RNA–Protein interactions for RNA: ENST00000424408.6

LAMA4-207, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LAMA4, Length 5,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-207ENST00000424408 KRTAP19-6Q3LI70 58 aa3.61□□□□□ -1.83
LAMA4-207ENST00000424408 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
LAMA4-207ENST00000424408 KRTAP4-3Q9BYR4 195 aa3.61□□□□□ -1.83
LAMA4-207ENST00000424408 MT4P47944 62 aa3.6□□□□□ -1.83
LAMA4-207ENST00000424408 KRTAP19-2Q3LHN2 52 aa3.59□□□□□ -1.84
LAMA4-207ENST00000424408 LCE1DQ5T752 114 aa3.57□□□□□ -1.84
LAMA4-207ENST00000424408 PKHD1P08F94 4074 aa3.55□□□□□ -1.84
LAMA4-207ENST00000424408 KRTAP9-7A8MTY7 169 aa3.54□□□□□ -1.84
LAMA4-207ENST00000424408 KRTAP4-9Q9BYQ8 210 aa3.53□□□□□ -1.84
LAMA4-207ENST00000424408 TNXBP22105 4242 aa3.52□□□□□ -1.85
LAMA4-207ENST00000424408 UBR4Q5T4S7 5183 aa3.51□□□□□ -1.85
LAMA4-207ENST00000424408 KRTAP6-3Q3LI67 103 aa3.48□□□□□ -1.85
LAMA4-207ENST00000424408 KRTAP2-3P0C7H8 128 aa3.47□□□□□ -1.85
LAMA4-207ENST00000424408 KRTAP2-4Q9BYR9 128 aa3.47□□□□□ -1.85
LAMA4-207ENST00000424408 KRTAP2-1Q9BYU5 128 aa3.47□□□□□ -1.85
LAMA4-207ENST00000424408 RNF213Q63HN8 5207 aa3.47□□□□□ -1.85
LAMA4-207ENST00000424408 FLGP20930 4061 aaPredicted RBP3.46□□□□□ -1.86
LAMA4-207ENST00000424408 KRTAP20-1Q3LI63 56 aa3.45□□□□□ -1.86
LAMA4-207ENST00000424408 MT1AP04731 61 aa3.42□□□□□ -1.86
LAMA4-207ENST00000424408 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.39□□□□□ -1.87
LAMA4-207ENST00000424408 KRTAP19-7Q3SYF9 63 aa3.36□□□□□ -1.87
LAMA4-207ENST00000424408 FSIP2Q5CZC0 6907 aa3.36□□□□□ -1.87
LAMA4-207ENST00000424408 KRTAP6-2Q3LI66 62 aa3.35□□□□□ -1.87
LAMA4-207ENST00000424408 HMCN2Q8NDA2 5059 aa3.35□□□□□ -1.87
LAMA4-207ENST00000424408 LCE5AQ5TCM9 118 aa3.35□□□□□ -1.87
LAMA4-207ENST00000424408 LCE1AQ5T7P2 110 aa3.33□□□□□ -1.88
LAMA4-207ENST00000424408 FAT4Q6V0I7 4981 aa3.31□□□□□ -1.88
LAMA4-207ENST00000424408 KRTAP6-1Q3LI64 71 aa3.23□□□□□ -1.89
LAMA4-207ENST00000424408 KRTAP2-2Q9BYT5 123 aa3.23□□□□□ -1.89
LAMA4-207ENST00000424408 SYNE2Q8WXH0 6885 aaKnown RBP3.22□□□□□ -1.89
LAMA4-207ENST00000424408 SYNE1Q8NF91 8797 aaKnown RBP3.22□□□□□ -1.89
LAMA4-207ENST00000424408 KRTAP9-6A8MVA2 160 aa3.21□□□□□ -1.9
LAMA4-207ENST00000424408 KRTAP9-4Q9BYQ2 154 aa3.18□□□□□ -1.9
LAMA4-207ENST00000424408 LCE4AQ5TA78 99 aa3.12□□□□□ -1.91
LAMA4-207ENST00000424408 LCE1CQ5T751 118 aa3.09□□□□□ -1.91
LAMA4-207ENST00000424408 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
LAMA4-207ENST00000424408 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
LAMA4-207ENST00000424408 MUC2Q02817 5179 aa3.05□□□□□ -1.92
LAMA4-207ENST00000424408 OBSCNQ5VST9 7968 aa2.96□□□□□ -1.93
LAMA4-207ENST00000424408 KRTAP5-9P26371 169 aa2.95□□□□□ -1.94
LAMA4-207ENST00000424408 NEBP20929 6669 aa2.94□□□□□ -1.94
LAMA4-207ENST00000424408 USH2AO75445 5202 aa2.93□□□□□ -1.94
LAMA4-207ENST00000424408 MACF1Q9UPN3 7388 aaKnown RBP2.89□□□□□ -1.95
LAMA4-207ENST00000424408 GPR98Q8WXG9 6306 aa2.88□□□□□ -1.95
LAMA4-207ENST00000424408 SSPOA2VEC9 5147 aa2.87□□□□□ -1.95
LAMA4-207ENST00000424408 KRTAP4-11Q9BYQ6 195 aa2.86□□□□□ -1.95
LAMA4-207ENST00000424408 KMT2DO14686 5537 aa2.75□□□□□ -1.97
LAMA4-207ENST00000424408 FCGBPQ9Y6R7 5405 aaPredicted RBP2.7□□□□□ -1.98
LAMA4-207ENST00000424408 KRTAP9-9Q9BYP9 154 aa2.64□□□□□ -1.99
LAMA4-207ENST00000424408 DSTQ03001 7570 aaKnown RBP2.61□□□□□ -1.99
LAMA4-207ENST00000424408 MDN1Q9NU22 5596 aa2.59□□□□□ -1.99
LAMA4-207ENST00000424408 KRTAP20-2Q3LI61 65 aa2.57□□□□□ -2
LAMA4-207ENST00000424408 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
LAMA4-207ENST00000424408 KRTAP4-6Q9BYQ5 205 aa2.51□□□□□ -2.01
LAMA4-207ENST00000424408 KRTAP5-4Q6L8H1 288 aa2.48□□□□□ -2.01
LAMA4-207ENST00000424408 KRTAP5-5Q701N2 237 aaPredicted RBP2.47□□□□□ -2.01
LAMA4-207ENST00000424408 KRTAP4-12Q9BQ66 201 aa2.41□□□□□ -2.02
LAMA4-207ENST00000424408 KRTAP4-2Q9BYR5 136 aa2.41□□□□□ -2.02
LAMA4-207ENST00000424408 AHNAK2Q8IVF2 5795 aa2.41□□□□□ -2.02
LAMA4-207ENST00000424408 MUC12Q9UKN1 5478 aa2.35□□□□□ -2.03
LAMA4-207ENST00000424408 HMCN1Q96RW7 5635 aa2.33□□□□□ -2.04
LAMA4-207ENST00000424408 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
LAMA4-207ENST00000424408 KRTAP5-3Q6L8H2 238 aa2.29□□□□□ -2.04
LAMA4-207ENST00000424408 AHNAKQ09666 5890 aaKnown RBP2.09□□□□□ -2.08
LAMA4-207ENST00000424408 MUC5ACP98088 5654 aa2.06□□□□□ -2.08
LAMA4-207ENST00000424408 KRTAP5-7Q6L8G8 165 aa1.98□□□□□ -2.09
LAMA4-207ENST00000424408 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
LAMA4-207ENST00000424408 KRTAP5-2Q701N4 177 aa1.95□□□□□ -2.1
LAMA4-207ENST00000424408 KRTAP5-10Q6L8G5 202 aa1.89□□□□□ -2.11
LAMA4-207ENST00000424408 MUC5BQ9HC84 5762 aaPredicted RBP1.83□□□□□ -2.12
LAMA4-207ENST00000424408 PHGR1C9JFL3 82 aa1.73□□□□□ -2.13
LAMA4-207ENST00000424408 KRTAP5-11Q6L8G4 156 aa1.71□□□□□ -2.14
LAMA4-207ENST00000424408 KRTAP5-1Q6L8H4 278 aa1.67□□□□□ -2.14
LAMA4-207ENST00000424408 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
LAMA4-207ENST00000424408 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.55□□□□□ -2.16
LAMA4-207ENST00000424408 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
LAMA4-207ENST00000424408 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 145 ms