RNA–Protein interactions for RNA: ENST00000430321.5

UBR3-204, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,411 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-204ENST00000430321 PKHD1P08F94 4074 aa1.77□□□□□ -2.13
UBR3-204ENST00000430321 SPEGQ15772 3267 aa1.77□□□□□ -2.13
UBR3-204ENST00000430321 KRTAP4-9Q9BYQ8 210 aa1.77□□□□□ -2.13
UBR3-204ENST00000430321 DNAH14Q0VDD8 3507 aa1.76□□□□□ -2.13
UBR3-204ENST00000430321 RELNP78509 3460 aa1.76□□□□□ -2.13
UBR3-204ENST00000430321 ZNF469Q96JG9 3925 aaPredicted RBP1.75□□□□□ -2.13
UBR3-204ENST00000430321 VCANP13611 3396 aa1.75□□□□□ -2.13
UBR3-204ENST00000430321 LCE1DQ5T752 114 aa1.73□□□□□ -2.13
UBR3-204ENST00000430321 LCE5AQ5TCM9 118 aa1.73□□□□□ -2.13
UBR3-204ENST00000430321 HMCN2Q8NDA2 5059 aa1.73□□□□□ -2.13
UBR3-204ENST00000430321 LCE1BQ5T7P3 118 aa1.72□□□□□ -2.13
UBR3-204ENST00000430321 MUC3AQ02505 3323 aa1.72□□□□□ -2.13
UBR3-204ENST00000430321 VPS13CQ709C8 3753 aa1.71□□□□□ -2.14
UBR3-204ENST00000430321 SMG1Q96Q15 3661 aaKnown RBP1.7□□□□□ -2.14
UBR3-204ENST00000430321 CELSR3Q9NYQ7 3312 aa1.69□□□□□ -2.14
UBR3-204ENST00000430321 LOC400499M0QZD8 3231 aa1.68□□□□□ -2.14
UBR3-204ENST00000430321 KRTAP19-7Q3SYF9 63 aa1.68□□□□□ -2.14
UBR3-204ENST00000430321 FLGP20930 4061 aaPredicted RBP1.67□□□□□ -2.14
UBR3-204ENST00000430321 KIAA1109Q2LD37 5005 aa1.66□□□□□ -2.14
UBR3-204ENST00000430321 ASPMQ8IZT6 3477 aa1.66□□□□□ -2.14
UBR3-204ENST00000430321 LPAP08519 4548 aa1.64□□□□□ -2.15
UBR3-204ENST00000430321 DCHS1Q96JQ0 3298 aa1.64□□□□□ -2.15
UBR3-204ENST00000430321 LYSTQ99698 3801 aa1.61□□□□□ -2.15
UBR3-204ENST00000430321 LAMA5O15230 3695 aa1.61□□□□□ -2.15
UBR3-204ENST00000430321 ABCA13Q86UQ4 5058 aa1.61□□□□□ -2.15
UBR3-204ENST00000430321 KRTAP5-9P26371 169 aa1.61□□□□□ -2.15
UBR3-204ENST00000430321 PRM1P04553 51 aa1.6□□□□□ -2.15
UBR3-204ENST00000430321 EPPK1P58107 5090 aaKnown RBP1.6□□□□□ -2.15
UBR3-204ENST00000430321 KRTAP4-11Q9BYQ6 195 aa1.59□□□□□ -2.15
UBR3-204ENST00000430321 SVEP1Q4LDE5 3571 aa1.58□□□□□ -2.16
UBR3-204ENST00000430321 LCE1CQ5T751 118 aa1.56□□□□□ -2.16
UBR3-204ENST00000430321 LCE1EQ5T753 118 aa1.56□□□□□ -2.16
UBR3-204ENST00000430321 LCE1FQ5T754 118 aa1.56□□□□□ -2.16
UBR3-204ENST00000430321 KRTAP6-2Q3LI66 62 aa1.56□□□□□ -2.16
UBR3-204ENST00000430321 FAT4Q6V0I7 4981 aa1.56□□□□□ -2.16
UBR3-204ENST00000430321 CSMD2Q7Z408 3487 aa1.55□□□□□ -2.16
UBR3-204ENST00000430321 KRTAP4-3Q9BYR4 195 aa1.54□□□□□ -2.16
UBR3-204ENST00000430321 RNF213Q63HN8 5207 aa1.54□□□□□ -2.16
UBR3-204ENST00000430321 CSMD3Q7Z407 3707 aa1.54□□□□□ -2.16
UBR3-204ENST00000430321 SYNE2Q8WXH0 6885 aaKnown RBP1.54□□□□□ -2.16
UBR3-204ENST00000430321 HYDINQ4G0P3 5121 aa1.54□□□□□ -2.16
UBR3-204ENST00000430321 NEBP20929 6669 aa1.53□□□□□ -2.17
UBR3-204ENST00000430321 KRTAP6-1Q3LI64 71 aa1.53□□□□□ -2.17
UBR3-204ENST00000430321 CSMD1Q96PZ7 3565 aa1.5□□□□□ -2.17
UBR3-204ENST00000430321 UBR4Q5T4S7 5183 aa1.49□□□□□ -2.17
UBR3-204ENST00000430321 KRTAP5-4Q6L8H1 288 aa1.47□□□□□ -2.17
UBR3-204ENST00000430321 KRTAP20-2Q3LI61 65 aa1.42□□□□□ -2.18
UBR3-204ENST00000430321 SSPOA2VEC9 5147 aa1.39□□□□□ -2.19
UBR3-204ENST00000430321 FSIP2Q5CZC0 6907 aa1.39□□□□□ -2.19
UBR3-204ENST00000430321 GPR98Q8WXG9 6306 aa1.34□□□□□ -2.2
UBR3-204ENST00000430321 KRTAP4-4Q9BYR3 166 aa1.31□□□□□ -2.2
UBR3-204ENST00000430321 OBSCNQ5VST9 7968 aa1.3□□□□□ -2.2
UBR3-204ENST00000430321 KRTAP9-6A8MVA2 160 aa1.29□□□□□ -2.2
UBR3-204ENST00000430321 KRTAP5-8O75690 187 aa1.27□□□□□ -2.21
UBR3-204ENST00000430321 KRTAP5-11Q6L8G4 156 aa1.27□□□□□ -2.21
UBR3-204ENST00000430321 KMT2DO14686 5537 aa1.24□□□□□ -2.21
UBR3-204ENST00000430321 USH2AO75445 5202 aa1.23□□□□□ -2.21
UBR3-204ENST00000430321 SYNE1Q8NF91 8797 aaKnown RBP1.21□□□□□ -2.22
UBR3-204ENST00000430321 MUC12Q9UKN1 5478 aa1.21□□□□□ -2.22
UBR3-204ENST00000430321 MUC5ACP98088 5654 aa1.18□□□□□ -2.22
UBR3-204ENST00000430321 AHNAK2Q8IVF2 5795 aa1.18□□□□□ -2.22
UBR3-204ENST00000430321 KRTAP5-5Q701N2 237 aaPredicted RBP1.18□□□□□ -2.22
UBR3-204ENST00000430321 HMCN1Q96RW7 5635 aa1.17□□□□□ -2.22
UBR3-204ENST00000430321 MUC2Q02817 5179 aa1.16□□□□□ -2.22
UBR3-204ENST00000430321 KRTAP5-1Q6L8H4 278 aa1.14□□□□□ -2.23
UBR3-204ENST00000430321 FCGBPQ9Y6R7 5405 aaPredicted RBP1.11□□□□□ -2.23
UBR3-204ENST00000430321 MDN1Q9NU22 5596 aa1.1□□□□□ -2.23
UBR3-204ENST00000430321 MACF1Q9UPN3 7388 aaKnown RBP1.05□□□□□ -2.24
UBR3-204ENST00000430321 MUC5BQ9HC84 5762 aaPredicted RBP1.04□□□□□ -2.24
UBR3-204ENST00000430321 AHNAKQ09666 5890 aaKnown RBP1.04□□□□□ -2.24
UBR3-204ENST00000430321 PHGR1C9JFL3 82 aa1.03□□□□□ -2.24
UBR3-204ENST00000430321 KRTAP5-7Q6L8G8 165 aa1□□□□□ -2.25
UBR3-204ENST00000430321 DSTQ03001 7570 aaKnown RBP0.95□□□□□ -2.26
UBR3-204ENST00000430321 MUC19Q7Z5P9 8384 aa0.92□□□□□ -2.26
UBR3-204ENST00000430321 KRTAP5-10Q6L8G5 202 aa0.9□□□□□ -2.27
UBR3-204ENST00000430321 KRTAP21-2Q3LI59 83 aa0.89□□□□□ -2.27
UBR3-204ENST00000430321 KRTAP21-1Q3LI58 79 aa0.87□□□□□ -2.27
UBR3-204ENST00000430321 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 146.5 ms