RNA–Protein interactions for RNA: ENST00000437941.6

SSX2IP-203, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 2 BASIC

Gene SSX2IP, Length 5,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-203ENST00000437941 MUC17Q685J3 4493 aa6.8□□□□□ -1.32
SSX2IP-203ENST00000437941 LCE2AQ5TA79 106 aaPredicted RBP6.77□□□□□ -1.32
SSX2IP-203ENST00000437941 FLGP20930 4061 aaPredicted RBP6.77□□□□□ -1.33
SSX2IP-203ENST00000437941 LOC100996750A0A140TA64 210 aa6.7□□□□□ -1.34
SSX2IP-203ENST00000437941 KRTAP4-3Q9BYR4 195 aa6.68□□□□□ -1.34
SSX2IP-203ENST00000437941 LCE1BQ5T7P3 118 aa6.67□□□□□ -1.34
SSX2IP-203ENST00000437941 TNXBP22105 4242 aa6.67□□□□□ -1.34
SSX2IP-203ENST00000437941 LCE1DQ5T752 114 aa6.65□□□□□ -1.34
SSX2IP-203ENST00000437941 SYNE1Q8NF91 8797 aaKnown RBP6.6□□□□□ -1.35
SSX2IP-203ENST00000437941 KRTAP20-1Q3LI63 56 aa6.58□□□□□ -1.36
SSX2IP-203ENST00000437941 RNF213Q63HN8 5207 aa6.53□□□□□ -1.36
SSX2IP-203ENST00000437941 MT1AP04731 61 aa6.53□□□□□ -1.36
SSX2IP-203ENST00000437941 KRTAP19-7Q3SYF9 63 aa6.53□□□□□ -1.36
SSX2IP-203ENST00000437941 UBR4Q5T4S7 5183 aa6.52□□□□□ -1.37
SSX2IP-203ENST00000437941 PRM1P04553 51 aa6.5□□□□□ -1.37
SSX2IP-203ENST00000437941 KRTAP9-7A8MTY7 169 aa6.49□□□□□ -1.37
SSX2IP-203ENST00000437941 FAT4Q6V0I7 4981 aa6.48□□□□□ -1.37
SSX2IP-203ENST00000437941 FSIP2Q5CZC0 6907 aa6.42□□□□□ -1.38
SSX2IP-203ENST00000437941 KRTAP6-3Q3LI67 103 aa6.4□□□□□ -1.38
SSX2IP-203ENST00000437941 LCE1AQ5T7P2 110 aa6.38□□□□□ -1.39
SSX2IP-203ENST00000437941 KRTAP2-3P0C7H8 128 aa6.31□□□□□ -1.4
SSX2IP-203ENST00000437941 KRTAP2-4Q9BYR9 128 aa6.31□□□□□ -1.4
SSX2IP-203ENST00000437941 LCE5AQ5TCM9 118 aa6.31□□□□□ -1.4
SSX2IP-203ENST00000437941 KRTAP2-1Q9BYU5 128 aa6.3□□□□□ -1.4
SSX2IP-203ENST00000437941 SYNE2Q8WXH0 6885 aaKnown RBP6.28□□□□□ -1.4
SSX2IP-203ENST00000437941 HMCN2Q8NDA2 5059 aa6.26□□□□□ -1.41
SSX2IP-203ENST00000437941 MUC2Q02817 5179 aa6.24□□□□□ -1.41
SSX2IP-203ENST00000437941 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.19□□□□□ -1.42
SSX2IP-203ENST00000437941 KRTAP4-9Q9BYQ8 210 aa6.17□□□□□ -1.42
SSX2IP-203ENST00000437941 LCE4AQ5TA78 99 aa6.14□□□□□ -1.43
SSX2IP-203ENST00000437941 KRTAP2-2Q9BYT5 123 aa6.1□□□□□ -1.43
SSX2IP-203ENST00000437941 KRTAP6-2Q3LI66 62 aa6.03□□□□□ -1.44
SSX2IP-203ENST00000437941 KRTAP6-1Q3LI64 71 aa6.03□□□□□ -1.44
SSX2IP-203ENST00000437941 KRTAP9-4Q9BYQ2 154 aa6.01□□□□□ -1.45
SSX2IP-203ENST00000437941 OBSCNQ5VST9 7968 aa5.99□□□□□ -1.45
SSX2IP-203ENST00000437941 KRTAP9-6A8MVA2 160 aa5.77□□□□□ -1.49
SSX2IP-203ENST00000437941 LCE1CQ5T751 118 aa5.76□□□□□ -1.49
SSX2IP-203ENST00000437941 LCE1EQ5T753 118 aa5.76□□□□□ -1.49
SSX2IP-203ENST00000437941 LCE1FQ5T754 118 aa5.76□□□□□ -1.49
SSX2IP-203ENST00000437941 USH2AO75445 5202 aa5.47□□□□□ -1.53
SSX2IP-203ENST00000437941 KRTAP9-9Q9BYP9 154 aa5.44□□□□□ -1.54
SSX2IP-203ENST00000437941 FCGBPQ9Y6R7 5405 aaPredicted RBP5.31□□□□□ -1.56
SSX2IP-203ENST00000437941 DSTQ03001 7570 aaKnown RBP5.3□□□□□ -1.56
SSX2IP-203ENST00000437941 KRTAP5-9P26371 169 aa5.29□□□□□ -1.56
SSX2IP-203ENST00000437941 NEBP20929 6669 aa5.28□□□□□ -1.56
SSX2IP-203ENST00000437941 MACF1Q9UPN3 7388 aaKnown RBP5.23□□□□□ -1.57
SSX2IP-203ENST00000437941 KRTAP4-6Q9BYQ5 205 aa5.09□□□□□ -1.59
SSX2IP-203ENST00000437941 KMT2DO14686 5537 aa5.08□□□□□ -1.6
SSX2IP-203ENST00000437941 KRTAP20-2Q3LI61 65 aa5.05□□□□□ -1.6
SSX2IP-203ENST00000437941 SSPOA2VEC9 5147 aa5.03□□□□□ -1.6
SSX2IP-203ENST00000437941 GPR98Q8WXG9 6306 aa4.89□□□□□ -1.63
SSX2IP-203ENST00000437941 MDN1Q9NU22 5596 aa4.86□□□□□ -1.63
SSX2IP-203ENST00000437941 KRTAP4-11Q9BYQ6 195 aa4.78□□□□□ -1.64
SSX2IP-203ENST00000437941 MUC19Q7Z5P9 8384 aa4.77□□□□□ -1.65
SSX2IP-203ENST00000437941 KRTAP5-4Q6L8H1 288 aa4.72□□□□□ -1.65
SSX2IP-203ENST00000437941 MUC12Q9UKN1 5478 aa4.65□□□□□ -1.67
SSX2IP-203ENST00000437941 KRTAP4-12Q9BQ66 201 aa4.59□□□□□ -1.68
SSX2IP-203ENST00000437941 KRTAP4-2Q9BYR5 136 aa4.59□□□□□ -1.68
SSX2IP-203ENST00000437941 KRTAP4-4Q9BYR3 166 aa4.55□□□□□ -1.68
SSX2IP-203ENST00000437941 KRTAP5-5Q701N2 237 aaPredicted RBP4.27□□□□□ -1.73
SSX2IP-203ENST00000437941 KRTAP5-3Q6L8H2 238 aa4.18□□□□□ -1.74
SSX2IP-203ENST00000437941 MUC5ACP98088 5654 aa4.02□□□□□ -1.77
SSX2IP-203ENST00000437941 AHNAK2Q8IVF2 5795 aa3.98□□□□□ -1.77
SSX2IP-203ENST00000437941 HMCN1Q96RW7 5635 aa3.84□□□□□ -1.79
SSX2IP-203ENST00000437941 KRTAP5-8O75690 187 aa3.8□□□□□ -1.8
SSX2IP-203ENST00000437941 PHGR1C9JFL3 82 aa3.56□□□□□ -1.84
SSX2IP-203ENST00000437941 KRTAP5-2Q701N4 177 aa3.53□□□□□ -1.84
SSX2IP-203ENST00000437941 KRTAP5-10Q6L8G5 202 aa3.48□□□□□ -1.85
SSX2IP-203ENST00000437941 MUC5BQ9HC84 5762 aaPredicted RBP3.39□□□□□ -1.87
SSX2IP-203ENST00000437941 AHNAKQ09666 5890 aaKnown RBP3.29□□□□□ -1.88
SSX2IP-203ENST00000437941 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
SSX2IP-203ENST00000437941 KRTAP5-1Q6L8H4 278 aa3.13□□□□□ -1.91
SSX2IP-203ENST00000437941 KRTAP21-2Q3LI59 83 aa2.98□□□□□ -1.93
SSX2IP-203ENST00000437941 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.78□□□□□ -1.96
SSX2IP-203ENST00000437941 KRTAP5-7Q6L8G8 165 aa2.75□□□□□ -1.97
SSX2IP-203ENST00000437941 KRTAP21-1Q3LI58 79 aa2.58□□□□□ -2
SSX2IP-203ENST00000437941 MUC16Q8WXI7 14507 aa2.05□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 12.1 ms