RNA–Protein interactions for RNA: ENST00000430627.6

CDK12-201, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK12, Length 5,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-201ENST00000430627 KRTAP2-4Q9BYR9 128 aa4.27□□□□□ -1.73
CDK12-201ENST00000430627 LCE1CQ5T751 118 aa4.27□□□□□ -1.73
CDK12-201ENST00000430627 LCE1EQ5T753 118 aa4.27□□□□□ -1.73
CDK12-201ENST00000430627 LCE1FQ5T754 118 aa4.27□□□□□ -1.73
CDK12-201ENST00000430627 LCE1AQ5T7P2 110 aa4.27□□□□□ -1.73
CDK12-201ENST00000430627 KRTAP4-7Q9BYR0 210 aa4.27□□□□□ -1.73
CDK12-201ENST00000430627 KRTAP4-9Q9BYQ8 210 aa4.26□□□□□ -1.73
CDK12-201ENST00000430627 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.18□□□□□ -1.74
CDK12-201ENST00000430627 KRTAP6-3Q3LI67 103 aa4.17□□□□□ -1.74
CDK12-201ENST00000430627 MT1LQ93083 61 aa4.15□□□□□ -1.74
CDK12-201ENST00000430627 MT1EP04732 61 aa4.14□□□□□ -1.75
CDK12-201ENST00000430627 MT1MQ8N339 61 aa4.13□□□□□ -1.75
CDK12-201ENST00000430627 LCE2AQ5TA79 106 aaPredicted RBP4.13□□□□□ -1.75
CDK12-201ENST00000430627 LOC100996750A0A140TA64 210 aa4.13□□□□□ -1.75
CDK12-201ENST00000430627 KRTAP4-3Q9BYR4 195 aa4.1□□□□□ -1.75
CDK12-201ENST00000430627 SYNE2Q8WXH0 6885 aaKnown RBP4.08□□□□□ -1.76
CDK12-201ENST00000430627 EPPK1P58107 5090 aaKnown RBP4.05□□□□□ -1.76
CDK12-201ENST00000430627 KRTAP2-2Q9BYT5 123 aa4.05□□□□□ -1.76
CDK12-201ENST00000430627 KRTAP2-1Q9BYU5 128 aa4.05□□□□□ -1.76
CDK12-201ENST00000430627 FLGP20930 4061 aaPredicted RBP4.02□□□□□ -1.77
CDK12-201ENST00000430627 PRM1P04553 51 aa3.98□□□□□ -1.77
CDK12-201ENST00000430627 ABCA13Q86UQ4 5058 aa3.97□□□□□ -1.77
CDK12-201ENST00000430627 MUC2Q02817 5179 aa3.97□□□□□ -1.77
CDK12-201ENST00000430627 MUC17Q685J3 4493 aa3.95□□□□□ -1.78
CDK12-201ENST00000430627 KRTAP19-2Q3LHN2 52 aa3.94□□□□□ -1.78
CDK12-201ENST00000430627 FSIP2Q5CZC0 6907 aa3.9□□□□□ -1.78
CDK12-201ENST00000430627 LCE4AQ5TA78 99 aa3.9□□□□□ -1.79
CDK12-201ENST00000430627 KRTAP9-9Q9BYP9 154 aa3.86□□□□□ -1.79
CDK12-201ENST00000430627 HMCN2Q8NDA2 5059 aa3.82□□□□□ -1.8
CDK12-201ENST00000430627 FAT4Q6V0I7 4981 aa3.8□□□□□ -1.8
CDK12-201ENST00000430627 UBR4Q5T4S7 5183 aa3.79□□□□□ -1.8
CDK12-201ENST00000430627 MT1AP04731 61 aa3.79□□□□□ -1.8
CDK12-201ENST00000430627 KRTAP6-2Q3LI66 62 aa3.75□□□□□ -1.81
CDK12-201ENST00000430627 RNF213Q63HN8 5207 aa3.69□□□□□ -1.82
CDK12-201ENST00000430627 KMT2DO14686 5537 aa3.65□□□□□ -1.83
CDK12-201ENST00000430627 KRTAP9-6A8MVA2 160 aa3.59□□□□□ -1.84
CDK12-201ENST00000430627 KRTAP9-4Q9BYQ2 154 aa3.57□□□□□ -1.84
CDK12-201ENST00000430627 KRTAP19-7Q3SYF9 63 aa3.55□□□□□ -1.84
CDK12-201ENST00000430627 KRTAP6-1Q3LI64 71 aa3.55□□□□□ -1.84
CDK12-201ENST00000430627 USH2AO75445 5202 aa3.41□□□□□ -1.86
CDK12-201ENST00000430627 KRTAP20-2Q3LI61 65 aa3.39□□□□□ -1.87
CDK12-201ENST00000430627 FCGBPQ9Y6R7 5405 aaPredicted RBP3.38□□□□□ -1.87
CDK12-201ENST00000430627 NEBP20929 6669 aa3.38□□□□□ -1.87
CDK12-201ENST00000430627 SYNE1Q8NF91 8797 aaKnown RBP3.36□□□□□ -1.87
CDK12-201ENST00000430627 DSTQ03001 7570 aaKnown RBP3.31□□□□□ -1.88
CDK12-201ENST00000430627 KRTAP4-6Q9BYQ5 205 aa3.29□□□□□ -1.88
CDK12-201ENST00000430627 KRTAP4-12Q9BQ66 201 aa3.27□□□□□ -1.89
CDK12-201ENST00000430627 KRTAP4-2Q9BYR5 136 aa3.27□□□□□ -1.89
CDK12-201ENST00000430627 OBSCNQ5VST9 7968 aa3.24□□□□□ -1.89
CDK12-201ENST00000430627 KRTAP5-9P26371 169 aa3.21□□□□□ -1.9
CDK12-201ENST00000430627 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
CDK12-201ENST00000430627 SSPOA2VEC9 5147 aa3.14□□□□□ -1.91
CDK12-201ENST00000430627 GPR98Q8WXG9 6306 aa3.07□□□□□ -1.92
CDK12-201ENST00000430627 MUC12Q9UKN1 5478 aa3.07□□□□□ -1.92
CDK12-201ENST00000430627 MACF1Q9UPN3 7388 aaKnown RBP3.04□□□□□ -1.92
CDK12-201ENST00000430627 KRTAP4-11Q9BYQ6 195 aa2.98□□□□□ -1.93
CDK12-201ENST00000430627 KRTAP5-4Q6L8H1 288 aa2.92□□□□□ -1.94
CDK12-201ENST00000430627 KRTAP5-3Q6L8H2 238 aa2.73□□□□□ -1.97
CDK12-201ENST00000430627 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
CDK12-201ENST00000430627 KRTAP5-5Q701N2 237 aaPredicted RBP2.69□□□□□ -1.98
CDK12-201ENST00000430627 MDN1Q9NU22 5596 aa2.66□□□□□ -1.98
CDK12-201ENST00000430627 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
CDK12-201ENST00000430627 AHNAK2Q8IVF2 5795 aa2.44□□□□□ -2.02
CDK12-201ENST00000430627 KRTAP5-8O75690 187 aa2.43□□□□□ -2.02
CDK12-201ENST00000430627 HMCN1Q96RW7 5635 aa2.35□□□□□ -2.03
CDK12-201ENST00000430627 MUC5ACP98088 5654 aa2.33□□□□□ -2.04
CDK12-201ENST00000430627 KRTAP5-7Q6L8G8 165 aa2.08□□□□□ -2.08
CDK12-201ENST00000430627 KRTAP5-10Q6L8G5 202 aa2.05□□□□□ -2.08
CDK12-201ENST00000430627 AHNAKQ09666 5890 aaKnown RBP2.02□□□□□ -2.09
CDK12-201ENST00000430627 MUC5BQ9HC84 5762 aaPredicted RBP2.01□□□□□ -2.09
CDK12-201ENST00000430627 KRTAP5-2Q701N4 177 aa1.96□□□□□ -2.1
CDK12-201ENST00000430627 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
CDK12-201ENST00000430627 KRTAP5-1Q6L8H4 278 aa1.78□□□□□ -2.12
CDK12-201ENST00000430627 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.13
CDK12-201ENST00000430627 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
CDK12-201ENST00000430627 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.5□□□□□ -2.17
CDK12-201ENST00000430627 MUC16Q8WXI7 14507 aa1.31□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 99.4 ms