RNA–Protein interactions for RNA: ENST00000459741.5

TRAPPC10-204, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 5,826 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-204ENST00000459741 DCAF8L2P0C7V8 631 aa19.27■□□□□ 0.68
TRAPPC10-204ENST00000459741 NISCHQ9Y2I1 1504 aa18.92■□□□□ 0.62
TRAPPC10-204ENST00000459741 SUPT5HO00267 1087 aaKnown RBP18.53■□□□□ 0.56
TRAPPC10-204ENST00000459741 PELP1Q8IZL8 1130 aaKnown RBP18.13■□□□□ 0.49
TRAPPC10-204ENST00000459741 SHROOM4Q9ULL8 1493 aa18.1■□□□□ 0.49
TRAPPC10-204ENST00000459741 PCGF6Q9BYE7 350 aa17.83■□□□□ 0.44
TRAPPC10-204ENST00000459741 ZEB1P37275 1124 aaPredicted RBP17.81■□□□□ 0.44
TRAPPC10-204ENST00000459741 MYT1Q01538 1121 aa17.75■□□□□ 0.43
TRAPPC10-204ENST00000459741 EHMT2Q96KQ7 1210 aa17.73■□□□□ 0.43
TRAPPC10-204ENST00000459741 CENPBP07199 599 aaPredicted RBP17.69■□□□□ 0.42
TRAPPC10-204ENST00000459741 APLP2Q06481 763 aa17.52■□□□□ 0.4
TRAPPC10-204ENST00000459741 FAM9AQ8IZU1 332 aaPredicted RBP17.49■□□□□ 0.39
TRAPPC10-204ENST00000459741 HRCP23327 699 aa17.41■□□□□ 0.38
TRAPPC10-204ENST00000459741 CCER1Q8TC90 406 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC10-204ENST00000459741 TRIM41Q8WV44 630 aa17.25■□□□□ 0.35
TRAPPC10-204ENST00000459741 TRIM26Q12899 539 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC10-204ENST00000459741 ERICH6Q7L0X2 663 aa17.23■□□□□ 0.35
TRAPPC10-204ENST00000459741 TTBK1Q5TCY1 1321 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC10-204ENST00000459741 NEFLP07196 543 aa17.02■□□□□ 0.32
TRAPPC10-204ENST00000459741 RANGAP1P46060 587 aaPredicted RBP17■□□□□ 0.31
TRAPPC10-204ENST00000459741 ATP1B4Q9UN42 357 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC10-204ENST00000459741 YTHDC1Q96MU7 727 aaKnown RBP16.96■□□□□ 0.31
TRAPPC10-204ENST00000459741 CHIC1Q5VXU3 224 aa16.93■□□□□ 0.3
TRAPPC10-204ENST00000459741 UBTFP17480 764 aaKnown RBP16.88■□□□□ 0.29
TRAPPC10-204ENST00000459741 PPARGC1BQ86YN6 1023 aaKnown RBP16.79■□□□□ 0.28
TRAPPC10-204ENST00000459741 LOC105371045A0A1W2PR82 267 aa16.72■□□□□ 0.27
TRAPPC10-204ENST00000459741 DIEXFQ68CQ4 756 aaKnown RBP16.63■□□□□ 0.25
TRAPPC10-204ENST00000459741 MYT1LQ9UL68 1186 aa16.56■□□□□ 0.24
TRAPPC10-204ENST00000459741 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.46■□□□□ 0.23
TRAPPC10-204ENST00000459741 GTF3C3Q9Y5Q9 886 aa16.45■□□□□ 0.22
TRAPPC10-204ENST00000459741 HNRNPUL2Q1KMD3 747 aaKnown RBP16.42■□□□□ 0.22
TRAPPC10-204ENST00000459741 DAXXQ9UER7 740 aaPredicted RBP16.37■□□□□ 0.21
TRAPPC10-204ENST00000459741 ACIN1Q9UKV3 1341 aaKnown RBP16.37■□□□□ 0.21
TRAPPC10-204ENST00000459741 POLR3GLQ9BT43 218 aa16.32■□□□□ 0.2
TRAPPC10-204ENST00000459741 RTL5Q5HYW3 569 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC10-204ENST00000459741 ZNF316A6NFI3 1004 aaPredicted RBP16.26■□□□□ 0.19
TRAPPC10-204ENST00000459741 ITGAEP38570 1179 aa16.26■□□□□ 0.19
TRAPPC10-204ENST00000459741 DCAF1Q9Y4B6 1507 aa16.25■□□□□ 0.19
TRAPPC10-204ENST00000459741 CLSPNQ9HAW4 1339 aa16.22■□□□□ 0.19
TRAPPC10-204ENST00000459741 SLC4A1APQ9BWU0 796 aaKnown RBP16.17■□□□□ 0.18
TRAPPC10-204ENST00000459741 CNGB1Q14028 1251 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC10-204ENST00000459741 CDK11AQ9UQ88 783 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC10-204ENST00000459741 ANP32CO43423 234 aa16.05■□□□□ 0.16
TRAPPC10-204ENST00000459741 BCANQ96GW7 911 aa16.04■□□□□ 0.16
TRAPPC10-204ENST00000459741 SCAF1Q9H7N4 1312 aaKnown RBP15.94■□□□□ 0.14
TRAPPC10-204ENST00000459741 FAM50AQ14320 339 aaKnown RBP15.93■□□□□ 0.14
TRAPPC10-204ENST00000459741 NEUROD1Q13562 356 aa15.91■□□□□ 0.14
TRAPPC10-204ENST00000459741 CSRNP3Q8WYN3 585 aa15.84■□□□□ 0.13
TRAPPC10-204ENST00000459741 ANP32AP39687 249 aaKnown RBP15.81■□□□□ 0.12
TRAPPC10-204ENST00000459741 TRIM52Q96A61 297 aa15.79■□□□□ 0.12
TRAPPC10-204ENST00000459741 ZCCHC6Q5VYS8 1495 aaKnown RBP15.79■□□□□ 0.12
TRAPPC10-204ENST00000459741 FKBP8Q14318 412 aa15.76■□□□□ 0.11
TRAPPC10-204ENST00000459741 CCDC180Q9P1Z9 1646 aa15.73■□□□□ 0.11
TRAPPC10-204ENST00000459741 SLC24A1O60721 1099 aa15.7■□□□□ 0.1
TRAPPC10-204ENST00000459741 ZBTB47Q9UFB7 747 aaPredicted RBP15.7■□□□□ 0.1
TRAPPC10-204ENST00000459741 MYO15BQ96JP2 1530 aa15.66■□□□□ 0.1
TRAPPC10-204ENST00000459741 MIER1Q8N108 512 aa15.62■□□□□ 0.09
TRAPPC10-204ENST00000459741 FBLN2P98095 1184 aa15.6■□□□□ 0.09
TRAPPC10-204ENST00000459741 ZNF326Q5BKZ1 582 aaKnown RBP15.6■□□□□ 0.09
TRAPPC10-204ENST00000459741 TONSLQ96HA7 1378 aa15.57■□□□□ 0.08
TRAPPC10-204ENST00000459741 HNRNPUQ00839 825 aaKnown RBP eCLIP15.56■□□□□ 0.08
TRAPPC10-204ENST00000459741 BCL11AQ9H165 835 aa15.56■□□□□ 0.08
TRAPPC10-204ENST00000459741 ANP32EQ9BTT0 268 aa15.54■□□□□ 0.08
TRAPPC10-204ENST00000459741 DDX10Q13206 875 aaKnown RBP15.54■□□□□ 0.08
TRAPPC10-204ENST00000459741 NEFMP07197 916 aa15.52■□□□□ 0.08
TRAPPC10-204ENST00000459741 NPM2Q86SE8 214 aaKnown RBP15.51■□□□□ 0.07
TRAPPC10-204ENST00000459741 ABCC9O60706 1549 aa15.51■□□□□ 0.07
TRAPPC10-204ENST00000459741 CANXP27824 592 aaKnown RBP15.5■□□□□ 0.07
TRAPPC10-204ENST00000459741 GLIPR1L2Q4G1C9 344 aa15.48■□□□□ 0.07
TRAPPC10-204ENST00000459741 PABPN1Q86U42 306 aaKnown RBP eCLIP15.46■□□□□ 0.07
TRAPPC10-204ENST00000459741 EIF5BO60841 1220 aaKnown RBP15.46■□□□□ 0.07
TRAPPC10-204ENST00000459741 EEA1Q15075 1411 aa15.44■□□□□ 0.06
TRAPPC10-204ENST00000459741 CCDC136Q96JN2 1154 aa15.43■□□□□ 0.06
TRAPPC10-204ENST00000459741 ESF1Q9H501 851 aaKnown RBP15.41■□□□□ 0.06
TRAPPC10-204ENST00000459741 FAM9BQ8IZU0 186 aa15.39■□□□□ 0.05
TRAPPC10-204ENST00000459741 SCRIBQ14160 1630 aa15.39■□□□□ 0.05
TRAPPC10-204ENST00000459741 CLIP1P30622 1438 aa15.38■□□□□ 0.05
TRAPPC10-204ENST00000459741 NBR1Q14596 966 aa15.38■□□□□ 0.05
TRAPPC10-204ENST00000459741 ANP32BQ92688 251 aaKnown RBP15.38■□□□□ 0.05
TRAPPC10-204ENST00000459741 UPF2Q9HAU5 1272 aaKnown RBP15.37■□□□□ 0.05
TRAPPC10-204ENST00000459741 CEP162Q5TB80 1403 aa15.36■□□□□ 0.05
TRAPPC10-204ENST00000459741 P3H3Q8IVL6 736 aa15.35■□□□□ 0.05
TRAPPC10-204ENST00000459741 ARID3CA6NKF2 412 aa15.34■□□□□ 0.05
TRAPPC10-204ENST00000459741 PLPPR3Q6T4P5 718 aa15.34■□□□□ 0.05
TRAPPC10-204ENST00000459741 GOLGA3Q08378 1498 aa15.33■□□□□ 0.05
TRAPPC10-204ENST00000459741 MRS2Q9HD23 443 aa15.32■□□□□ 0.04
TRAPPC10-204ENST00000459741 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.3■□□□□ 0.04
TRAPPC10-204ENST00000459741 TNIKQ9UKE5 1360 aa15.3■□□□□ 0.04
TRAPPC10-204ENST00000459741 TMC1Q8TDI8 760 aa15.29■□□□□ 0.04
TRAPPC10-204ENST00000459741 SUPT16HQ9Y5B9 1047 aaKnown RBP15.29■□□□□ 0.04
TRAPPC10-204ENST00000459741 ZNF777Q9ULD5 760 aaPredicted RBP15.29■□□□□ 0.04
TRAPPC10-204ENST00000459741 STAG3Q9UJ98 1225 aa15.28■□□□□ 0.04
TRAPPC10-204ENST00000459741 RSF1Q96T23 1441 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC10-204ENST00000459741 DDRGK1Q96HY6 314 aa15.28■□□□□ 0.04
TRAPPC10-204ENST00000459741 EIF4G2P78344 907 aaKnown RBP eCLIP15.23■□□□□ 0.03
TRAPPC10-204ENST00000459741 IRX6P78412 446 aaPredicted RBP15.23■□□□□ 0.03
TRAPPC10-204ENST00000459741 CHGAP10645 457 aaKnown RBP15.22■□□□□ 0.03
TRAPPC10-204ENST00000459741 HSP90AA1P07900 732 aaKnown RBP15.22■□□□□ 0.03
TRAPPC10-204ENST00000459741 PPP4R2Q9NY27 417 aa15.19■□□□□ 0.02
TRAPPC10-204ENST00000459741 PPM1GO15355 546 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms