RNA–Protein interactions for RNA: ENST00000459741.5

TRAPPC10-204, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 5,826 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-204ENST00000459741 BIRC6Q9NR09 4857 aa3.53□□□□□ -1.84
TRAPPC10-204ENST00000459741 MT1MQ8N339 61 aa3.52□□□□□ -1.85
TRAPPC10-204ENST00000459741 KRTAP9-6A0A140TA67 174 aa3.52□□□□□ -1.85
TRAPPC10-204ENST00000459741 MT3P25713 68 aa3.52□□□□□ -1.85
TRAPPC10-204ENST00000459741 LCE1BQ5T7P3 118 aa3.49□□□□□ -1.85
TRAPPC10-204ENST00000459741 PRM1P04553 51 aa3.47□□□□□ -1.85
TRAPPC10-204ENST00000459741 KRTAP19-7Q3SYF9 63 aa3.45□□□□□ -1.86
TRAPPC10-204ENST00000459741 LCE1DQ5T752 114 aa3.45□□□□□ -1.86
TRAPPC10-204ENST00000459741 KRTAP19-6Q3LI70 58 aa3.41□□□□□ -1.86
TRAPPC10-204ENST00000459741 LOC100996750A0A140TA64 210 aa3.4□□□□□ -1.86
TRAPPC10-204ENST00000459741 ABCA13Q86UQ4 5058 aa3.38□□□□□ -1.87
TRAPPC10-204ENST00000459741 KRTAP20-1Q3LI63 56 aa3.36□□□□□ -1.87
TRAPPC10-204ENST00000459741 KRTAP4-3Q9BYR4 195 aa3.35□□□□□ -1.87
TRAPPC10-204ENST00000459741 MT1AP04731 61 aa3.33□□□□□ -1.88
TRAPPC10-204ENST00000459741 LCE5AQ5TCM9 118 aa3.3□□□□□ -1.88
TRAPPC10-204ENST00000459741 HMCN2Q8NDA2 5059 aa3.29□□□□□ -1.88
TRAPPC10-204ENST00000459741 KRTAP9-6A8MVA2 160 aa3.29□□□□□ -1.88
TRAPPC10-204ENST00000459741 RNF213Q63HN8 5207 aa3.27□□□□□ -1.89
TRAPPC10-204ENST00000459741 EPPK1P58107 5090 aaKnown RBP3.27□□□□□ -1.89
TRAPPC10-204ENST00000459741 KRTAP9-7A8MTY7 169 aa3.25□□□□□ -1.89
TRAPPC10-204ENST00000459741 FAT4Q6V0I7 4981 aa3.24□□□□□ -1.89
TRAPPC10-204ENST00000459741 SYNE1Q8NF91 8797 aaKnown RBP3.24□□□□□ -1.89
TRAPPC10-204ENST00000459741 UBR4Q5T4S7 5183 aa3.21□□□□□ -1.9
TRAPPC10-204ENST00000459741 LCE2AQ5TA79 106 aaPredicted RBP3.21□□□□□ -1.9
TRAPPC10-204ENST00000459741 KRTAP4-9Q9BYQ8 210 aa3.19□□□□□ -1.9
TRAPPC10-204ENST00000459741 KRTAP6-1Q3LI64 71 aa3.09□□□□□ -1.92
TRAPPC10-204ENST00000459741 KRTAP6-2Q3LI66 62 aa3.09□□□□□ -1.92
TRAPPC10-204ENST00000459741 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
TRAPPC10-204ENST00000459741 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
TRAPPC10-204ENST00000459741 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
TRAPPC10-204ENST00000459741 LCE1AQ5T7P2 110 aa3.08□□□□□ -1.92
TRAPPC10-204ENST00000459741 KRTAP6-3Q3LI67 103 aa3.07□□□□□ -1.92
TRAPPC10-204ENST00000459741 KRTAP9-4Q9BYQ2 154 aa3.04□□□□□ -1.92
TRAPPC10-204ENST00000459741 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.02□□□□□ -1.93
TRAPPC10-204ENST00000459741 LCE4AQ5TA78 99 aa3.01□□□□□ -1.93
TRAPPC10-204ENST00000459741 SYNE2Q8WXH0 6885 aaKnown RBP3□□□□□ -1.93
TRAPPC10-204ENST00000459741 KRTAP2-2Q9BYT5 123 aa2.97□□□□□ -1.93
TRAPPC10-204ENST00000459741 OBSCNQ5VST9 7968 aa2.95□□□□□ -1.94
TRAPPC10-204ENST00000459741 MUC2Q02817 5179 aa2.92□□□□□ -1.94
TRAPPC10-204ENST00000459741 FSIP2Q5CZC0 6907 aa2.87□□□□□ -1.95
TRAPPC10-204ENST00000459741 KRTAP9-9Q9BYP9 154 aa2.78□□□□□ -1.96
TRAPPC10-204ENST00000459741 USH2AO75445 5202 aa2.74□□□□□ -1.97
TRAPPC10-204ENST00000459741 FCGBPQ9Y6R7 5405 aaPredicted RBP2.71□□□□□ -1.98
TRAPPC10-204ENST00000459741 KMT2DO14686 5537 aa2.6□□□□□ -1.99
TRAPPC10-204ENST00000459741 KRTAP5-9P26371 169 aa2.55□□□□□ -2
TRAPPC10-204ENST00000459741 KRTAP5-5Q701N2 237 aaPredicted RBP2.54□□□□□ -2
TRAPPC10-204ENST00000459741 SSPOA2VEC9 5147 aa2.52□□□□□ -2.01
TRAPPC10-204ENST00000459741 DSTQ03001 7570 aaKnown RBP2.52□□□□□ -2.01
TRAPPC10-204ENST00000459741 KRTAP4-11Q9BYQ6 195 aa2.51□□□□□ -2.01
TRAPPC10-204ENST00000459741 NEBP20929 6669 aa2.5□□□□□ -2.01
TRAPPC10-204ENST00000459741 KRTAP20-2Q3LI61 65 aa2.46□□□□□ -2.01
TRAPPC10-204ENST00000459741 KRTAP4-6Q9BYQ5 205 aa2.45□□□□□ -2.02
TRAPPC10-204ENST00000459741 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
TRAPPC10-204ENST00000459741 MUC12Q9UKN1 5478 aa2.41□□□□□ -2.02
TRAPPC10-204ENST00000459741 MACF1Q9UPN3 7388 aaKnown RBP2.4□□□□□ -2.03
TRAPPC10-204ENST00000459741 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
TRAPPC10-204ENST00000459741 KRTAP4-12Q9BQ66 201 aa2.36□□□□□ -2.03
TRAPPC10-204ENST00000459741 KRTAP4-2Q9BYR5 136 aa2.36□□□□□ -2.03
TRAPPC10-204ENST00000459741 MDN1Q9NU22 5596 aa2.26□□□□□ -2.05
TRAPPC10-204ENST00000459741 KRTAP5-4Q6L8H1 288 aa2.24□□□□□ -2.05
TRAPPC10-204ENST00000459741 GPR98Q8WXG9 6306 aa2.23□□□□□ -2.05
TRAPPC10-204ENST00000459741 KRTAP5-10Q6L8G5 202 aa1.98□□□□□ -2.09
TRAPPC10-204ENST00000459741 KRTAP5-3Q6L8H2 238 aa1.97□□□□□ -2.09
TRAPPC10-204ENST00000459741 MUC5ACP98088 5654 aa1.93□□□□□ -2.1
TRAPPC10-204ENST00000459741 KRTAP5-2Q701N4 177 aa1.89□□□□□ -2.11
TRAPPC10-204ENST00000459741 HMCN1Q96RW7 5635 aa1.85□□□□□ -2.11
TRAPPC10-204ENST00000459741 PHGR1C9JFL3 82 aa1.84□□□□□ -2.12
TRAPPC10-204ENST00000459741 KRTAP5-8O75690 187 aa1.8□□□□□ -2.12
TRAPPC10-204ENST00000459741 AHNAK2Q8IVF2 5795 aa1.78□□□□□ -2.12
TRAPPC10-204ENST00000459741 MUC5BQ9HC84 5762 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC10-204ENST00000459741 KRTAP5-11Q6L8G4 156 aa1.68□□□□□ -2.14
TRAPPC10-204ENST00000459741 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
TRAPPC10-204ENST00000459741 KRTAP5-1Q6L8H4 278 aa1.67□□□□□ -2.14
TRAPPC10-204ENST00000459741 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.15
TRAPPC10-204ENST00000459741 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.6□□□□□ -2.15
TRAPPC10-204ENST00000459741 KRTAP5-7Q6L8G8 165 aa1.52□□□□□ -2.17
TRAPPC10-204ENST00000459741 AHNAKQ09666 5890 aaKnown RBP1.48□□□□□ -2.17
TRAPPC10-204ENST00000459741 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 152.6 ms