RNA–Protein interactions for RNA: ENST00000424326.5

SCN7A-203, Transcript of sodium voltage-gated channel alpha subunit 7, humanhuman

TSL 1 (best)

Gene SCN7A, Length 5,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7A-203ENST00000424326 UBR4Q5T4S7 5183 aa2.59□□□□□ -1.99
SCN7A-203ENST00000424326 KRTAP12-4P60329 112 aa2.54□□□□□ -2
SCN7A-203ENST00000424326 MT1MQ8N339 61 aa2.54□□□□□ -2
SCN7A-203ENST00000424326 KRTAP19-7Q3SYF9 63 aa2.53□□□□□ -2.01
SCN7A-203ENST00000424326 KRTAP6-3Q3LI67 103 aa2.51□□□□□ -2.01
SCN7A-203ENST00000424326 LCE1AQ5T7P2 110 aa2.49□□□□□ -2.01
SCN7A-203ENST00000424326 MUC2Q02817 5179 aa2.45□□□□□ -2.02
SCN7A-203ENST00000424326 KRTAP4-7Q9BYR0 210 aa2.43□□□□□ -2.02
SCN7A-203ENST00000424326 LCE3BQ5TA77 95 aa2.43□□□□□ -2.02
SCN7A-203ENST00000424326 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.42□□□□□ -2.02
SCN7A-203ENST00000424326 KRTAP9-7A8MTY7 169 aa2.4□□□□□ -2.02
SCN7A-203ENST00000424326 LCE5AQ5TCM9 118 aa2.38□□□□□ -2.03
SCN7A-203ENST00000424326 MT1AP04731 61 aa2.35□□□□□ -2.03
SCN7A-203ENST00000424326 MT3P25713 68 aa2.34□□□□□ -2.03
SCN7A-203ENST00000424326 USH2AO75445 5202 aa2.34□□□□□ -2.03
SCN7A-203ENST00000424326 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.04
SCN7A-203ENST00000424326 KRTAP2-3P0C7H8 128 aa2.33□□□□□ -2.04
SCN7A-203ENST00000424326 KRTAP4-3Q9BYR4 195 aa2.33□□□□□ -2.04
SCN7A-203ENST00000424326 KRTAP2-4Q9BYR9 128 aa2.33□□□□□ -2.04
SCN7A-203ENST00000424326 KRTAP20-1Q3LI63 56 aa2.32□□□□□ -2.04
SCN7A-203ENST00000424326 KRTAP5-9P26371 169 aa2.31□□□□□ -2.04
SCN7A-203ENST00000424326 LCE3EQ5T5B0 92 aa2.3□□□□□ -2.04
SCN7A-203ENST00000424326 LOC100996750A0A140TA64 210 aa2.3□□□□□ -2.04
SCN7A-203ENST00000424326 FSIP2Q5CZC0 6907 aa2.29□□□□□ -2.04
SCN7A-203ENST00000424326 LCE4AQ5TA78 99 aa2.28□□□□□ -2.04
SCN7A-203ENST00000424326 KRTAP2-1Q9BYU5 128 aa2.27□□□□□ -2.05
SCN7A-203ENST00000424326 MT4P47944 62 aa2.25□□□□□ -2.05
SCN7A-203ENST00000424326 KRTAP2-2Q9BYT5 123 aa2.25□□□□□ -2.05
SCN7A-203ENST00000424326 SSPOA2VEC9 5147 aa2.2□□□□□ -2.06
SCN7A-203ENST00000424326 KRTAP9-6A8MVA2 160 aa2.19□□□□□ -2.06
SCN7A-203ENST00000424326 KRTAP9-4Q9BYQ2 154 aa2.19□□□□□ -2.06
SCN7A-203ENST00000424326 KRTAP6-1Q3LI64 71 aa2.16□□□□□ -2.06
SCN7A-203ENST00000424326 FCGBPQ9Y6R7 5405 aaPredicted RBP2.16□□□□□ -2.06
SCN7A-203ENST00000424326 SYNE2Q8WXH0 6885 aaKnown RBP2.15□□□□□ -2.07
SCN7A-203ENST00000424326 KRTAP6-2Q3LI66 62 aa2.08□□□□□ -2.08
SCN7A-203ENST00000424326 MACF1Q9UPN3 7388 aaKnown RBP2.08□□□□□ -2.08
SCN7A-203ENST00000424326 NEBP20929 6669 aa2.07□□□□□ -2.08
SCN7A-203ENST00000424326 LCE1DQ5T752 114 aa2.04□□□□□ -2.08
SCN7A-203ENST00000424326 KRTAP4-9Q9BYQ8 210 aa2.03□□□□□ -2.08
SCN7A-203ENST00000424326 LCE1BQ5T7P3 118 aa1.99□□□□□ -2.09
SCN7A-203ENST00000424326 PRM1P04553 51 aa1.98□□□□□ -2.09
SCN7A-203ENST00000424326 KMT2DO14686 5537 aa1.97□□□□□ -2.09
SCN7A-203ENST00000424326 KRTAP20-2Q3LI61 65 aa1.94□□□□□ -2.1
SCN7A-203ENST00000424326 KRTAP5-5Q701N2 237 aaPredicted RBP1.93□□□□□ -2.1
SCN7A-203ENST00000424326 KRTAP5-4Q6L8H1 288 aa1.92□□□□□ -2.1
SCN7A-203ENST00000424326 SYNE1Q8NF91 8797 aaKnown RBP1.91□□□□□ -2.1
SCN7A-203ENST00000424326 MUC12Q9UKN1 5478 aa1.89□□□□□ -2.11
SCN7A-203ENST00000424326 KRTAP4-6Q9BYQ5 205 aa1.89□□□□□ -2.11
SCN7A-203ENST00000424326 MDN1Q9NU22 5596 aa1.87□□□□□ -2.11
SCN7A-203ENST00000424326 OBSCNQ5VST9 7968 aa1.84□□□□□ -2.11
SCN7A-203ENST00000424326 KRTAP9-9Q9BYP9 154 aa1.8□□□□□ -2.12
SCN7A-203ENST00000424326 DSTQ03001 7570 aaKnown RBP1.79□□□□□ -2.12
SCN7A-203ENST00000424326 LCE1EQ5T753 118 aa1.77□□□□□ -2.13
SCN7A-203ENST00000424326 KRTAP4-11Q9BYQ6 195 aa1.72□□□□□ -2.13
SCN7A-203ENST00000424326 KRTAP5-2Q701N4 177 aa1.66□□□□□ -2.14
SCN7A-203ENST00000424326 KRTAP5-3Q6L8H2 238 aa1.66□□□□□ -2.14
SCN7A-203ENST00000424326 LCE1CQ5T751 118 aa1.63□□□□□ -2.15
SCN7A-203ENST00000424326 LCE1FQ5T754 118 aa1.63□□□□□ -2.15
SCN7A-203ENST00000424326 GPR98Q8WXG9 6306 aa1.57□□□□□ -2.16
SCN7A-203ENST00000424326 KRTAP4-2Q9BYR5 136 aa1.51□□□□□ -2.17
SCN7A-203ENST00000424326 KRTAP4-12Q9BQ66 201 aa1.5□□□□□ -2.17
SCN7A-203ENST00000424326 HMCN1Q96RW7 5635 aa1.5□□□□□ -2.17
SCN7A-203ENST00000424326 KRTAP5-8O75690 187 aa1.47□□□□□ -2.17
SCN7A-203ENST00000424326 MUC5ACP98088 5654 aa1.43□□□□□ -2.18
SCN7A-203ENST00000424326 AHNAK2Q8IVF2 5795 aa1.43□□□□□ -2.18
SCN7A-203ENST00000424326 KRTAP5-1Q6L8H4 278 aa1.41□□□□□ -2.18
SCN7A-203ENST00000424326 KRTAP5-10Q6L8G5 202 aa1.38□□□□□ -2.19
SCN7A-203ENST00000424326 KRTAP5-11Q6L8G4 156 aa1.37□□□□□ -2.19
SCN7A-203ENST00000424326 KRTAP4-4Q9BYR3 166 aa1.36□□□□□ -2.19
SCN7A-203ENST00000424326 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.35□□□□□ -2.19
SCN7A-203ENST00000424326 KRTAP5-7Q6L8G8 165 aa1.34□□□□□ -2.19
SCN7A-203ENST00000424326 MUC5BQ9HC84 5762 aaPredicted RBP1.27□□□□□ -2.21
SCN7A-203ENST00000424326 AHNAKQ09666 5890 aaKnown RBP1.27□□□□□ -2.21
SCN7A-203ENST00000424326 KRTAP21-2Q3LI59 83 aa1.26□□□□□ -2.21
SCN7A-203ENST00000424326 MUC19Q7Z5P9 8384 aa1.25□□□□□ -2.21
SCN7A-203ENST00000424326 PHGR1C9JFL3 82 aa1.14□□□□□ -2.23
SCN7A-203ENST00000424326 KRTAP21-1Q3LI58 79 aa1□□□□□ -2.25
SCN7A-203ENST00000424326 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 61.4 ms