000461489 ANAPC13Q9BS18 74 aa0.86□□□□□ -2.27
COL21A1-205ENST00000461489 C10orf95Q9H7T3 257 aa0.86□□□□□ -2.27
COL21A1-205ENST00000461489 LOC105371267A0A1B0GV96 52 aa0.85□□□□□ -2.27
COL21A1-205ENST00000461489 KRTAP20-1Q3LI63 56 aa0.85□□□□□ -2.27
COL21A1-205ENST00000461489 SSPOA2VEC9 5147 aa0.85□□□□□ -2.27
COL21A1-205ENST00000461489 KRTAP2-3P0C7H8 128 aa0.84□□□□□ -2.27
COL21A1-205ENST00000461489 COA5Q86WW8 74 aa0.84□□□□□ -2.27
COL21A1-205ENST00000461489 KRTAP2-4Q9BYR9 128 aa0.84□□□□□ -2.27
COL21A1-205ENST00000461489 RPS28P62857 69 aaKnown RBP0.83□□□□□ -2.28
COL21A1-205ENST00000461489 SPRR2EP22531 72 aa0.82□□□□□ -2.28
COL21A1-205ENST00000461489 SPRR2BP35325 72 aa0.82□□□□□ -2.28
COL21A1-205ENST00000461489 SPRR2AP35326 72 aa0.82□□□□□ -2.28
COL21A1-205ENST00000461489 BRK1Q8WUW1 75 aa0.82□□□□□ -2.28
COL21A1-205ENST00000461489 SPRR2FQ96RM1 72 aa0.82□□□□□ -2.28
COL21A1-205ENST00000461489 CDC42SE1Q9NRR8 79 aa0.82□□□□□ -2.28
COL21A1-205ENST00000461489 SNURFQ9Y675 71 aa0.82□□□□□ -2.28
COL21A1-205ENST00000461489 SPRR2DP22532 72 aa0.81□□□□□ -2.28
COL21A1-205ENST00000461489 KRTAP25-1Q3LHN0 102 aa0.81□□□□□ -2.28
COL21A1-205ENST00000461489 KRTAP2-1Q9BYU5 128 aa0.81□□□□□ -2.28
COL21A1-205ENST00000461489 MIR22HGQ0VDD5 57 aa0.8□□□□□ -2.28
COL21A1-205ENST00000461489 MDN1Q9NU22 5596 aa0.8□□□□□ -2.28
COL21A1-205ENST00000461489 AHNAK2Q8IVF2 5795 aa0.79□□□□□ -2.28
COL21A1-205ENST00000461489 A0A0D9SG42 100 aa0.79□□□□□ -2.28
COL21A1-205ENST00000461489 A6NED7 52 aa0.79□□□□□ -2.28
COL21A1-205ENST00000461489 CCDC179H3BU77 68 aa0.79□□□□□ -2.28
COL21A1-205ENST00000461489 LINC01558Q9Y6Z2 57 aa0.79□□□□□ -2.28
COL21A1-205ENST00000461489 MUC12Q9UKN1 5478 aa0.79□□□□□ -2.28
COL21A1-205ENST00000461489 MT1BP07438 61 aa0.77□□□□□ -2.29
COL21A1-205ENST00000461489 MT1GP13640 62 aa0.77□□□□□ -2.29
COL21A1-205ENST00000461489 KMT2DO14686 5537 aa0.77□□□□□ -2.29
COL21A1-205ENST00000461489 Q1T7F1 81 aa0.75□□□□□ -2.29
COL21A1-205ENST00000461489 ROMO1P60602 79 aa0.74□□□□□ -2.29
COL21A1-205ENST00000461489 MT1XP80297 61 aa0.74□□□□□ -2.29
COL21A1-205ENST00000461489 SPATA8Q6RVD6 105 aa0.74□□□□□ -2.29
COL21A1-205ENST00000461489 KRTAP19-3Q7Z4W3 81 aa0.74□□□□□ -2.29
COL21A1-205ENST00000461489 AHNAKQ09666 5890 aaKnown RBP0.72□□□□□ -2.29
COL21A1-205ENST00000461489 DSTQ03001 7570 aaKnown RBP0.7□□□□□ -2.3
COL21A1-205ENST00000461489 PSPHP1O15172 72 aa0.7□□□□□ -2.3
COL21A1-205ENST00000461489 LUZP6Q538Z0 58 aa0.7□□□□□ -2.3
COL21A1-205ENST00000461489 MT1EP04732 61 aa0.69□□□□□ -2.3
COL21A1-205ENST00000461489 MT1MQ8N339 61 aa0.69□□□□□ -2.3
COL21A1-205ENST00000461489 KRTAP19-5Q3LI72 72 aa0.67□□□□□ -2.3
COL21A1-205ENST00000461489 MT1LQ93083 61 aa0.67□□□□□ -2.3
COL21A1-205ENST00000461489 PMAIP1Q13794 54 aa0.66□□□□□ -2.3
COL21A1-205ENST00000461489 MUC5BQ9HC84 5762 aaPredicted RBP0.64□□□□□ -2.31
COL21A1-205ENST00000461489 MT4P47944 62 aa0.64□□□□□ -2.31
COL21A1-205ENST00000461489 KRTAP19-7Q3SYF9 63 aa0.64□□□□□ -2.31
COL21A1-205ENST00000461489 PRO0628Q9UI54 55 aa0.61□□□□□ -2.31
COL21A1-205ENST00000461489 SYNE1Q8NF91 8797 aaKnown RBP0.61□□□□□ -2.31
COL21A1-205ENST00000461489 MT1AP04731 61 aa0.6□□□□□ -2.31
COL21A1-205ENST00000461489 KRTAP20-2Q3LI61 65 aa0.6□□□□□ -2.31
COL21A1-205ENST00000461489 KTN1-AS1Q86SY8 53 aa0.59□□□□□ -2.31
COL21A1-205ENST00000461489 MUC5ACP98088 5654 aa0.55□□□□□ -2.32
COL21A1-205ENST00000461489 KRTAP6-2Q3LI66 62 aa0.52□□□□□ -2.33
COL21A1-205ENST00000461489 KRTAP6-1Q3LI64 71 aa0.51□□□□□ -2.33
COL21A1-205ENST00000461489 INE1O15225 51 aa0.46□□□□□ -2.34
COL21A1-205ENST00000461489 PHGR1C9JFL3 82 aa0.4□□□□□ -2.35
COL21A1-205ENST00000461489 KRTAP21-1Q3LI58 79 aa0.37□□□□□ -2.35
COL21A1-205ENST00000461489 PRM1P04553 51 aa0.31□□□□□ -2.36
Retrieved 78 of 20,778 RNA–protein pairs in 68.7 ms