RNA–Protein interactions for RNA: ENST00000422202.5

COL20A1-203, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL20A1, Length 8,097 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-203ENST00000422202 RYR1P21817 5038 aa4.04□□□□□ -1.76
COL20A1-203ENST00000422202 KRTAP4-9Q9BYQ8 210 aa3.94□□□□□ -1.78
COL20A1-203ENST00000422202 KRTAP2-3P0C7H8 128 aa3.91□□□□□ -1.78
COL20A1-203ENST00000422202 KRTAP2-4Q9BYR9 128 aa3.91□□□□□ -1.78
COL20A1-203ENST00000422202 SYNE2Q8WXH0 6885 aaKnown RBP3.91□□□□□ -1.78
COL20A1-203ENST00000422202 LRP2P98164 4655 aa3.88□□□□□ -1.79
COL20A1-203ENST00000422202 MUC17Q685J3 4493 aa3.88□□□□□ -1.79
COL20A1-203ENST00000422202 RYR3Q15413 4870 aa3.86□□□□□ -1.79
COL20A1-203ENST00000422202 KRTAP19-2Q3LHN2 52 aa3.83□□□□□ -1.8
COL20A1-203ENST00000422202 KRTAP2-1Q9BYU5 128 aa3.79□□□□□ -1.8
COL20A1-203ENST00000422202 MT1AP04731 61 aa3.73□□□□□ -1.81
COL20A1-203ENST00000422202 KRTAP2-2Q9BYT5 123 aa3.72□□□□□ -1.81
COL20A1-203ENST00000422202 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.72□□□□□ -1.81
COL20A1-203ENST00000422202 KRTAP6-2Q3LI66 62 aa3.71□□□□□ -1.82
COL20A1-203ENST00000422202 KRTAP6-3Q3LI67 103 aa3.7□□□□□ -1.82
COL20A1-203ENST00000422202 LCE4AQ5TA78 99 aa3.68□□□□□ -1.82
COL20A1-203ENST00000422202 RYR2Q92736 4967 aa3.64□□□□□ -1.83
COL20A1-203ENST00000422202 KRTAP9-9Q9BYP9 154 aa3.64□□□□□ -1.83
COL20A1-203ENST00000422202 HYDINQ4G0P3 5121 aa3.63□□□□□ -1.83
COL20A1-203ENST00000422202 LCE2AQ5TA79 106 aaPredicted RBP3.59□□□□□ -1.84
COL20A1-203ENST00000422202 KRTAP6-1Q3LI64 71 aa3.56□□□□□ -1.84
COL20A1-203ENST00000422202 KRTAP9-4Q9BYQ2 154 aa3.56□□□□□ -1.84
COL20A1-203ENST00000422202 KRTAP19-7Q3SYF9 63 aa3.54□□□□□ -1.84
COL20A1-203ENST00000422202 KMT2CQ8NEZ4 4911 aaKnown RBP3.52□□□□□ -1.85
COL20A1-203ENST00000422202 HERC1Q15751 4861 aa3.51□□□□□ -1.85
COL20A1-203ENST00000422202 FSIP2Q5CZC0 6907 aa3.48□□□□□ -1.85
COL20A1-203ENST00000422202 HERC2O95714 4834 aa3.45□□□□□ -1.86
COL20A1-203ENST00000422202 PCLOQ9Y6V0 5065 aa3.37□□□□□ -1.87
COL20A1-203ENST00000422202 KIAA1109Q2LD37 5005 aa3.34□□□□□ -1.88
COL20A1-203ENST00000422202 HMCN2Q8NDA2 5059 aa3.3□□□□□ -1.88
COL20A1-203ENST00000422202 BIRC6Q9NR09 4857 aa3.25□□□□□ -1.89
COL20A1-203ENST00000422202 KRTAP20-2Q3LI61 65 aa3.24□□□□□ -1.89
COL20A1-203ENST00000422202 KRTAP9-6A8MVA2 160 aa3.22□□□□□ -1.89
COL20A1-203ENST00000422202 KRTAP4-11Q9BYQ6 195 aa3.2□□□□□ -1.9
COL20A1-203ENST00000422202 SYNE1Q8NF91 8797 aaKnown RBP3.15□□□□□ -1.91
COL20A1-203ENST00000422202 EPPK1P58107 5090 aaKnown RBP3.12□□□□□ -1.91
COL20A1-203ENST00000422202 KRTAP4-6Q9BYQ5 205 aa3.1□□□□□ -1.91
COL20A1-203ENST00000422202 MUC2Q02817 5179 aa3.08□□□□□ -1.92
COL20A1-203ENST00000422202 KRTAP4-12Q9BQ66 201 aa3.05□□□□□ -1.92
COL20A1-203ENST00000422202 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
COL20A1-203ENST00000422202 KRTAP4-4Q9BYR3 166 aa3.04□□□□□ -1.92
COL20A1-203ENST00000422202 OBSCNQ5VST9 7968 aa2.99□□□□□ -1.93
COL20A1-203ENST00000422202 FAT4Q6V0I7 4981 aa2.93□□□□□ -1.94
COL20A1-203ENST00000422202 KRTAP5-9P26371 169 aa2.89□□□□□ -1.95
COL20A1-203ENST00000422202 MACF1Q9UPN3 7388 aaKnown RBP2.86□□□□□ -1.95
COL20A1-203ENST00000422202 RNF213Q63HN8 5207 aa2.84□□□□□ -1.95
COL20A1-203ENST00000422202 KMT2DO14686 5537 aa2.82□□□□□ -1.96
COL20A1-203ENST00000422202 DSTQ03001 7570 aaKnown RBP2.81□□□□□ -1.96
COL20A1-203ENST00000422202 ABCA13Q86UQ4 5058 aa2.77□□□□□ -1.97
COL20A1-203ENST00000422202 NEBP20929 6669 aa2.77□□□□□ -1.97
COL20A1-203ENST00000422202 UBR4Q5T4S7 5183 aa2.75□□□□□ -1.97
COL20A1-203ENST00000422202 KRTAP5-4Q6L8H1 288 aa2.64□□□□□ -1.99
COL20A1-203ENST00000422202 KRTAP5-5Q701N2 237 aaPredicted RBP2.56□□□□□ -2
COL20A1-203ENST00000422202 FCGBPQ9Y6R7 5405 aaPredicted RBP2.53□□□□□ -2
COL20A1-203ENST00000422202 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
COL20A1-203ENST00000422202 KRTAP5-3Q6L8H2 238 aa2.4□□□□□ -2.03
COL20A1-203ENST00000422202 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.03
COL20A1-203ENST00000422202 USH2AO75445 5202 aa2.27□□□□□ -2.05
COL20A1-203ENST00000422202 SSPOA2VEC9 5147 aa2.27□□□□□ -2.05
COL20A1-203ENST00000422202 GPR98Q8WXG9 6306 aa2.26□□□□□ -2.05
COL20A1-203ENST00000422202 MDN1Q9NU22 5596 aa2.21□□□□□ -2.06
COL20A1-203ENST00000422202 KRTAP5-8O75690 187 aa2.21□□□□□ -2.06
COL20A1-203ENST00000422202 MUC12Q9UKN1 5478 aa2.14□□□□□ -2.07
COL20A1-203ENST00000422202 MUC5ACP98088 5654 aa2.04□□□□□ -2.08
COL20A1-203ENST00000422202 KRTAP5-10Q6L8G5 202 aa2□□□□□ -2.09
COL20A1-203ENST00000422202 KRTAP5-2Q701N4 177 aa1.96□□□□□ -2.1
COL20A1-203ENST00000422202 KRTAP5-11Q6L8G4 156 aa1.82□□□□□ -2.12
COL20A1-203ENST00000422202 HMCN1Q96RW7 5635 aa1.78□□□□□ -2.12
COL20A1-203ENST00000422202 MUC5BQ9HC84 5762 aaPredicted RBP1.77□□□□□ -2.13
COL20A1-203ENST00000422202 KRTAP5-1Q6L8H4 278 aa1.75□□□□□ -2.13
COL20A1-203ENST00000422202 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
COL20A1-203ENST00000422202 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.67□□□□□ -2.14
COL20A1-203ENST00000422202 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.14
COL20A1-203ENST00000422202 AHNAK2Q8IVF2 5795 aa1.57□□□□□ -2.16
COL20A1-203ENST00000422202 AHNAKQ09666 5890 aaKnown RBP1.54□□□□□ -2.16
COL20A1-203ENST00000422202 KRTAP5-7Q6L8G8 165 aa1.47□□□□□ -2.17
COL20A1-203ENST00000422202 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 151.7 ms