RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 KRTAP2-3P0C7H8 128 aa2.67□□□□□ -1.98
SHROOM4-203ENST00000460112 LCE1BQ5T7P3 118 aa2.67□□□□□ -1.98
SHROOM4-203ENST00000460112 KRTAP2-4Q9BYR9 128 aa2.67□□□□□ -1.98
SHROOM4-203ENST00000460112 KRTAP2-1Q9BYU5 128 aa2.67□□□□□ -1.98
SHROOM4-203ENST00000460112 MT1AP04731 61 aa2.67□□□□□ -1.98
SHROOM4-203ENST00000460112 KRTAP19-6Q3LI70 58 aa2.66□□□□□ -1.98
SHROOM4-203ENST00000460112 EPPK1P58107 5090 aaKnown RBP2.65□□□□□ -1.98
SHROOM4-203ENST00000460112 UBR4Q5T4S7 5183 aa2.63□□□□□ -1.99
SHROOM4-203ENST00000460112 HMCN2Q8NDA2 5059 aa2.62□□□□□ -1.99
SHROOM4-203ENST00000460112 KRTAP20-1Q3LI63 56 aa2.58□□□□□ -2
SHROOM4-203ENST00000460112 LCE1AQ5T7P2 110 aa2.57□□□□□ -2
SHROOM4-203ENST00000460112 KRTAP4-7Q9BYR0 210 aa2.57□□□□□ -2
SHROOM4-203ENST00000460112 KRTAP9-2Q9BYQ4 174 aa2.56□□□□□ -2
SHROOM4-203ENST00000460112 LCE5AQ5TCM9 118 aa2.55□□□□□ -2
SHROOM4-203ENST00000460112 LCE2AQ5TA79 106 aaPredicted RBP2.51□□□□□ -2.01
SHROOM4-203ENST00000460112 LOC100996750A0A140TA64 210 aa2.49□□□□□ -2.01
SHROOM4-203ENST00000460112 LCE4AQ5TA78 99 aa2.49□□□□□ -2.01
SHROOM4-203ENST00000460112 KRTAP19-7Q3SYF9 63 aa2.49□□□□□ -2.01
SHROOM4-203ENST00000460112 KRTAP9-6A0A140TA67 174 aa2.49□□□□□ -2.01
SHROOM4-203ENST00000460112 FAT4Q6V0I7 4981 aa2.45□□□□□ -2.02
SHROOM4-203ENST00000460112 LPAP08519 4548 aa2.41□□□□□ -2.02
SHROOM4-203ENST00000460112 KRTAP6-3Q3LI67 103 aa2.41□□□□□ -2.02
SHROOM4-203ENST00000460112 SYNE1Q8NF91 8797 aaKnown RBP2.4□□□□□ -2.03
SHROOM4-203ENST00000460112 LCE1CQ5T751 118 aa2.4□□□□□ -2.03
SHROOM4-203ENST00000460112 LCE1EQ5T753 118 aa2.4□□□□□ -2.03
SHROOM4-203ENST00000460112 LCE1FQ5T754 118 aa2.4□□□□□ -2.03
SHROOM4-203ENST00000460112 KRTAP4-3Q9BYR4 195 aa2.39□□□□□ -2.03
SHROOM4-203ENST00000460112 KRTAP6-2Q3LI66 62 aa2.37□□□□□ -2.03
SHROOM4-203ENST00000460112 KRTAP9-4Q9BYQ2 154 aa2.37□□□□□ -2.03
SHROOM4-203ENST00000460112 USH2AO75445 5202 aa2.35□□□□□ -2.03
SHROOM4-203ENST00000460112 KRTAP9-7A8MTY7 169 aa2.34□□□□□ -2.03
SHROOM4-203ENST00000460112 KRTAP4-9Q9BYQ8 210 aa2.31□□□□□ -2.04
SHROOM4-203ENST00000460112 KRTAP2-2Q9BYT5 123 aa2.31□□□□□ -2.04
SHROOM4-203ENST00000460112 KRTAP6-1Q3LI64 71 aa2.28□□□□□ -2.04
SHROOM4-203ENST00000460112 KRTAP9-9Q9BYP9 154 aa2.25□□□□□ -2.05
SHROOM4-203ENST00000460112 MUC2Q02817 5179 aa2.22□□□□□ -2.05
SHROOM4-203ENST00000460112 SYNE2Q8WXH0 6885 aaKnown RBP2.22□□□□□ -2.05
SHROOM4-203ENST00000460112 KRTAP9-6A8MVA2 160 aa2.21□□□□□ -2.06
SHROOM4-203ENST00000460112 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.2□□□□□ -2.06
SHROOM4-203ENST00000460112 MDN1Q9NU22 5596 aa2.16□□□□□ -2.06
SHROOM4-203ENST00000460112 KRTAP5-9P26371 169 aa2.12□□□□□ -2.07
SHROOM4-203ENST00000460112 SSPOA2VEC9 5147 aa2.11□□□□□ -2.07
SHROOM4-203ENST00000460112 FCGBPQ9Y6R7 5405 aaPredicted RBP2.1□□□□□ -2.07
SHROOM4-203ENST00000460112 KMT2DO14686 5537 aa2.07□□□□□ -2.08
SHROOM4-203ENST00000460112 KRTAP4-11Q9BYQ6 195 aa1.95□□□□□ -2.1
SHROOM4-203ENST00000460112 FSIP2Q5CZC0 6907 aa1.91□□□□□ -2.1
SHROOM4-203ENST00000460112 NEBP20929 6669 aa1.88□□□□□ -2.11
SHROOM4-203ENST00000460112 OBSCNQ5VST9 7968 aa1.88□□□□□ -2.11
SHROOM4-203ENST00000460112 KRTAP20-2Q3LI61 65 aa1.88□□□□□ -2.11
SHROOM4-203ENST00000460112 KRTAP5-5Q701N2 237 aaPredicted RBP1.85□□□□□ -2.11
SHROOM4-203ENST00000460112 MUC12Q9UKN1 5478 aa1.84□□□□□ -2.11
SHROOM4-203ENST00000460112 KRTAP5-4Q6L8H1 288 aa1.83□□□□□ -2.12
SHROOM4-203ENST00000460112 KRTAP4-6Q9BYQ5 205 aa1.79□□□□□ -2.12
SHROOM4-203ENST00000460112 AHNAK2Q8IVF2 5795 aa1.78□□□□□ -2.12
SHROOM4-203ENST00000460112 GPR98Q8WXG9 6306 aa1.76□□□□□ -2.13
SHROOM4-203ENST00000460112 DSTQ03001 7570 aaKnown RBP1.75□□□□□ -2.13
SHROOM4-203ENST00000460112 HMCN1Q96RW7 5635 aa1.71□□□□□ -2.14
SHROOM4-203ENST00000460112 KRTAP4-4Q9BYR3 166 aa1.71□□□□□ -2.14
SHROOM4-203ENST00000460112 KRTAP4-12Q9BQ66 201 aa1.68□□□□□ -2.14
SHROOM4-203ENST00000460112 KRTAP4-2Q9BYR5 136 aa1.68□□□□□ -2.14
SHROOM4-203ENST00000460112 MACF1Q9UPN3 7388 aaKnown RBP1.65□□□□□ -2.15
SHROOM4-203ENST00000460112 AHNAKQ09666 5890 aaKnown RBP1.65□□□□□ -2.15
SHROOM4-203ENST00000460112 KRTAP5-2Q701N4 177 aa1.64□□□□□ -2.15
SHROOM4-203ENST00000460112 KRTAP5-3Q6L8H2 238 aa1.59□□□□□ -2.16
SHROOM4-203ENST00000460112 MUC5ACP98088 5654 aa1.59□□□□□ -2.16
SHROOM4-203ENST00000460112 MUC19Q7Z5P9 8384 aa1.56□□□□□ -2.16
SHROOM4-203ENST00000460112 MUC5BQ9HC84 5762 aaPredicted RBP1.5□□□□□ -2.17
SHROOM4-203ENST00000460112 KRTAP5-8O75690 187 aa1.5□□□□□ -2.17
SHROOM4-203ENST00000460112 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.49□□□□□ -2.17
SHROOM4-203ENST00000460112 KRTAP5-10Q6L8G5 202 aa1.47□□□□□ -2.17
SHROOM4-203ENST00000460112 KRTAP5-7Q6L8G8 165 aa1.42□□□□□ -2.18
SHROOM4-203ENST00000460112 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
SHROOM4-203ENST00000460112 KRTAP5-11Q6L8G4 156 aa1.4□□□□□ -2.19
SHROOM4-203ENST00000460112 KRTAP5-1Q6L8H4 278 aa1.38□□□□□ -2.19
SHROOM4-203ENST00000460112 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
SHROOM4-203ENST00000460112 KRTAP21-2Q3LI59 83 aa1.22□□□□□ -2.21
SHROOM4-203ENST00000460112 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 71.4 ms