RNA–Protein interactions for RNA: ENST00000461489.1

COL21A1-205, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 4

Gene COL21A1, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-205ENST00000461489 AEBP2Q6ZN18 517 aaPredicted RBP26.93■■□□□ 1.9
COL21A1-205ENST00000461489 CHIC1Q5VXU3 224 aa25.77■■□□□ 1.72
COL21A1-205ENST00000461489 SENP3Q9H4L4 574 aaPredicted RBP22.98■■□□□ 1.27
COL21A1-205ENST00000461489 PHF23Q9BUL5 403 aaPredicted RBP22.7■■□□□ 1.22
COL21A1-205ENST00000461489 FOXD1Q16676 465 aa21.38■■□□□ 1.01
COL21A1-205ENST00000461489 PLPPR3Q6T4P5 718 aa20.7■□□□□ 0.9
COL21A1-205ENST00000461489 PPP6R1Q9UPN7 881 aa20.12■□□□□ 0.81
COL21A1-205ENST00000461489 ADRA2BP18089 450 aa20.1■□□□□ 0.81
COL21A1-205ENST00000461489 PIAS4Q8N2W9 510 aaPredicted RBP20.05■□□□□ 0.8
COL21A1-205ENST00000461489 MSH5O43196 834 aa19.96■□□□□ 0.79
COL21A1-205ENST00000461489 POTEDQ86YR6 584 aa19.15■□□□□ 0.66
COL21A1-205ENST00000461489 SCAF1Q9H7N4 1312 aaKnown RBP18.42■□□□□ 0.54
COL21A1-205ENST00000461489 MAPK8IP2Q13387 824 aaPredicted RBP18.39■□□□□ 0.53
COL21A1-205ENST00000461489 DMRT2Q9Y5R5 561 aa18.24■□□□□ 0.51
COL21A1-205ENST00000461489 PPP4R3CPQ6ZMV5 832 aa18.16■□□□□ 0.5
COL21A1-205ENST00000461489 CNKSR2Q8WXI2 1034 aa17.78■□□□□ 0.44
COL21A1-205ENST00000461489 HOXD11P31277 338 aaPredicted RBP17.62■□□□□ 0.41
COL21A1-205ENST00000461489 DCAF8L1A6NGE4 600 aa17.56■□□□□ 0.4
COL21A1-205ENST00000461489 NCBP3Q53F19 620 aaKnown RBP17.56■□□□□ 0.4
COL21A1-205ENST00000461489 RNF216Q9NWF9 866 aaPredicted RBP17.56■□□□□ 0.4
COL21A1-205ENST00000461489 NPM3O75607 178 aaKnown RBP17.26■□□□□ 0.35
COL21A1-205ENST00000461489 KCNA4P22459 653 aa17.1■□□□□ 0.33
COL21A1-205ENST00000461489 CACNB1Q02641 598 aaPredicted RBP17.04■□□□□ 0.32
COL21A1-205ENST00000461489 RNF39Q9H2S5 420 aa17.02■□□□□ 0.32
COL21A1-205ENST00000461489 DNAJC5BQ9UF47 199 aa16.96■□□□□ 0.31
COL21A1-205ENST00000461489 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.86■□□□□ 0.29
COL21A1-205ENST00000461489 C1QBPQ07021 282 aaKnown RBP16.8■□□□□ 0.28
COL21A1-205ENST00000461489 U3KPZ7 1027 aaPredicted RBP16.48■□□□□ 0.23
COL21A1-205ENST00000461489 SLC4A2P04920 1241 aa16.42■□□□□ 0.22
COL21A1-205ENST00000461489 SLC4A1APQ9BWU0 796 aaKnown RBP16.21■□□□□ 0.19
COL21A1-205ENST00000461489 CAPN15O75808 1086 aa16.2■□□□□ 0.18
COL21A1-205ENST00000461489 SPINK5Q9NQ38 1064 aaPredicted RBP16.2■□□□□ 0.18
COL21A1-205ENST00000461489 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.11■□□□□ 0.17
COL21A1-205ENST00000461489 HNRNPUL2Q1KMD3 747 aaKnown RBP16.11■□□□□ 0.17
COL21A1-205ENST00000461489 APLP2Q06481 763 aa16.1■□□□□ 0.17
COL21A1-205ENST00000461489 SAMD1Q6SPF0 538 aaPredicted RBP16.03■□□□□ 0.16
COL21A1-205ENST00000461489 DSG3P32926 999 aa16.01■□□□□ 0.15
COL21A1-205ENST00000461489 MYCNP04198 464 aaPredicted RBP15.98■□□□□ 0.15
COL21A1-205ENST00000461489 TRHP20396 242 aaPredicted RBP15.98■□□□□ 0.15
COL21A1-205ENST00000461489 ZNF219Q9P2Y4 722 aaPredicted RBP15.95■□□□□ 0.14
COL21A1-205ENST00000461489 FOXD4L1Q9NU39 408 aa15.91■□□□□ 0.14
COL21A1-205ENST00000461489 ABCB7O75027 752 aa15.83■□□□□ 0.12
COL21A1-205ENST00000461489 ZBTB22O15209 634 aa15.7■□□□□ 0.1
COL21A1-205ENST00000461489 POLA2Q14181 598 aa15.57■□□□□ 0.08
COL21A1-205ENST00000461489 ATF5Q9Y2D1 282 aaPredicted RBP15.56■□□□□ 0.08
COL21A1-205ENST00000461489 ATXN8OSP0DMR3 200 aa15.39■□□□□ 0.05
COL21A1-205ENST00000461489 RBM42Q9BTD8 480 aaKnown RBP15.31■□□□□ 0.04
COL21A1-205ENST00000461489 ZBTB12Q9Y330 459 aaPredicted RBP15.29■□□□□ 0.04
COL21A1-205ENST00000461489 CSRNP3Q8WYN3 585 aa15.16■□□□□ 0.02
COL21A1-205ENST00000461489 EHMT2Q96KQ7 1210 aa15.12■□□□□ 0.01
COL21A1-205ENST00000461489 OSCARQ8IYS5 282 aa15.07■□□□□ 0
COL21A1-205ENST00000461489 POTEHQ6S545 545 aa15.05■□□□□ -0
COL21A1-205ENST00000461489 FBLN2P98095 1184 aa15.01□□□□□ -0.01
COL21A1-205ENST00000461489 AKT1S1Q96B36 256 aa14.98□□□□□ -0.01
COL21A1-205ENST00000461489 CHRDL2Q6WN34 429 aa14.88□□□□□ -0.03
COL21A1-205ENST00000461489 MKRN4PQ13434 485 aaPredicted RBP14.86□□□□□ -0.03
COL21A1-205ENST00000461489 REM2Q8IYK8 340 aaPredicted RBP14.84□□□□□ -0.03
COL21A1-205ENST00000461489 SPDYE2BA6NHP3 402 aa14.82□□□□□ -0.04
COL21A1-205ENST00000461489 SPDYE6P0CI01 402 aa14.82□□□□□ -0.04
COL21A1-205ENST00000461489 SPDYE2Q495Y8 402 aa14.82□□□□□ -0.04
COL21A1-205ENST00000461489 ZNF692Q9BU19 519 aaPredicted RBP14.69□□□□□ -0.06
COL21A1-205ENST00000461489 PITPNM1O00562 1244 aa14.68□□□□□ -0.06
COL21A1-205ENST00000461489 SSUH2Q9Y2M2 353 aa14.61□□□□□ -0.07
COL21A1-205ENST00000461489 PIP4P2Q8N4L2 257 aa14.57□□□□□ -0.08
COL21A1-205ENST00000461489 SPDYE1Q8NFV5 336 aaPredicted RBP14.53□□□□□ -0.08
COL21A1-205ENST00000461489 CLEC11AQ9Y240 323 aa14.52□□□□□ -0.09
COL21A1-205ENST00000461489 FXR2P51116 673 aaKnown RBP eCLIP14.49□□□□□ -0.09
COL21A1-205ENST00000461489 PABPN1Q86U42 306 aaKnown RBP eCLIP14.47□□□□□ -0.09
COL21A1-205ENST00000461489 PRKAR2AP13861 404 aaKnown RBP14.32□□□□□ -0.12
COL21A1-205ENST00000461489 SPDYE4A6NLX3 237 aa14.3□□□□□ -0.12
COL21A1-205ENST00000461489 HAX1O00165 279 aa14.29□□□□□ -0.12
COL21A1-205ENST00000461489 PRR29P0C7W0 189 aa14.29□□□□□ -0.12
COL21A1-205ENST00000461489 SP7Q8TDD2 431 aaPredicted RBP14.2□□□□□ -0.14
COL21A1-205ENST00000461489 CHADLQ6NUI6 762 aa14.19□□□□□ -0.14
COL21A1-205ENST00000461489 STAG3Q9UJ98 1225 aa14.12□□□□□ -0.15
COL21A1-205ENST00000461489 EVX2Q03828 476 aa14.06□□□□□ -0.16
COL21A1-205ENST00000461489 C19orf67A6NJJ6 358 aa14.02□□□□□ -0.17
COL21A1-205ENST00000461489 FARP1Q9Y4F1 1045 aaPredicted RBP13.99□□□□□ -0.17
COL21A1-205ENST00000461489 CREBZFQ9NS37 354 aa13.94□□□□□ -0.18
COL21A1-205ENST00000461489 PROM2Q8N271 834 aa13.91□□□□□ -0.18
COL21A1-205ENST00000461489 CD44P16070 742 aaKnown RBP13.88□□□□□ -0.19
COL21A1-205ENST00000461489 GABBR2O75899 941 aa13.78□□□□□ -0.2
COL21A1-205ENST00000461489 FKBP8Q14318 412 aa13.78□□□□□ -0.2
COL21A1-205ENST00000461489 NPM1P06748 294 aaKnown RBP eCLIP13.74□□□□□ -0.21
COL21A1-205ENST00000461489 ZRANB1Q9UGI0 708 aa13.72□□□□□ -0.21
COL21A1-205ENST00000461489 MNX1P50219 401 aaPredicted RBP13.7□□□□□ -0.22
COL21A1-205ENST00000461489 PAK3O75914 559 aaPredicted RBP13.67□□□□□ -0.22
COL21A1-205ENST00000461489 ZNF579Q8NAF0 562 aaKnown RBP13.65□□□□□ -0.22
COL21A1-205ENST00000461489 PLEKHG5O94827 1062 aa13.64□□□□□ -0.23
COL21A1-205ENST00000461489 MIER1Q8N108 512 aa13.64□□□□□ -0.23
COL21A1-205ENST00000461489 CLCN6P51797 869 aa13.63□□□□□ -0.23
COL21A1-205ENST00000461489 PLCD3Q8N3E9 789 aa13.56□□□□□ -0.24
COL21A1-205ENST00000461489 PHF12Q96QT6 1004 aa13.53□□□□□ -0.24
COL21A1-205ENST00000461489 TSPYL2Q9H2G4 693 aaPredicted RBP13.5□□□□□ -0.25
COL21A1-205ENST00000461489 DCBLD2Q96PD2 775 aa13.49□□□□□ -0.25
COL21A1-205ENST00000461489 GALR2O43603 387 aaPredicted RBP13.47□□□□□ -0.25
COL21A1-205ENST00000461489 POTEIP0CG38 1075 aa13.46□□□□□ -0.25
COL21A1-205ENST00000461489 FBXO3Q9UK99 471 aa13.45□□□□□ -0.26
COL21A1-205ENST00000461489 ZBTB47Q9UFB7 747 aaPredicted RBP13.44□□□□□ -0.26
COL21A1-205ENST00000461489 RASEFQ8IZ41 740 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms