RNA–Protein interactions for RNA: ENST00000449193.6

SKIDA1-202, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS P2 TSL 3 BASIC

Gene SKIDA1, Length 6,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-202ENST00000449193 PRM1P04553 51 aa5.29□□□□□ -1.56
SKIDA1-202ENST00000449193 KRTAP4-3Q9BYR4 195 aa5.28□□□□□ -1.56
SKIDA1-202ENST00000449193 KMT2CQ8NEZ4 4911 aaKnown RBP5.26□□□□□ -1.57
SKIDA1-202ENST00000449193 FLGP20930 4061 aaPredicted RBP5.25□□□□□ -1.57
SKIDA1-202ENST00000449193 MUC17Q685J3 4493 aa5.22□□□□□ -1.57
SKIDA1-202ENST00000449193 HYDINQ4G0P3 5121 aa5.22□□□□□ -1.57
SKIDA1-202ENST00000449193 LCE2AQ5TA79 106 aaPredicted RBP5.21□□□□□ -1.57
SKIDA1-202ENST00000449193 MT1AP04731 61 aa5.21□□□□□ -1.58
SKIDA1-202ENST00000449193 KRTAP20-1Q3LI63 56 aa5.19□□□□□ -1.58
SKIDA1-202ENST00000449193 KRTAP19-7Q3SYF9 63 aa5.13□□□□□ -1.59
SKIDA1-202ENST00000449193 TNXBP22105 4242 aa5.13□□□□□ -1.59
SKIDA1-202ENST00000449193 ABCA13Q86UQ4 5058 aa5.12□□□□□ -1.59
SKIDA1-202ENST00000449193 LCE5AQ5TCM9 118 aa5.08□□□□□ -1.6
SKIDA1-202ENST00000449193 SYNE1Q8NF91 8797 aaKnown RBP5.07□□□□□ -1.6
SKIDA1-202ENST00000449193 KRTAP9-7A8MTY7 169 aa5.05□□□□□ -1.6
SKIDA1-202ENST00000449193 KRTAP2-3P0C7H8 128 aa5.03□□□□□ -1.6
SKIDA1-202ENST00000449193 KRTAP2-4Q9BYR9 128 aa5.03□□□□□ -1.6
SKIDA1-202ENST00000449193 KRTAP2-1Q9BYU5 128 aa5.03□□□□□ -1.6
SKIDA1-202ENST00000449193 LCE1AQ5T7P2 110 aa5.03□□□□□ -1.6
SKIDA1-202ENST00000449193 KRTAP6-3Q3LI67 103 aa5.01□□□□□ -1.61
SKIDA1-202ENST00000449193 RNF213Q63HN8 5207 aa4.94□□□□□ -1.62
SKIDA1-202ENST00000449193 KRTAP4-9Q9BYQ8 210 aa4.92□□□□□ -1.62
SKIDA1-202ENST00000449193 FAT4Q6V0I7 4981 aa4.9□□□□□ -1.63
SKIDA1-202ENST00000449193 LCE4AQ5TA78 99 aa4.88□□□□□ -1.63
SKIDA1-202ENST00000449193 UBR4Q5T4S7 5183 aa4.85□□□□□ -1.63
SKIDA1-202ENST00000449193 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.81□□□□□ -1.64
SKIDA1-202ENST00000449193 KRTAP6-2Q3LI66 62 aa4.81□□□□□ -1.64
SKIDA1-202ENST00000449193 FSIP2Q5CZC0 6907 aa4.8□□□□□ -1.64
SKIDA1-202ENST00000449193 SYNE2Q8WXH0 6885 aaKnown RBP4.8□□□□□ -1.64
SKIDA1-202ENST00000449193 HMCN2Q8NDA2 5059 aa4.8□□□□□ -1.64
SKIDA1-202ENST00000449193 KRTAP2-2Q9BYT5 123 aa4.8□□□□□ -1.64
SKIDA1-202ENST00000449193 KRTAP9-4Q9BYQ2 154 aa4.79□□□□□ -1.64
SKIDA1-202ENST00000449193 KRTAP6-1Q3LI64 71 aa4.78□□□□□ -1.64
SKIDA1-202ENST00000449193 MUC2Q02817 5179 aa4.74□□□□□ -1.65
SKIDA1-202ENST00000449193 LCE1CQ5T751 118 aa4.66□□□□□ -1.66
SKIDA1-202ENST00000449193 LCE1EQ5T753 118 aa4.66□□□□□ -1.66
SKIDA1-202ENST00000449193 LCE1FQ5T754 118 aa4.66□□□□□ -1.66
SKIDA1-202ENST00000449193 OBSCNQ5VST9 7968 aa4.64□□□□□ -1.67
SKIDA1-202ENST00000449193 KRTAP9-6A8MVA2 160 aa4.55□□□□□ -1.68
SKIDA1-202ENST00000449193 KRTAP9-9Q9BYP9 154 aa4.34□□□□□ -1.71
SKIDA1-202ENST00000449193 USH2AO75445 5202 aa4.13□□□□□ -1.75
SKIDA1-202ENST00000449193 KRTAP5-9P26371 169 aa4.09□□□□□ -1.75
SKIDA1-202ENST00000449193 NEBP20929 6669 aa4.02□□□□□ -1.77
SKIDA1-202ENST00000449193 FCGBPQ9Y6R7 5405 aaPredicted RBP4.01□□□□□ -1.77
SKIDA1-202ENST00000449193 DSTQ03001 7570 aaKnown RBP4.01□□□□□ -1.77
SKIDA1-202ENST00000449193 KRTAP4-6Q9BYQ5 205 aa3.97□□□□□ -1.77
SKIDA1-202ENST00000449193 KRTAP20-2Q3LI61 65 aa3.97□□□□□ -1.77
SKIDA1-202ENST00000449193 MACF1Q9UPN3 7388 aaKnown RBP3.94□□□□□ -1.78
SKIDA1-202ENST00000449193 KRTAP4-11Q9BYQ6 195 aa3.87□□□□□ -1.79
SKIDA1-202ENST00000449193 SSPOA2VEC9 5147 aa3.81□□□□□ -1.8
SKIDA1-202ENST00000449193 KMT2DO14686 5537 aa3.79□□□□□ -1.8
SKIDA1-202ENST00000449193 KRTAP5-4Q6L8H1 288 aa3.7□□□□□ -1.82
SKIDA1-202ENST00000449193 GPR98Q8WXG9 6306 aa3.69□□□□□ -1.82
SKIDA1-202ENST00000449193 MUC19Q7Z5P9 8384 aa3.68□□□□□ -1.82
SKIDA1-202ENST00000449193 KRTAP4-12Q9BQ66 201 aa3.64□□□□□ -1.83
SKIDA1-202ENST00000449193 KRTAP4-2Q9BYR5 136 aa3.64□□□□□ -1.83
SKIDA1-202ENST00000449193 KRTAP4-4Q9BYR3 166 aa3.64□□□□□ -1.83
SKIDA1-202ENST00000449193 MDN1Q9NU22 5596 aa3.62□□□□□ -1.83
SKIDA1-202ENST00000449193 MUC12Q9UKN1 5478 aa3.53□□□□□ -1.84
SKIDA1-202ENST00000449193 KRTAP5-5Q701N2 237 aaPredicted RBP3.33□□□□□ -1.88
SKIDA1-202ENST00000449193 KRTAP5-3Q6L8H2 238 aa3.23□□□□□ -1.89
SKIDA1-202ENST00000449193 MUC5ACP98088 5654 aa3.05□□□□□ -1.92
SKIDA1-202ENST00000449193 AHNAK2Q8IVF2 5795 aa3□□□□□ -1.93
SKIDA1-202ENST00000449193 KRTAP5-8O75690 187 aa2.95□□□□□ -1.94
SKIDA1-202ENST00000449193 HMCN1Q96RW7 5635 aa2.88□□□□□ -1.95
SKIDA1-202ENST00000449193 PHGR1C9JFL3 82 aa2.83□□□□□ -1.96
SKIDA1-202ENST00000449193 KRTAP5-10Q6L8G5 202 aa2.75□□□□□ -1.97
SKIDA1-202ENST00000449193 KRTAP5-2Q701N4 177 aa2.72□□□□□ -1.97
SKIDA1-202ENST00000449193 MUC5BQ9HC84 5762 aaPredicted RBP2.63□□□□□ -1.99
SKIDA1-202ENST00000449193 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
SKIDA1-202ENST00000449193 AHNAKQ09666 5890 aaKnown RBP2.49□□□□□ -2.01
SKIDA1-202ENST00000449193 KRTAP5-1Q6L8H4 278 aa2.47□□□□□ -2.01
SKIDA1-202ENST00000449193 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
SKIDA1-202ENST00000449193 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.16□□□□□ -2.06
SKIDA1-202ENST00000449193 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
SKIDA1-202ENST00000449193 KRTAP5-7Q6L8G8 165 aa2.07□□□□□ -2.08
SKIDA1-202ENST00000449193 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 64.9 ms