RNA–Protein interactions for RNA: ENST00000455624.6

SCN5A-210, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 7,170 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-210ENST00000455624 LOC100996750A0A140TA64 210 aa3.1□□□□□ -1.91
SCN5A-210ENST00000455624 KRTAP19-6Q3LI70 58 aa3.09□□□□□ -1.91
SCN5A-210ENST00000455624 KRTAP9-6A0A140TA67 174 aa3.08□□□□□ -1.92
SCN5A-210ENST00000455624 EPPK1P58107 5090 aaKnown RBP3.05□□□□□ -1.92
SCN5A-210ENST00000455624 KRTAP20-1Q3LI63 56 aa3.05□□□□□ -1.92
SCN5A-210ENST00000455624 KRTAP19-2Q3LHN2 52 aa3.03□□□□□ -1.92
SCN5A-210ENST00000455624 KRTAP4-3Q9BYR4 195 aa3.02□□□□□ -1.93
SCN5A-210ENST00000455624 KIAA1109Q2LD37 5005 aa3.01□□□□□ -1.93
SCN5A-210ENST00000455624 LCE5AQ5TCM9 118 aa3□□□□□ -1.93
SCN5A-210ENST00000455624 KRTAP2-3P0C7H8 128 aa2.92□□□□□ -1.94
SCN5A-210ENST00000455624 KRTAP2-4Q9BYR9 128 aa2.92□□□□□ -1.94
SCN5A-210ENST00000455624 KRTAP2-1Q9BYU5 128 aa2.92□□□□□ -1.94
SCN5A-210ENST00000455624 MT1AP04731 61 aa2.92□□□□□ -1.94
SCN5A-210ENST00000455624 KRTAP9-7A8MTY7 169 aa2.89□□□□□ -1.95
SCN5A-210ENST00000455624 KRTAP6-3Q3LI67 103 aa2.87□□□□□ -1.95
SCN5A-210ENST00000455624 KRTAP4-9Q9BYQ8 210 aa2.86□□□□□ -1.95
SCN5A-210ENST00000455624 LCE1AQ5T7P2 110 aa2.85□□□□□ -1.95
SCN5A-210ENST00000455624 LCE4AQ5TA78 99 aa2.82□□□□□ -1.96
SCN5A-210ENST00000455624 KRTAP9-6A8MVA2 160 aa2.81□□□□□ -1.96
SCN5A-210ENST00000455624 SYNE2Q8WXH0 6885 aaKnown RBP2.8□□□□□ -1.96
SCN5A-210ENST00000455624 LCE2AQ5TA79 106 aaPredicted RBP2.8□□□□□ -1.96
SCN5A-210ENST00000455624 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
SCN5A-210ENST00000455624 LCE1EQ5T753 118 aa2.79□□□□□ -1.96
SCN5A-210ENST00000455624 LCE1FQ5T754 118 aa2.79□□□□□ -1.96
SCN5A-210ENST00000455624 ABCA13Q86UQ4 5058 aa2.77□□□□□ -1.97
SCN5A-210ENST00000455624 KRTAP2-2Q9BYT5 123 aa2.77□□□□□ -1.97
SCN5A-210ENST00000455624 KRTAP19-7Q3SYF9 63 aa2.77□□□□□ -1.97
SCN5A-210ENST00000455624 KRTAP9-4Q9BYQ2 154 aa2.76□□□□□ -1.97
SCN5A-210ENST00000455624 KRTAP6-2Q3LI66 62 aa2.75□□□□□ -1.97
SCN5A-210ENST00000455624 KRTAP6-1Q3LI64 71 aa2.71□□□□□ -1.98
SCN5A-210ENST00000455624 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.7□□□□□ -1.98
SCN5A-210ENST00000455624 HMCN2Q8NDA2 5059 aa2.69□□□□□ -1.98
SCN5A-210ENST00000455624 RNF213Q63HN8 5207 aa2.69□□□□□ -1.98
SCN5A-210ENST00000455624 SYNE1Q8NF91 8797 aaKnown RBP2.67□□□□□ -1.98
SCN5A-210ENST00000455624 FSIP2Q5CZC0 6907 aa2.64□□□□□ -1.99
SCN5A-210ENST00000455624 UBR4Q5T4S7 5183 aa2.59□□□□□ -1.99
SCN5A-210ENST00000455624 KRTAP9-9Q9BYP9 154 aa2.56□□□□□ -2
SCN5A-210ENST00000455624 FAT4Q6V0I7 4981 aa2.55□□□□□ -2
SCN5A-210ENST00000455624 MUC2Q02817 5179 aa2.55□□□□□ -2
SCN5A-210ENST00000455624 OBSCNQ5VST9 7968 aa2.49□□□□□ -2.01
SCN5A-210ENST00000455624 KMT2DO14686 5537 aa2.42□□□□□ -2.02
SCN5A-210ENST00000455624 NEBP20929 6669 aa2.39□□□□□ -2.03
SCN5A-210ENST00000455624 GPR98Q8WXG9 6306 aa2.33□□□□□ -2.04
SCN5A-210ENST00000455624 KRTAP4-11Q9BYQ6 195 aa2.3□□□□□ -2.04
SCN5A-210ENST00000455624 KRTAP20-2Q3LI61 65 aa2.29□□□□□ -2.04
SCN5A-210ENST00000455624 KRTAP5-5Q701N2 237 aaPredicted RBP2.27□□□□□ -2.05
SCN5A-210ENST00000455624 MUC12Q9UKN1 5478 aa2.24□□□□□ -2.05
SCN5A-210ENST00000455624 KRTAP5-9P26371 169 aa2.23□□□□□ -2.05
SCN5A-210ENST00000455624 KRTAP4-6Q9BYQ5 205 aa2.21□□□□□ -2.06
SCN5A-210ENST00000455624 MACF1Q9UPN3 7388 aaKnown RBP2.2□□□□□ -2.06
SCN5A-210ENST00000455624 USH2AO75445 5202 aa2.19□□□□□ -2.06
SCN5A-210ENST00000455624 KRTAP4-4Q9BYR3 166 aa2.16□□□□□ -2.06
SCN5A-210ENST00000455624 KRTAP4-12Q9BQ66 201 aa2.13□□□□□ -2.07
SCN5A-210ENST00000455624 KRTAP4-2Q9BYR5 136 aa2.13□□□□□ -2.07
SCN5A-210ENST00000455624 SSPOA2VEC9 5147 aa2.13□□□□□ -2.07
SCN5A-210ENST00000455624 MDN1Q9NU22 5596 aa2.12□□□□□ -2.07
SCN5A-210ENST00000455624 DSTQ03001 7570 aaKnown RBP2.1□□□□□ -2.07
SCN5A-210ENST00000455624 KRTAP5-4Q6L8H1 288 aa2.09□□□□□ -2.07
SCN5A-210ENST00000455624 FCGBPQ9Y6R7 5405 aaPredicted RBP2.09□□□□□ -2.08
SCN5A-210ENST00000455624 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
SCN5A-210ENST00000455624 AHNAK2Q8IVF2 5795 aa1.95□□□□□ -2.1
SCN5A-210ENST00000455624 KRTAP5-3Q6L8H2 238 aa1.82□□□□□ -2.12
SCN5A-210ENST00000455624 HMCN1Q96RW7 5635 aa1.79□□□□□ -2.12
SCN5A-210ENST00000455624 MUC5ACP98088 5654 aa1.75□□□□□ -2.13
SCN5A-210ENST00000455624 PHGR1C9JFL3 82 aa1.67□□□□□ -2.14
SCN5A-210ENST00000455624 KRTAP5-8O75690 187 aa1.62□□□□□ -2.15
SCN5A-210ENST00000455624 KRTAP5-10Q6L8G5 202 aa1.62□□□□□ -2.15
SCN5A-210ENST00000455624 AHNAKQ09666 5890 aaKnown RBP1.53□□□□□ -2.16
SCN5A-210ENST00000455624 MUC5BQ9HC84 5762 aaPredicted RBP1.51□□□□□ -2.17
SCN5A-210ENST00000455624 KRTAP5-2Q701N4 177 aa1.5□□□□□ -2.17
SCN5A-210ENST00000455624 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
SCN5A-210ENST00000455624 KRTAP5-11Q6L8G4 156 aa1.41□□□□□ -2.18
SCN5A-210ENST00000455624 KRTAP5-1Q6L8H4 278 aa1.38□□□□□ -2.19
SCN5A-210ENST00000455624 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
SCN5A-210ENST00000455624 KRTAP5-7Q6L8G8 165 aa1.18□□□□□ -2.22
SCN5A-210ENST00000455624 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.14□□□□□ -2.23
SCN5A-210ENST00000455624 MUC16Q8WXI7 14507 aa1.01□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 72.9 ms