RNA–Protein interactions for RNA: ENST00000453985.6

ABCA9-202, Transcript of ATP binding cassette subfamily A member 9, humanhuman

TSL 5 BASIC

Gene ABCA9, Length 6,116 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9-202ENST00000453985 SYNE1Q8NF91 8797 aaKnown RBP2.73□□□□□ -1.97
ABCA9-202ENST00000453985 MT1LQ93083 61 aa2.73□□□□□ -1.97
ABCA9-202ENST00000453985 MT1EP04732 61 aa2.72□□□□□ -1.97
ABCA9-202ENST00000453985 KRTAP4-7Q9BYR0 210 aa2.72□□□□□ -1.97
ABCA9-202ENST00000453985 LCE2AQ5TA79 106 aaPredicted RBP2.72□□□□□ -1.97
ABCA9-202ENST00000453985 FAT4Q6V0I7 4981 aa2.72□□□□□ -1.97
ABCA9-202ENST00000453985 KRTAP19-6Q3LI70 58 aa2.72□□□□□ -1.97
ABCA9-202ENST00000453985 FSIP2Q5CZC0 6907 aa2.7□□□□□ -1.98
ABCA9-202ENST00000453985 KRTAP9-2Q9BYQ4 174 aa2.69□□□□□ -1.98
ABCA9-202ENST00000453985 RNF213Q63HN8 5207 aa2.68□□□□□ -1.98
ABCA9-202ENST00000453985 LCE5AQ5TCM9 118 aa2.66□□□□□ -1.98
ABCA9-202ENST00000453985 HMCN2Q8NDA2 5059 aa2.65□□□□□ -1.99
ABCA9-202ENST00000453985 MT1MQ8N339 61 aa2.63□□□□□ -1.99
ABCA9-202ENST00000453985 KRTAP9-6A0A140TA67 174 aa2.59□□□□□ -1.99
ABCA9-202ENST00000453985 LOC100996750A0A140TA64 210 aa2.59□□□□□ -1.99
ABCA9-202ENST00000453985 KRTAP19-7Q3SYF9 63 aa2.57□□□□□ -2
ABCA9-202ENST00000453985 MUC2Q02817 5179 aa2.56□□□□□ -2
ABCA9-202ENST00000453985 KRTAP4-3Q9BYR4 195 aa2.55□□□□□ -2
ABCA9-202ENST00000453985 LCE1CQ5T751 118 aa2.54□□□□□ -2
ABCA9-202ENST00000453985 LCE1EQ5T753 118 aa2.54□□□□□ -2
ABCA9-202ENST00000453985 LCE1FQ5T754 118 aa2.54□□□□□ -2
ABCA9-202ENST00000453985 LCE1AQ5T7P2 110 aa2.54□□□□□ -2
ABCA9-202ENST00000453985 KRTAP4-9Q9BYQ8 210 aa2.49□□□□□ -2.01
ABCA9-202ENST00000453985 KRTAP20-1Q3LI63 56 aa2.48□□□□□ -2.01
ABCA9-202ENST00000453985 KRTAP9-7A8MTY7 169 aa2.45□□□□□ -2.02
ABCA9-202ENST00000453985 SYNE2Q8WXH0 6885 aaKnown RBP2.45□□□□□ -2.02
ABCA9-202ENST00000453985 MT1AP04731 61 aa2.42□□□□□ -2.02
ABCA9-202ENST00000453985 OBSCNQ5VST9 7968 aa2.41□□□□□ -2.02
ABCA9-202ENST00000453985 KRTAP2-3P0C7H8 128 aa2.4□□□□□ -2.03
ABCA9-202ENST00000453985 KRTAP2-4Q9BYR9 128 aa2.4□□□□□ -2.03
ABCA9-202ENST00000453985 KRTAP2-1Q9BYU5 128 aa2.4□□□□□ -2.03
ABCA9-202ENST00000453985 KRTAP6-3Q3LI67 103 aa2.38□□□□□ -2.03
ABCA9-202ENST00000453985 LCE4AQ5TA78 99 aa2.36□□□□□ -2.03
ABCA9-202ENST00000453985 KRTAP6-2Q3LI66 62 aa2.35□□□□□ -2.03
ABCA9-202ENST00000453985 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.34□□□□□ -2.03
ABCA9-202ENST00000453985 KRTAP9-6A8MVA2 160 aa2.32□□□□□ -2.04
ABCA9-202ENST00000453985 FCGBPQ9Y6R7 5405 aaPredicted RBP2.3□□□□□ -2.04
ABCA9-202ENST00000453985 KRTAP6-1Q3LI64 71 aa2.29□□□□□ -2.04
ABCA9-202ENST00000453985 USH2AO75445 5202 aa2.28□□□□□ -2.04
ABCA9-202ENST00000453985 DSTQ03001 7570 aaKnown RBP2.27□□□□□ -2.05
ABCA9-202ENST00000453985 KRTAP9-4Q9BYQ2 154 aa2.23□□□□□ -2.05
ABCA9-202ENST00000453985 KRTAP2-2Q9BYT5 123 aa2.23□□□□□ -2.05
ABCA9-202ENST00000453985 MACF1Q9UPN3 7388 aaKnown RBP2.21□□□□□ -2.05
ABCA9-202ENST00000453985 KMT2DO14686 5537 aa2.21□□□□□ -2.06
ABCA9-202ENST00000453985 KRTAP9-9Q9BYP9 154 aa2.14□□□□□ -2.07
ABCA9-202ENST00000453985 KRTAP5-9P26371 169 aa2.1□□□□□ -2.07
ABCA9-202ENST00000453985 MUC12Q9UKN1 5478 aa2.09□□□□□ -2.07
ABCA9-202ENST00000453985 SSPOA2VEC9 5147 aa2.07□□□□□ -2.08
ABCA9-202ENST00000453985 KRTAP4-11Q9BYQ6 195 aa2.06□□□□□ -2.08
ABCA9-202ENST00000453985 KRTAP20-2Q3LI61 65 aa2.04□□□□□ -2.08
ABCA9-202ENST00000453985 MUC19Q7Z5P9 8384 aa2.03□□□□□ -2.08
ABCA9-202ENST00000453985 MDN1Q9NU22 5596 aa2.02□□□□□ -2.09
ABCA9-202ENST00000453985 NEBP20929 6669 aa2□□□□□ -2.09
ABCA9-202ENST00000453985 GPR98Q8WXG9 6306 aa1.98□□□□□ -2.09
ABCA9-202ENST00000453985 KRTAP4-6Q9BYQ5 205 aa1.96□□□□□ -2.1
ABCA9-202ENST00000453985 KRTAP4-4Q9BYR3 166 aa1.92□□□□□ -2.1
ABCA9-202ENST00000453985 KRTAP4-12Q9BQ66 201 aa1.88□□□□□ -2.11
ABCA9-202ENST00000453985 KRTAP4-2Q9BYR5 136 aa1.88□□□□□ -2.11
ABCA9-202ENST00000453985 KRTAP5-4Q6L8H1 288 aa1.78□□□□□ -2.12
ABCA9-202ENST00000453985 KRTAP5-5Q701N2 237 aaPredicted RBP1.76□□□□□ -2.13
ABCA9-202ENST00000453985 MUC5ACP98088 5654 aa1.65□□□□□ -2.14
ABCA9-202ENST00000453985 KRTAP5-3Q6L8H2 238 aa1.6□□□□□ -2.15
ABCA9-202ENST00000453985 HMCN1Q96RW7 5635 aa1.59□□□□□ -2.15
ABCA9-202ENST00000453985 AHNAK2Q8IVF2 5795 aa1.52□□□□□ -2.17
ABCA9-202ENST00000453985 KRTAP5-2Q701N4 177 aa1.47□□□□□ -2.17
ABCA9-202ENST00000453985 KRTAP5-8O75690 187 aa1.46□□□□□ -2.18
ABCA9-202ENST00000453985 PHGR1C9JFL3 82 aa1.43□□□□□ -2.18
ABCA9-202ENST00000453985 KRTAP5-10Q6L8G5 202 aa1.38□□□□□ -2.19
ABCA9-202ENST00000453985 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.33□□□□□ -2.2
ABCA9-202ENST00000453985 MUC5BQ9HC84 5762 aaPredicted RBP1.3□□□□□ -2.2
ABCA9-202ENST00000453985 KRTAP5-1Q6L8H4 278 aa1.29□□□□□ -2.2
ABCA9-202ENST00000453985 AHNAKQ09666 5890 aaKnown RBP1.29□□□□□ -2.2
ABCA9-202ENST00000453985 KRTAP5-11Q6L8G4 156 aa1.28□□□□□ -2.2
ABCA9-202ENST00000453985 KRTAP21-2Q3LI59 83 aa1.22□□□□□ -2.21
ABCA9-202ENST00000453985 KRTAP5-7Q6L8G8 165 aa1.2□□□□□ -2.22
ABCA9-202ENST00000453985 KRTAP21-1Q3LI58 79 aa1.1□□□□□ -2.23
ABCA9-202ENST00000453985 MUC16Q8WXI7 14507 aa0.78□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 12.7 ms