RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 KRTAP19-2Q3LHN2 52 aa5.88□□□□□ -1.47
SNX27-204ENST00000458013 KMT2CQ8NEZ4 4911 aaKnown RBP5.86□□□□□ -1.47
SNX27-204ENST00000458013 KRTAP9-2Q9BYQ4 174 aa5.81□□□□□ -1.48
SNX27-204ENST00000458013 LCE5AQ5TCM9 118 aa5.71□□□□□ -1.5
SNX27-204ENST00000458013 KRTAP19-6Q3LI70 58 aa5.68□□□□□ -1.5
SNX27-204ENST00000458013 SYNE2Q8WXH0 6885 aaKnown RBP5.67□□□□□ -1.5
SNX27-204ENST00000458013 PCLOQ9Y6V0 5065 aa5.65□□□□□ -1.51
SNX27-204ENST00000458013 BIRC6Q9NR09 4857 aa5.61□□□□□ -1.51
SNX27-204ENST00000458013 KRTAP2-3P0C7H8 128 aa5.54□□□□□ -1.52
SNX27-204ENST00000458013 KRTAP2-4Q9BYR9 128 aa5.54□□□□□ -1.52
SNX27-204ENST00000458013 KRTAP2-1Q9BYU5 128 aa5.54□□□□□ -1.52
SNX27-204ENST00000458013 KRTAP19-7Q3SYF9 63 aa5.53□□□□□ -1.52
SNX27-204ENST00000458013 MT1AP04731 61 aa5.49□□□□□ -1.53
SNX27-204ENST00000458013 KRTAP6-2Q3LI66 62 aa5.41□□□□□ -1.54
SNX27-204ENST00000458013 KRTAP6-1Q3LI64 71 aa5.4□□□□□ -1.55
SNX27-204ENST00000458013 KRTAP9-6A0A140TA67 174 aa5.4□□□□□ -1.55
SNX27-204ENST00000458013 KRTAP20-1Q3LI63 56 aa5.37□□□□□ -1.55
SNX27-204ENST00000458013 HMCN2Q8NDA2 5059 aa5.36□□□□□ -1.55
SNX27-204ENST00000458013 FSIP2Q5CZC0 6907 aa5.3□□□□□ -1.56
SNX27-204ENST00000458013 LCE1CQ5T751 118 aa5.3□□□□□ -1.56
SNX27-204ENST00000458013 LCE1EQ5T753 118 aa5.3□□□□□ -1.56
SNX27-204ENST00000458013 LCE1FQ5T754 118 aa5.3□□□□□ -1.56
SNX27-204ENST00000458013 LCE1AQ5T7P2 110 aa5.3□□□□□ -1.56
SNX27-204ENST00000458013 KRTAP9-7A8MTY7 169 aa5.28□□□□□ -1.56
SNX27-204ENST00000458013 KRTAP9-6A8MVA2 160 aa5.25□□□□□ -1.57
SNX27-204ENST00000458013 LCE2AQ5TA79 106 aaPredicted RBP5.21□□□□□ -1.57
SNX27-204ENST00000458013 KRTAP9-4Q9BYQ2 154 aa5.2□□□□□ -1.58
SNX27-204ENST00000458013 FAT4Q6V0I7 4981 aa5.18□□□□□ -1.58
SNX27-204ENST00000458013 EPPK1P58107 5090 aaKnown RBP5.17□□□□□ -1.58
SNX27-204ENST00000458013 ABCA13Q86UQ4 5058 aa5.14□□□□□ -1.59
SNX27-204ENST00000458013 MUC2Q02817 5179 aa4.98□□□□□ -1.61
SNX27-204ENST00000458013 RNF213Q63HN8 5207 aa4.97□□□□□ -1.61
SNX27-204ENST00000458013 KRTAP6-3Q3LI67 103 aa4.93□□□□□ -1.62
SNX27-204ENST00000458013 UBR4Q5T4S7 5183 aa4.92□□□□□ -1.62
SNX27-204ENST00000458013 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.92□□□□□ -1.62
SNX27-204ENST00000458013 LCE4AQ5TA78 99 aa4.88□□□□□ -1.63
SNX27-204ENST00000458013 KRTAP2-2Q9BYT5 123 aa4.78□□□□□ -1.64
SNX27-204ENST00000458013 KRTAP4-11Q9BYQ6 195 aa4.7□□□□□ -1.66
SNX27-204ENST00000458013 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
SNX27-204ENST00000458013 KMT2DO14686 5537 aa4.64□□□□□ -1.67
SNX27-204ENST00000458013 SYNE1Q8NF91 8797 aaKnown RBP4.63□□□□□ -1.67
SNX27-204ENST00000458013 KRTAP9-9Q9BYP9 154 aa4.54□□□□□ -1.68
SNX27-204ENST00000458013 KRTAP4-4Q9BYR3 166 aa4.47□□□□□ -1.69
SNX27-204ENST00000458013 KRTAP4-6Q9BYQ5 205 aa4.45□□□□□ -1.7
SNX27-204ENST00000458013 KRTAP20-2Q3LI61 65 aa4.43□□□□□ -1.7
SNX27-204ENST00000458013 KRTAP4-12Q9BQ66 201 aa4.33□□□□□ -1.72
SNX27-204ENST00000458013 KRTAP4-2Q9BYR5 136 aa4.33□□□□□ -1.72
SNX27-204ENST00000458013 FCGBPQ9Y6R7 5405 aaPredicted RBP4.33□□□□□ -1.72
SNX27-204ENST00000458013 USH2AO75445 5202 aa4.27□□□□□ -1.73
SNX27-204ENST00000458013 SSPOA2VEC9 5147 aa4.24□□□□□ -1.73
SNX27-204ENST00000458013 DSTQ03001 7570 aaKnown RBP4.22□□□□□ -1.73
SNX27-204ENST00000458013 MACF1Q9UPN3 7388 aaKnown RBP4.19□□□□□ -1.74
SNX27-204ENST00000458013 NEBP20929 6669 aa4.09□□□□□ -1.75
SNX27-204ENST00000458013 KRTAP5-9P26371 169 aa3.96□□□□□ -1.78
SNX27-204ENST00000458013 KRTAP5-5Q701N2 237 aaPredicted RBP3.92□□□□□ -1.78
SNX27-204ENST00000458013 MUC12Q9UKN1 5478 aa3.77□□□□□ -1.81
SNX27-204ENST00000458013 KRTAP5-4Q6L8H1 288 aa3.74□□□□□ -1.81
SNX27-204ENST00000458013 MUC19Q7Z5P9 8384 aa3.44□□□□□ -1.86
SNX27-204ENST00000458013 MDN1Q9NU22 5596 aa3.31□□□□□ -1.88
SNX27-204ENST00000458013 KRTAP5-3Q6L8H2 238 aa3.2□□□□□ -1.9
SNX27-204ENST00000458013 MUC5ACP98088 5654 aa3.11□□□□□ -1.91
SNX27-204ENST00000458013 KRTAP5-8O75690 187 aa3.1□□□□□ -1.91
SNX27-204ENST00000458013 PHGR1C9JFL3 82 aa3.06□□□□□ -1.92
SNX27-204ENST00000458013 KRTAP5-10Q6L8G5 202 aa2.99□□□□□ -1.93
SNX27-204ENST00000458013 KRTAP5-2Q701N4 177 aa2.97□□□□□ -1.93
SNX27-204ENST00000458013 HMCN1Q96RW7 5635 aa2.9□□□□□ -1.94
SNX27-204ENST00000458013 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
SNX27-204ENST00000458013 GPR98Q8WXG9 6306 aa2.71□□□□□ -1.98
SNX27-204ENST00000458013 MUC5BQ9HC84 5762 aaPredicted RBP2.6□□□□□ -1.99
SNX27-204ENST00000458013 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
SNX27-204ENST00000458013 KRTAP5-11Q6L8G4 156 aa2.45□□□□□ -2.02
SNX27-204ENST00000458013 AHNAK2Q8IVF2 5795 aa2.39□□□□□ -2.03
SNX27-204ENST00000458013 KRTAP21-1Q3LI58 79 aa2.33□□□□□ -2.04
SNX27-204ENST00000458013 AHNAKQ09666 5890 aaKnown RBP2.19□□□□□ -2.06
SNX27-204ENST00000458013 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.12□□□□□ -2.07
SNX27-204ENST00000458013 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
SNX27-204ENST00000458013 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 7.8 ms