RNA–Protein interactions for RNA: ENST00000428457.1

TNS3-204, Transcript of tensin 3, humanhuman

TSL 1 (best)

Gene TNS3, Length 5,070 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNS3-204ENST00000428457 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.35□□□□□ -1.87
TNS3-204ENST00000428457 FLGP20930 4061 aaPredicted RBP3.35□□□□□ -1.87
TNS3-204ENST00000428457 KRTAP19-3Q7Z4W3 81 aa3.34□□□□□ -1.87
TNS3-204ENST00000428457 RNF213Q63HN8 5207 aa3.34□□□□□ -1.88
TNS3-204ENST00000428457 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
TNS3-204ENST00000428457 FSIP2Q5CZC0 6907 aa3.26□□□□□ -1.89
TNS3-204ENST00000428457 OBSCNQ5VST9 7968 aa3.26□□□□□ -1.89
TNS3-204ENST00000428457 KRTAP20-1Q3LI63 56 aa3.26□□□□□ -1.89
TNS3-204ENST00000428457 SSPOA2VEC9 5147 aa3.25□□□□□ -1.89
TNS3-204ENST00000428457 LCE3EQ5T5B0 92 aa3.23□□□□□ -1.89
TNS3-204ENST00000428457 MUC2Q02817 5179 aa3.22□□□□□ -1.89
TNS3-204ENST00000428457 MT1LQ93083 61 aa3.22□□□□□ -1.89
TNS3-204ENST00000428457 SYNE1Q8NF91 8797 aaKnown RBP3.22□□□□□ -1.89
TNS3-204ENST00000428457 MT1EP04732 61 aa3.21□□□□□ -1.9
TNS3-204ENST00000428457 KRTAP6-3Q3LI67 103 aa3.16□□□□□ -1.9
TNS3-204ENST00000428457 LOC100996750A0A140TA64 210 aa3.14□□□□□ -1.91
TNS3-204ENST00000428457 MT1MQ8N339 61 aa3.13□□□□□ -1.91
TNS3-204ENST00000428457 MT3P25713 68 aa3.13□□□□□ -1.91
TNS3-204ENST00000428457 PRM1P04553 51 aa3.12□□□□□ -1.91
TNS3-204ENST00000428457 MT4P47944 62 aa3.11□□□□□ -1.91
TNS3-204ENST00000428457 LCE1AQ5T7P2 110 aa3.1□□□□□ -1.91
TNS3-204ENST00000428457 KRTAP2-3P0C7H8 128 aa3.09□□□□□ -1.91
TNS3-204ENST00000428457 KRTAP2-4Q9BYR9 128 aa3.09□□□□□ -1.91
TNS3-204ENST00000428457 KRTAP4-3Q9BYR4 195 aa3.09□□□□□ -1.92
TNS3-204ENST00000428457 GPR98Q8WXG9 6306 aa3.06□□□□□ -1.92
TNS3-204ENST00000428457 DSTQ03001 7570 aaKnown RBP3.03□□□□□ -1.92
TNS3-204ENST00000428457 KRTAP19-7Q3SYF9 63 aa3.01□□□□□ -1.93
TNS3-204ENST00000428457 KRTAP4-9Q9BYQ8 210 aa3□□□□□ -1.93
TNS3-204ENST00000428457 KRTAP2-1Q9BYU5 128 aa3□□□□□ -1.93
TNS3-204ENST00000428457 NEBP20929 6669 aa2.97□□□□□ -1.93
TNS3-204ENST00000428457 LCE4AQ5TA78 99 aa2.96□□□□□ -1.93
TNS3-204ENST00000428457 KRTAP2-2Q9BYT5 123 aa2.96□□□□□ -1.93
TNS3-204ENST00000428457 MT1AP04731 61 aa2.95□□□□□ -1.94
TNS3-204ENST00000428457 KRTAP9-6A8MVA2 160 aa2.95□□□□□ -1.94
TNS3-204ENST00000428457 SYNE2Q8WXH0 6885 aaKnown RBP2.89□□□□□ -1.95
TNS3-204ENST00000428457 LCE1DQ5T752 114 aa2.87□□□□□ -1.95
TNS3-204ENST00000428457 USH2AO75445 5202 aa2.87□□□□□ -1.95
TNS3-204ENST00000428457 LCE1BQ5T7P3 118 aa2.86□□□□□ -1.95
TNS3-204ENST00000428457 FCGBPQ9Y6R7 5405 aaPredicted RBP2.82□□□□□ -1.96
TNS3-204ENST00000428457 KRTAP5-9P26371 169 aa2.78□□□□□ -1.96
TNS3-204ENST00000428457 LCE5AQ5TCM9 118 aa2.78□□□□□ -1.97
TNS3-204ENST00000428457 KRTAP6-2Q3LI66 62 aa2.74□□□□□ -1.97
TNS3-204ENST00000428457 KMT2DO14686 5537 aa2.74□□□□□ -1.97
TNS3-204ENST00000428457 KRTAP6-1Q3LI64 71 aa2.72□□□□□ -1.97
TNS3-204ENST00000428457 MUC5BQ9HC84 5762 aaPredicted RBP2.71□□□□□ -1.98
TNS3-204ENST00000428457 KRTAP9-4Q9BYQ2 154 aa2.71□□□□□ -1.98
TNS3-204ENST00000428457 AHNAKQ09666 5890 aaKnown RBP2.68□□□□□ -1.98
TNS3-204ENST00000428457 KRTAP5-7Q6L8G8 165 aa2.67□□□□□ -1.98
TNS3-204ENST00000428457 MACF1Q9UPN3 7388 aaKnown RBP2.6□□□□□ -1.99
TNS3-204ENST00000428457 MUC12Q9UKN1 5478 aa2.57□□□□□ -2
TNS3-204ENST00000428457 KRTAP9-9Q9BYP9 154 aa2.57□□□□□ -2
TNS3-204ENST00000428457 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
TNS3-204ENST00000428457 LCE1EQ5T753 118 aa2.51□□□□□ -2.01
TNS3-204ENST00000428457 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
TNS3-204ENST00000428457 KRTAP5-10Q6L8G5 202 aa2.45□□□□□ -2.02
TNS3-204ENST00000428457 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
TNS3-204ENST00000428457 AHNAK2Q8IVF2 5795 aa2.41□□□□□ -2.02
TNS3-204ENST00000428457 HMCN1Q96RW7 5635 aa2.39□□□□□ -2.03
TNS3-204ENST00000428457 KRTAP20-2Q3LI61 65 aa2.36□□□□□ -2.03
TNS3-204ENST00000428457 MDN1Q9NU22 5596 aa2.33□□□□□ -2.04
TNS3-204ENST00000428457 KRTAP4-11Q9BYQ6 195 aa2.33□□□□□ -2.04
TNS3-204ENST00000428457 KRTAP5-4Q6L8H1 288 aa2.31□□□□□ -2.04
TNS3-204ENST00000428457 KRTAP4-6Q9BYQ5 205 aa2.3□□□□□ -2.04
TNS3-204ENST00000428457 KRTAP5-5Q701N2 237 aaPredicted RBP2.23□□□□□ -2.05
TNS3-204ENST00000428457 KRTAP5-3Q6L8H2 238 aa2.19□□□□□ -2.06
TNS3-204ENST00000428457 MUC5ACP98088 5654 aa2.1□□□□□ -2.07
TNS3-204ENST00000428457 KRTAP4-4Q9BYR3 166 aa2.06□□□□□ -2.08
TNS3-204ENST00000428457 KRTAP5-2Q701N4 177 aa1.99□□□□□ -2.09
TNS3-204ENST00000428457 KRTAP4-12Q9BQ66 201 aa1.95□□□□□ -2.1
TNS3-204ENST00000428457 KRTAP4-2Q9BYR5 136 aa1.95□□□□□ -2.1
TNS3-204ENST00000428457 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
TNS3-204ENST00000428457 KRTAP5-1Q6L8H4 278 aa1.79□□□□□ -2.12
TNS3-204ENST00000428457 PHGR1C9JFL3 82 aa1.66□□□□□ -2.14
TNS3-204ENST00000428457 KRTAP5-11Q6L8G4 156 aa1.61□□□□□ -2.15
TNS3-204ENST00000428457 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.51□□□□□ -2.17
TNS3-204ENST00000428457 KRTAP21-2Q3LI59 83 aa1.45□□□□□ -2.18
TNS3-204ENST00000428457 KRTAP21-1Q3LI58 79 aa1.39□□□□□ -2.19
TNS3-204ENST00000428457 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms