RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 LCE2AQ5TA79 106 aaPredicted RBP4.71□□□□□ -1.66
PTPRU-205ENST00000460170 MT1MQ8N339 61 aa4.69□□□□□ -1.66
PTPRU-205ENST00000460170 KRTAP19-7Q3SYF9 63 aa4.66□□□□□ -1.66
PTPRU-205ENST00000460170 LCE3EQ5T5B0 92 aa4.66□□□□□ -1.66
PTPRU-205ENST00000460170 MUC2Q02817 5179 aa4.65□□□□□ -1.67
PTPRU-205ENST00000460170 FSIP2Q5CZC0 6907 aa4.64□□□□□ -1.67
PTPRU-205ENST00000460170 SYNE1Q8NF91 8797 aaKnown RBP4.63□□□□□ -1.67
PTPRU-205ENST00000460170 LOC100996750A0A140TA64 210 aa4.59□□□□□ -1.68
PTPRU-205ENST00000460170 KRTAP4-3Q9BYR4 195 aa4.58□□□□□ -1.68
PTPRU-205ENST00000460170 LCE2DQ5TA82 110 aaPredicted RBP4.5□□□□□ -1.69
PTPRU-205ENST00000460170 KRTAP9-2Q9BYQ4 174 aa4.5□□□□□ -1.69
PTPRU-205ENST00000460170 KRTAP2-3P0C7H8 128 aa4.44□□□□□ -1.7
PTPRU-205ENST00000460170 KRTAP2-4Q9BYR9 128 aa4.44□□□□□ -1.7
PTPRU-205ENST00000460170 KRTAP2-1Q9BYU5 128 aa4.44□□□□□ -1.7
PTPRU-205ENST00000460170 KRTAP9-6A0A140TA67 174 aa4.4□□□□□ -1.7
PTPRU-205ENST00000460170 MT3P25713 68 aa4.4□□□□□ -1.7
PTPRU-205ENST00000460170 KRTAP9-6A8MVA2 160 aa4.37□□□□□ -1.71
PTPRU-205ENST00000460170 MT1AP04731 61 aa4.33□□□□□ -1.72
PTPRU-205ENST00000460170 PRM1P04553 51 aa4.33□□□□□ -1.72
PTPRU-205ENST00000460170 KRTAP4-9Q9BYQ8 210 aa4.24□□□□□ -1.73
PTPRU-205ENST00000460170 MT4P47944 62 aa4.23□□□□□ -1.73
PTPRU-205ENST00000460170 LCE5AQ5TCM9 118 aa4.18□□□□□ -1.74
PTPRU-205ENST00000460170 OBSCNQ5VST9 7968 aa4.18□□□□□ -1.74
PTPRU-205ENST00000460170 USH2AO75445 5202 aa4.16□□□□□ -1.74
PTPRU-205ENST00000460170 SYNE2Q8WXH0 6885 aaKnown RBP4.15□□□□□ -1.75
PTPRU-205ENST00000460170 LCE1AQ5T7P2 110 aa4.13□□□□□ -1.75
PTPRU-205ENST00000460170 FCGBPQ9Y6R7 5405 aaPredicted RBP4.12□□□□□ -1.75
PTPRU-205ENST00000460170 KRTAP6-1Q3LI64 71 aa4.12□□□□□ -1.75
PTPRU-205ENST00000460170 KRTAP20-1Q3LI63 56 aa4.07□□□□□ -1.76
PTPRU-205ENST00000460170 KRTAP9-7A8MTY7 169 aa4.06□□□□□ -1.76
PTPRU-205ENST00000460170 KRTAP6-3Q3LI67 103 aa4.05□□□□□ -1.76
PTPRU-205ENST00000460170 LCE1DQ5T752 114 aa4.05□□□□□ -1.76
PTPRU-205ENST00000460170 KMT2DO14686 5537 aa4.04□□□□□ -1.76
PTPRU-205ENST00000460170 LCE1BQ5T7P3 118 aa4.02□□□□□ -1.77
PTPRU-205ENST00000460170 DSTQ03001 7570 aaKnown RBP4.01□□□□□ -1.77
PTPRU-205ENST00000460170 KRTAP9-4Q9BYQ2 154 aa3.99□□□□□ -1.77
PTPRU-205ENST00000460170 KRTAP6-2Q3LI66 62 aa3.97□□□□□ -1.77
PTPRU-205ENST00000460170 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.92□□□□□ -1.78
PTPRU-205ENST00000460170 LCE4AQ5TA78 99 aa3.79□□□□□ -1.8
PTPRU-205ENST00000460170 MUC12Q9UKN1 5478 aa3.78□□□□□ -1.8
PTPRU-205ENST00000460170 SSPOA2VEC9 5147 aa3.77□□□□□ -1.81
PTPRU-205ENST00000460170 KRTAP2-2Q9BYT5 123 aa3.76□□□□□ -1.81
PTPRU-205ENST00000460170 MACF1Q9UPN3 7388 aaKnown RBP3.74□□□□□ -1.81
PTPRU-205ENST00000460170 KRTAP5-9P26371 169 aa3.66□□□□□ -1.82
PTPRU-205ENST00000460170 MDN1Q9NU22 5596 aa3.43□□□□□ -1.86
PTPRU-205ENST00000460170 NEBP20929 6669 aa3.4□□□□□ -1.87
PTPRU-205ENST00000460170 KRTAP4-6Q9BYQ5 205 aa3.39□□□□□ -1.87
PTPRU-205ENST00000460170 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
PTPRU-205ENST00000460170 KRTAP20-2Q3LI61 65 aa3.34□□□□□ -1.87
PTPRU-205ENST00000460170 LCE1CQ5T751 118 aa3.33□□□□□ -1.88
PTPRU-205ENST00000460170 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
PTPRU-205ENST00000460170 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
PTPRU-205ENST00000460170 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
PTPRU-205ENST00000460170 KRTAP9-9Q9BYP9 154 aa3.2□□□□□ -1.9
PTPRU-205ENST00000460170 KRTAP4-11Q9BYQ6 195 aa3.19□□□□□ -1.9
PTPRU-205ENST00000460170 KRTAP5-4Q6L8H1 288 aa3.09□□□□□ -1.91
PTPRU-205ENST00000460170 GPR98Q8WXG9 6306 aa3.07□□□□□ -1.92
PTPRU-205ENST00000460170 MUC5ACP98088 5654 aa2.89□□□□□ -1.95
PTPRU-205ENST00000460170 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
PTPRU-205ENST00000460170 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
PTPRU-205ENST00000460170 KRTAP4-2Q9BYR5 136 aa2.83□□□□□ -1.96
PTPRU-205ENST00000460170 HMCN1Q96RW7 5635 aa2.77□□□□□ -1.97
PTPRU-205ENST00000460170 KRTAP5-3Q6L8H2 238 aa2.7□□□□□ -1.98
PTPRU-205ENST00000460170 KRTAP5-2Q701N4 177 aa2.66□□□□□ -1.98
PTPRU-205ENST00000460170 AHNAK2Q8IVF2 5795 aa2.61□□□□□ -1.99
PTPRU-205ENST00000460170 KRTAP5-10Q6L8G5 202 aa2.59□□□□□ -2
PTPRU-205ENST00000460170 KRTAP5-8O75690 187 aa2.47□□□□□ -2.01
PTPRU-205ENST00000460170 KRTAP5-1Q6L8H4 278 aa2.31□□□□□ -2.04
PTPRU-205ENST00000460170 MUC5BQ9HC84 5762 aaPredicted RBP2.3□□□□□ -2.04
PTPRU-205ENST00000460170 KRTAP5-11Q6L8G4 156 aa2.28□□□□□ -2.04
PTPRU-205ENST00000460170 KRTAP21-2Q3LI59 83 aa2.25□□□□□ -2.05
PTPRU-205ENST00000460170 AHNAKQ09666 5890 aaKnown RBP2.18□□□□□ -2.06
PTPRU-205ENST00000460170 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.14□□□□□ -2.07
PTPRU-205ENST00000460170 PHGR1C9JFL3 82 aa2.08□□□□□ -2.08
PTPRU-205ENST00000460170 KRTAP5-7Q6L8G8 165 aa2.07□□□□□ -2.08
PTPRU-205ENST00000460170 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
PTPRU-205ENST00000460170 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 90.1 ms