RNA–Protein interactions for RNA: ENST00000426548.5

GJC1-202, Transcript of gap junction protein gamma 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene GJC1, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJC1-202ENST00000426548 KRTAP2-4Q9BYR9 128 aa2.37□□□□□ -2.03
GJC1-202ENST00000426548 KRTAP6-3Q3LI67 103 aa2.37□□□□□ -2.03
GJC1-202ENST00000426548 EPPK1P58107 5090 aaKnown RBP2.36□□□□□ -2.03
GJC1-202ENST00000426548 MT1MQ8N339 61 aa2.36□□□□□ -2.03
GJC1-202ENST00000426548 MT3P25713 68 aa2.35□□□□□ -2.03
GJC1-202ENST00000426548 HMCN2Q8NDA2 5059 aa2.34□□□□□ -2.03
GJC1-202ENST00000426548 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.34□□□□□ -2.03
GJC1-202ENST00000426548 LRP2P98164 4655 aa2.34□□□□□ -2.03
GJC1-202ENST00000426548 KRTAP4-7Q9BYR0 210 aa2.33□□□□□ -2.04
GJC1-202ENST00000426548 LCE3EQ5T5B0 92 aa2.32□□□□□ -2.04
GJC1-202ENST00000426548 UBR4Q5T4S7 5183 aa2.32□□□□□ -2.04
GJC1-202ENST00000426548 LCE1BQ5T7P3 118 aa2.32□□□□□ -2.04
GJC1-202ENST00000426548 LCE1DQ5T752 114 aa2.31□□□□□ -2.04
GJC1-202ENST00000426548 FLGP20930 4061 aaPredicted RBP2.27□□□□□ -2.05
GJC1-202ENST00000426548 KRTAP2-2Q9BYT5 123 aa2.26□□□□□ -2.05
GJC1-202ENST00000426548 KRTAP2-1Q9BYU5 128 aa2.26□□□□□ -2.05
GJC1-202ENST00000426548 KRTAP4-3Q9BYR4 195 aa2.25□□□□□ -2.05
GJC1-202ENST00000426548 LOC100996750A0A140TA64 210 aa2.25□□□□□ -2.05
GJC1-202ENST00000426548 LCE5AQ5TCM9 118 aa2.25□□□□□ -2.05
GJC1-202ENST00000426548 LCE4AQ5TA78 99 aa2.23□□□□□ -2.05
GJC1-202ENST00000426548 LCE1AQ5T7P2 110 aa2.22□□□□□ -2.05
GJC1-202ENST00000426548 KRTAP4-9Q9BYQ8 210 aa2.22□□□□□ -2.05
GJC1-202ENST00000426548 RNF213Q63HN8 5207 aa2.19□□□□□ -2.06
GJC1-202ENST00000426548 MT1AP04731 61 aa2.18□□□□□ -2.06
GJC1-202ENST00000426548 KRTAP19-7Q3SYF9 63 aa2.12□□□□□ -2.07
GJC1-202ENST00000426548 PRM1P04553 51 aa2.08□□□□□ -2.08
GJC1-202ENST00000426548 FAT4Q6V0I7 4981 aa2.07□□□□□ -2.08
GJC1-202ENST00000426548 LCE1CQ5T751 118 aa2.07□□□□□ -2.08
GJC1-202ENST00000426548 LCE1EQ5T753 118 aa2.07□□□□□ -2.08
GJC1-202ENST00000426548 LCE1FQ5T754 118 aa2.07□□□□□ -2.08
GJC1-202ENST00000426548 KRTAP9-4Q9BYQ2 154 aa2.06□□□□□ -2.08
GJC1-202ENST00000426548 KRTAP6-2Q3LI66 62 aa2.05□□□□□ -2.08
GJC1-202ENST00000426548 SYNE2Q8WXH0 6885 aaKnown RBP2.04□□□□□ -2.08
GJC1-202ENST00000426548 KRTAP9-9Q9BYP9 154 aa2.02□□□□□ -2.09
GJC1-202ENST00000426548 KRTAP6-1Q3LI64 71 aa2.01□□□□□ -2.09
GJC1-202ENST00000426548 USH2AO75445 5202 aa1.98□□□□□ -2.09
GJC1-202ENST00000426548 MUC2Q02817 5179 aa1.97□□□□□ -2.09
GJC1-202ENST00000426548 SSPOA2VEC9 5147 aa1.94□□□□□ -2.1
GJC1-202ENST00000426548 FSIP2Q5CZC0 6907 aa1.89□□□□□ -2.11
GJC1-202ENST00000426548 KRTAP5-9P26371 169 aa1.87□□□□□ -2.11
GJC1-202ENST00000426548 KRTAP4-6Q9BYQ5 205 aa1.79□□□□□ -2.12
GJC1-202ENST00000426548 NEBP20929 6669 aa1.79□□□□□ -2.12
GJC1-202ENST00000426548 KRTAP20-2Q3LI61 65 aa1.78□□□□□ -2.12
GJC1-202ENST00000426548 KRTAP9-6A8MVA2 160 aa1.76□□□□□ -2.13
GJC1-202ENST00000426548 KRTAP5-4Q6L8H1 288 aa1.73□□□□□ -2.13
GJC1-202ENST00000426548 GPR98Q8WXG9 6306 aa1.68□□□□□ -2.14
GJC1-202ENST00000426548 KMT2DO14686 5537 aa1.66□□□□□ -2.14
GJC1-202ENST00000426548 MDN1Q9NU22 5596 aa1.65□□□□□ -2.14
GJC1-202ENST00000426548 MACF1Q9UPN3 7388 aaKnown RBP1.65□□□□□ -2.15
GJC1-202ENST00000426548 KRTAP4-12Q9BQ66 201 aa1.64□□□□□ -2.15
GJC1-202ENST00000426548 KRTAP4-2Q9BYR5 136 aa1.64□□□□□ -2.15
GJC1-202ENST00000426548 KRTAP4-11Q9BYQ6 195 aa1.62□□□□□ -2.15
GJC1-202ENST00000426548 OBSCNQ5VST9 7968 aa1.59□□□□□ -2.16
GJC1-202ENST00000426548 MUC12Q9UKN1 5478 aa1.57□□□□□ -2.16
GJC1-202ENST00000426548 KRTAP4-4Q9BYR3 166 aa1.57□□□□□ -2.16
GJC1-202ENST00000426548 FCGBPQ9Y6R7 5405 aaPredicted RBP1.54□□□□□ -2.16
GJC1-202ENST00000426548 KRTAP5-3Q6L8H2 238 aa1.52□□□□□ -2.17
GJC1-202ENST00000426548 SYNE1Q8NF91 8797 aaKnown RBP1.48□□□□□ -2.17
GJC1-202ENST00000426548 KRTAP5-5Q701N2 237 aaPredicted RBP1.43□□□□□ -2.18
GJC1-202ENST00000426548 DSTQ03001 7570 aaKnown RBP1.43□□□□□ -2.18
GJC1-202ENST00000426548 AHNAK2Q8IVF2 5795 aa1.42□□□□□ -2.18
GJC1-202ENST00000426548 HMCN1Q96RW7 5635 aa1.41□□□□□ -2.18
GJC1-202ENST00000426548 AHNAKQ09666 5890 aaKnown RBP1.41□□□□□ -2.18
GJC1-202ENST00000426548 MUC5BQ9HC84 5762 aaPredicted RBP1.39□□□□□ -2.19
GJC1-202ENST00000426548 KRTAP5-8O75690 187 aa1.38□□□□□ -2.19
GJC1-202ENST00000426548 PHGR1C9JFL3 82 aa1.36□□□□□ -2.19
GJC1-202ENST00000426548 KRTAP5-2Q701N4 177 aa1.31□□□□□ -2.2
GJC1-202ENST00000426548 MUC19Q7Z5P9 8384 aa1.3□□□□□ -2.2
GJC1-202ENST00000426548 MUC5ACP98088 5654 aa1.28□□□□□ -2.2
GJC1-202ENST00000426548 KRTAP5-10Q6L8G5 202 aa1.13□□□□□ -2.23
GJC1-202ENST00000426548 KRTAP5-7Q6L8G8 165 aa1.13□□□□□ -2.23
GJC1-202ENST00000426548 KRTAP5-11Q6L8G4 156 aa1.1□□□□□ -2.23
GJC1-202ENST00000426548 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.07□□□□□ -2.24
GJC1-202ENST00000426548 KRTAP5-1Q6L8H4 278 aa1.07□□□□□ -2.24
GJC1-202ENST00000426548 KRTAP21-2Q3LI59 83 aa0.98□□□□□ -2.25
GJC1-202ENST00000426548 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
GJC1-202ENST00000426548 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 85.9 ms