RNA–Protein interactions for RNA: ENST00000430710.7

CHD8-202, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD8, Length 7,420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-202ENST00000430710 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.05□□□□□ -2.08
CHD8-202ENST00000430710 KRTAP9-8Q9BYQ0 159 aa2.04□□□□□ -2.08
CHD8-202ENST00000430710 MT1LQ93083 61 aa2.02□□□□□ -2.09
CHD8-202ENST00000430710 LCE1BQ5T7P3 118 aa2.02□□□□□ -2.09
CHD8-202ENST00000430710 KRTAP9-3Q9BYQ3 159 aa2.02□□□□□ -2.09
CHD8-202ENST00000430710 KRTAP2-3P0C7H8 128 aa1.99□□□□□ -2.09
CHD8-202ENST00000430710 KRTAP2-4Q9BYR9 128 aa1.99□□□□□ -2.09
CHD8-202ENST00000430710 LCE1DQ5T752 114 aa1.99□□□□□ -2.09
CHD8-202ENST00000430710 SYNE2Q8WXH0 6885 aaKnown RBP1.98□□□□□ -2.09
CHD8-202ENST00000430710 UBR4Q5T4S7 5183 aa1.97□□□□□ -2.09
CHD8-202ENST00000430710 KRTAP4-7Q9BYR0 210 aa1.97□□□□□ -2.09
CHD8-202ENST00000430710 KRTAP19-2Q3LHN2 52 aa1.97□□□□□ -2.09
CHD8-202ENST00000430710 LCE5AQ5TCM9 118 aa1.96□□□□□ -2.1
CHD8-202ENST00000430710 KRTAP19-3Q7Z4W3 81 aa1.96□□□□□ -2.1
CHD8-202ENST00000430710 PRM1P04553 51 aa1.96□□□□□ -2.1
CHD8-202ENST00000430710 MT1EP04732 61 aa1.95□□□□□ -2.1
CHD8-202ENST00000430710 FSIP2Q5CZC0 6907 aa1.93□□□□□ -2.1
CHD8-202ENST00000430710 RNF213Q63HN8 5207 aa1.92□□□□□ -2.1
CHD8-202ENST00000430710 KRTAP2-1Q9BYU5 128 aa1.91□□□□□ -2.1
CHD8-202ENST00000430710 LCE1CQ5T751 118 aa1.89□□□□□ -2.11
CHD8-202ENST00000430710 LCE1EQ5T753 118 aa1.89□□□□□ -2.11
CHD8-202ENST00000430710 LCE1FQ5T754 118 aa1.89□□□□□ -2.11
CHD8-202ENST00000430710 LCE1AQ5T7P2 110 aa1.89□□□□□ -2.11
CHD8-202ENST00000430710 LCE4AQ5TA78 99 aa1.88□□□□□ -2.11
CHD8-202ENST00000430710 KRTAP2-2Q9BYT5 123 aa1.88□□□□□ -2.11
CHD8-202ENST00000430710 MT1MQ8N339 61 aa1.87□□□□□ -2.11
CHD8-202ENST00000430710 KRTAP6-3Q3LI67 103 aa1.87□□□□□ -2.11
CHD8-202ENST00000430710 LOC100996750A0A140TA64 210 aa1.86□□□□□ -2.11
CHD8-202ENST00000430710 KRTAP4-3Q9BYR4 195 aa1.86□□□□□ -2.11
CHD8-202ENST00000430710 HMCN2Q8NDA2 5059 aa1.85□□□□□ -2.11
CHD8-202ENST00000430710 MT1AP04731 61 aa1.84□□□□□ -2.11
CHD8-202ENST00000430710 FAT4Q6V0I7 4981 aa1.84□□□□□ -2.11
CHD8-202ENST00000430710 KRTAP19-7Q3SYF9 63 aa1.82□□□□□ -2.12
CHD8-202ENST00000430710 MUC12Q9UKN1 5478 aa1.8□□□□□ -2.12
CHD8-202ENST00000430710 OBSCNQ5VST9 7968 aa1.8□□□□□ -2.12
CHD8-202ENST00000430710 KRTAP9-9Q9BYP9 154 aa1.76□□□□□ -2.13
CHD8-202ENST00000430710 USH2AO75445 5202 aa1.74□□□□□ -2.13
CHD8-202ENST00000430710 KRTAP9-6A8MVA2 160 aa1.71□□□□□ -2.14
CHD8-202ENST00000430710 MUC2Q02817 5179 aa1.7□□□□□ -2.14
CHD8-202ENST00000430710 KRTAP6-2Q3LI66 62 aa1.69□□□□□ -2.14
CHD8-202ENST00000430710 KMT2DO14686 5537 aa1.64□□□□□ -2.15
CHD8-202ENST00000430710 KRTAP6-1Q3LI64 71 aa1.63□□□□□ -2.15
CHD8-202ENST00000430710 KRTAP9-4Q9BYQ2 154 aa1.63□□□□□ -2.15
CHD8-202ENST00000430710 MDN1Q9NU22 5596 aa1.61□□□□□ -2.15
CHD8-202ENST00000430710 KRTAP4-6Q9BYQ5 205 aa1.61□□□□□ -2.15
CHD8-202ENST00000430710 MUC19Q7Z5P9 8384 aa1.6□□□□□ -2.15
CHD8-202ENST00000430710 KRTAP4-12Q9BQ66 201 aa1.55□□□□□ -2.16
CHD8-202ENST00000430710 KRTAP4-2Q9BYR5 136 aa1.55□□□□□ -2.16
CHD8-202ENST00000430710 MACF1Q9UPN3 7388 aaKnown RBP1.54□□□□□ -2.16
CHD8-202ENST00000430710 NEBP20929 6669 aa1.52□□□□□ -2.17
CHD8-202ENST00000430710 SSPOA2VEC9 5147 aa1.52□□□□□ -2.17
CHD8-202ENST00000430710 FCGBPQ9Y6R7 5405 aaPredicted RBP1.52□□□□□ -2.17
CHD8-202ENST00000430710 GPR98Q8WXG9 6306 aa1.52□□□□□ -2.17
CHD8-202ENST00000430710 KRTAP20-2Q3LI61 65 aa1.51□□□□□ -2.17
CHD8-202ENST00000430710 DSTQ03001 7570 aaKnown RBP1.5□□□□□ -2.17
CHD8-202ENST00000430710 KRTAP4-11Q9BYQ6 195 aa1.47□□□□□ -2.17
CHD8-202ENST00000430710 KRTAP4-4Q9BYR3 166 aa1.44□□□□□ -2.18
CHD8-202ENST00000430710 KRTAP5-9P26371 169 aa1.39□□□□□ -2.19
CHD8-202ENST00000430710 AHNAK2Q8IVF2 5795 aa1.36□□□□□ -2.19
CHD8-202ENST00000430710 KRTAP5-5Q701N2 237 aaPredicted RBP1.34□□□□□ -2.2
CHD8-202ENST00000430710 PHGR1C9JFL3 82 aa1.3□□□□□ -2.2
CHD8-202ENST00000430710 KRTAP5-3Q6L8H2 238 aa1.28□□□□□ -2.2
CHD8-202ENST00000430710 KRTAP5-4Q6L8H1 288 aa1.27□□□□□ -2.21
CHD8-202ENST00000430710 HMCN1Q96RW7 5635 aa1.24□□□□□ -2.21
CHD8-202ENST00000430710 KRTAP5-8O75690 187 aa1.18□□□□□ -2.22
CHD8-202ENST00000430710 AHNAKQ09666 5890 aaKnown RBP1.11□□□□□ -2.23
CHD8-202ENST00000430710 MUC5ACP98088 5654 aa1.06□□□□□ -2.24
CHD8-202ENST00000430710 KRTAP5-10Q6L8G5 202 aa1.05□□□□□ -2.24
CHD8-202ENST00000430710 KRTAP5-2Q701N4 177 aa1.01□□□□□ -2.25
CHD8-202ENST00000430710 MUC5BQ9HC84 5762 aaPredicted RBP0.98□□□□□ -2.25
CHD8-202ENST00000430710 KRTAP5-11Q6L8G4 156 aa0.94□□□□□ -2.26
CHD8-202ENST00000430710 KRTAP5-7Q6L8G8 165 aa0.94□□□□□ -2.26
CHD8-202ENST00000430710 KRTAP21-1Q3LI58 79 aa0.92□□□□□ -2.26
CHD8-202ENST00000430710 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.9□□□□□ -2.27
CHD8-202ENST00000430710 KRTAP5-1Q6L8H4 278 aa0.87□□□□□ -2.27
CHD8-202ENST00000430710 KRTAP21-2Q3LI59 83 aa0.85□□□□□ -2.27
CHD8-202ENST00000430710 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 6.5 ms