RNA–Protein interactions for RNA: ENST00000450102.6

SCN5A-208, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 6,284 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-208ENST00000450102 KRTAP9-6A0A140TA67 174 aa3.28□□□□□ -1.88
SCN5A-208ENST00000450102 LOC100996750A0A140TA64 210 aa3.27□□□□□ -1.89
SCN5A-208ENST00000450102 KRTAP20-1Q3LI63 56 aa3.25□□□□□ -1.89
SCN5A-208ENST00000450102 LRP2P98164 4655 aa3.23□□□□□ -1.89
SCN5A-208ENST00000450102 KRTAP19-2Q3LHN2 52 aa3.22□□□□□ -1.89
SCN5A-208ENST00000450102 KRTAP4-3Q9BYR4 195 aa3.2□□□□□ -1.9
SCN5A-208ENST00000450102 KRTAP19-6Q3LI70 58 aa3.18□□□□□ -1.9
SCN5A-208ENST00000450102 SYNE1Q8NF91 8797 aaKnown RBP3.14□□□□□ -1.91
SCN5A-208ENST00000450102 ABCA13Q86UQ4 5058 aa3.13□□□□□ -1.91
SCN5A-208ENST00000450102 MUC17Q685J3 4493 aa3.13□□□□□ -1.91
SCN5A-208ENST00000450102 LCE1CQ5T751 118 aa3.12□□□□□ -1.91
SCN5A-208ENST00000450102 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
SCN5A-208ENST00000450102 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
SCN5A-208ENST00000450102 LCE1AQ5T7P2 110 aa3.12□□□□□ -1.91
SCN5A-208ENST00000450102 FSIP2Q5CZC0 6907 aa3.1□□□□□ -1.91
SCN5A-208ENST00000450102 MT1AP04731 61 aa3.09□□□□□ -1.91
SCN5A-208ENST00000450102 KRTAP9-7A8MTY7 169 aa3.09□□□□□ -1.92
SCN5A-208ENST00000450102 KRTAP4-9Q9BYQ8 210 aa3.09□□□□□ -1.92
SCN5A-208ENST00000450102 FLGP20930 4061 aaPredicted RBP3.06□□□□□ -1.92
SCN5A-208ENST00000450102 KRTAP2-3P0C7H8 128 aa3.03□□□□□ -1.92
SCN5A-208ENST00000450102 KRTAP2-4Q9BYR9 128 aa3.03□□□□□ -1.92
SCN5A-208ENST00000450102 KRTAP2-1Q9BYU5 128 aa3.03□□□□□ -1.92
SCN5A-208ENST00000450102 MUC2Q02817 5179 aa3□□□□□ -1.93
SCN5A-208ENST00000450102 LCE2AQ5TA79 106 aaPredicted RBP2.97□□□□□ -1.93
SCN5A-208ENST00000450102 UBR4Q5T4S7 5183 aa2.96□□□□□ -1.94
SCN5A-208ENST00000450102 RNF213Q63HN8 5207 aa2.94□□□□□ -1.94
SCN5A-208ENST00000450102 KRTAP6-2Q3LI66 62 aa2.93□□□□□ -1.94
SCN5A-208ENST00000450102 KRTAP19-7Q3SYF9 63 aa2.9□□□□□ -1.94
SCN5A-208ENST00000450102 KRTAP6-3Q3LI67 103 aa2.89□□□□□ -1.95
SCN5A-208ENST00000450102 LCE4AQ5TA78 99 aa2.89□□□□□ -1.95
SCN5A-208ENST00000450102 FAT4Q6V0I7 4981 aa2.87□□□□□ -1.95
SCN5A-208ENST00000450102 KRTAP9-4Q9BYQ2 154 aa2.86□□□□□ -1.95
SCN5A-208ENST00000450102 SYNE2Q8WXH0 6885 aaKnown RBP2.86□□□□□ -1.95
SCN5A-208ENST00000450102 KRTAP2-2Q9BYT5 123 aa2.86□□□□□ -1.95
SCN5A-208ENST00000450102 KRTAP6-1Q3LI64 71 aa2.86□□□□□ -1.95
SCN5A-208ENST00000450102 HMCN2Q8NDA2 5059 aa2.83□□□□□ -1.96
SCN5A-208ENST00000450102 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.81□□□□□ -1.96
SCN5A-208ENST00000450102 OBSCNQ5VST9 7968 aa2.77□□□□□ -1.97
SCN5A-208ENST00000450102 KRTAP9-9Q9BYP9 154 aa2.73□□□□□ -1.97
SCN5A-208ENST00000450102 KRTAP9-6A8MVA2 160 aa2.64□□□□□ -1.99
SCN5A-208ENST00000450102 DSTQ03001 7570 aaKnown RBP2.59□□□□□ -1.99
SCN5A-208ENST00000450102 USH2AO75445 5202 aa2.54□□□□□ -2
SCN5A-208ENST00000450102 KRTAP4-11Q9BYQ6 195 aa2.52□□□□□ -2.01
SCN5A-208ENST00000450102 MACF1Q9UPN3 7388 aaKnown RBP2.51□□□□□ -2.01
SCN5A-208ENST00000450102 KRTAP20-2Q3LI61 65 aa2.51□□□□□ -2.01
SCN5A-208ENST00000450102 GPR98Q8WXG9 6306 aa2.5□□□□□ -2.01
SCN5A-208ENST00000450102 KMT2DO14686 5537 aa2.46□□□□□ -2.02
SCN5A-208ENST00000450102 NEBP20929 6669 aa2.44□□□□□ -2.02
SCN5A-208ENST00000450102 FCGBPQ9Y6R7 5405 aaPredicted RBP2.38□□□□□ -2.03
SCN5A-208ENST00000450102 KRTAP5-9P26371 169 aa2.37□□□□□ -2.03
SCN5A-208ENST00000450102 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
SCN5A-208ENST00000450102 KRTAP4-12Q9BQ66 201 aa2.34□□□□□ -2.04
SCN5A-208ENST00000450102 KRTAP4-2Q9BYR5 136 aa2.34□□□□□ -2.04
SCN5A-208ENST00000450102 KRTAP4-6Q9BYQ5 205 aa2.33□□□□□ -2.04
SCN5A-208ENST00000450102 MUC12Q9UKN1 5478 aa2.33□□□□□ -2.04
SCN5A-208ENST00000450102 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
SCN5A-208ENST00000450102 MDN1Q9NU22 5596 aa2.31□□□□□ -2.04
SCN5A-208ENST00000450102 SSPOA2VEC9 5147 aa2.27□□□□□ -2.05
SCN5A-208ENST00000450102 KRTAP5-4Q6L8H1 288 aa2.11□□□□□ -2.07
SCN5A-208ENST00000450102 KRTAP5-5Q701N2 237 aaPredicted RBP2.07□□□□□ -2.08
SCN5A-208ENST00000450102 AHNAK2Q8IVF2 5795 aa2.04□□□□□ -2.08
SCN5A-208ENST00000450102 KRTAP5-3Q6L8H2 238 aa1.86□□□□□ -2.11
SCN5A-208ENST00000450102 HMCN1Q96RW7 5635 aa1.85□□□□□ -2.11
SCN5A-208ENST00000450102 PHGR1C9JFL3 82 aa1.84□□□□□ -2.11
SCN5A-208ENST00000450102 MUC5ACP98088 5654 aa1.82□□□□□ -2.12
SCN5A-208ENST00000450102 KRTAP5-8O75690 187 aa1.68□□□□□ -2.14
SCN5A-208ENST00000450102 KRTAP5-2Q701N4 177 aa1.63□□□□□ -2.15
SCN5A-208ENST00000450102 KRTAP5-10Q6L8G5 202 aa1.59□□□□□ -2.15
SCN5A-208ENST00000450102 AHNAKQ09666 5890 aaKnown RBP1.59□□□□□ -2.16
SCN5A-208ENST00000450102 MUC5BQ9HC84 5762 aaPredicted RBP1.57□□□□□ -2.16
SCN5A-208ENST00000450102 KRTAP5-11Q6L8G4 156 aa1.5□□□□□ -2.17
SCN5A-208ENST00000450102 KRTAP5-1Q6L8H4 278 aa1.44□□□□□ -2.18
SCN5A-208ENST00000450102 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.37□□□□□ -2.19
SCN5A-208ENST00000450102 KRTAP21-2Q3LI59 83 aa1.37□□□□□ -2.19
SCN5A-208ENST00000450102 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
SCN5A-208ENST00000450102 KRTAP5-7Q6L8G8 165 aa1.23□□□□□ -2.21
SCN5A-208ENST00000450102 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 58.2 ms