RNA–Protein interactions for RNA: ENST00000420886.6

SBNO1-202, Transcript of strawberry notch homolog 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SBNO1, Length 10,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1-202ENST00000420886 KRTAP9-7A8MTY7 169 aa1.78□□□□□ -2.12
SBNO1-202ENST00000420886 KRTAP4-9Q9BYQ8 210 aa1.78□□□□□ -2.12
SBNO1-202ENST00000420886 HERC2O95714 4834 aa1.78□□□□□ -2.13
SBNO1-202ENST00000420886 SPRR2EP22531 72 aa1.77□□□□□ -2.13
SBNO1-202ENST00000420886 RYR2Q92736 4967 aa1.76□□□□□ -2.13
SBNO1-202ENST00000420886 RYR3Q15413 4870 aa1.76□□□□□ -2.13
SBNO1-202ENST00000420886 KRTAP2-2Q9BYT5 123 aa1.76□□□□□ -2.13
SBNO1-202ENST00000420886 KRTAP4-3Q9BYR4 195 aa1.75□□□□□ -2.13
SBNO1-202ENST00000420886 SPRR2DP22532 72 aa1.74□□□□□ -2.13
SBNO1-202ENST00000420886 LCE2DQ5TA82 110 aaPredicted RBP1.74□□□□□ -2.13
SBNO1-202ENST00000420886 KRTAP9-6A0A140TA67 174 aa1.73□□□□□ -2.13
SBNO1-202ENST00000420886 HMCN2Q8NDA2 5059 aa1.69□□□□□ -2.14
SBNO1-202ENST00000420886 LCE1AQ5T7P2 110 aa1.67□□□□□ -2.14
SBNO1-202ENST00000420886 KRTAP6-1Q3LI64 71 aa1.66□□□□□ -2.14
SBNO1-202ENST00000420886 KRTAP19-6Q3LI70 58 aa1.65□□□□□ -2.15
SBNO1-202ENST00000420886 EPPK1P58107 5090 aaKnown RBP1.65□□□□□ -2.15
SBNO1-202ENST00000420886 KRTAP6-3Q3LI67 103 aa1.62□□□□□ -2.15
SBNO1-202ENST00000420886 SYNE1Q8NF91 8797 aaKnown RBP1.62□□□□□ -2.15
SBNO1-202ENST00000420886 ABCA13Q86UQ4 5058 aa1.62□□□□□ -2.15
SBNO1-202ENST00000420886 KRTAP9-4Q9BYQ2 154 aa1.62□□□□□ -2.15
SBNO1-202ENST00000420886 KIAA1109Q2LD37 5005 aa1.61□□□□□ -2.15
SBNO1-202ENST00000420886 LCE5AQ5TCM9 118 aa1.61□□□□□ -2.15
SBNO1-202ENST00000420886 LCE1DQ5T752 114 aa1.58□□□□□ -2.16
SBNO1-202ENST00000420886 UBR4Q5T4S7 5183 aa1.57□□□□□ -2.16
SBNO1-202ENST00000420886 LCE1EQ5T753 118 aa1.57□□□□□ -2.16
SBNO1-202ENST00000420886 SYNE2Q8WXH0 6885 aaKnown RBP1.57□□□□□ -2.16
SBNO1-202ENST00000420886 MUC2Q02817 5179 aa1.56□□□□□ -2.16
SBNO1-202ENST00000420886 LCE1BQ5T7P3 118 aa1.56□□□□□ -2.16
SBNO1-202ENST00000420886 KRTAP5-5Q701N2 237 aaPredicted RBP1.55□□□□□ -2.16
SBNO1-202ENST00000420886 LCE2AQ5TA79 106 aaPredicted RBP1.52□□□□□ -2.17
SBNO1-202ENST00000420886 KMT2DO14686 5537 aa1.5□□□□□ -2.17
SBNO1-202ENST00000420886 RNF213Q63HN8 5207 aa1.49□□□□□ -2.17
SBNO1-202ENST00000420886 MT4P47944 62 aa1.49□□□□□ -2.17
SBNO1-202ENST00000420886 FSIP2Q5CZC0 6907 aa1.48□□□□□ -2.17
SBNO1-202ENST00000420886 KRTAP4-11Q9BYQ6 195 aa1.46□□□□□ -2.18
SBNO1-202ENST00000420886 FAT4Q6V0I7 4981 aa1.4□□□□□ -2.19
SBNO1-202ENST00000420886 LCE1FQ5T754 118 aa1.39□□□□□ -2.19
SBNO1-202ENST00000420886 KRTAP20-1Q3LI63 56 aa1.39□□□□□ -2.19
SBNO1-202ENST00000420886 LCE4AQ5TA78 99 aa1.35□□□□□ -2.19
SBNO1-202ENST00000420886 NEBP20929 6669 aa1.34□□□□□ -2.19
SBNO1-202ENST00000420886 USH2AO75445 5202 aa1.33□□□□□ -2.2
SBNO1-202ENST00000420886 SSPOA2VEC9 5147 aa1.29□□□□□ -2.2
SBNO1-202ENST00000420886 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.29□□□□□ -2.2
SBNO1-202ENST00000420886 FCGBPQ9Y6R7 5405 aaPredicted RBP1.24□□□□□ -2.21
SBNO1-202ENST00000420886 LCE1CQ5T751 118 aa1.24□□□□□ -2.21
SBNO1-202ENST00000420886 OBSCNQ5VST9 7968 aa1.23□□□□□ -2.21
SBNO1-202ENST00000420886 MACF1Q9UPN3 7388 aaKnown RBP1.23□□□□□ -2.21
SBNO1-202ENST00000420886 DSTQ03001 7570 aaKnown RBP1.21□□□□□ -2.22
SBNO1-202ENST00000420886 KRTAP5-9P26371 169 aa1.2□□□□□ -2.22
SBNO1-202ENST00000420886 GPR98Q8WXG9 6306 aa1.17□□□□□ -2.22
SBNO1-202ENST00000420886 MDN1Q9NU22 5596 aa1.16□□□□□ -2.22
SBNO1-202ENST00000420886 KRTAP5-10Q6L8G5 202 aa1.15□□□□□ -2.23
SBNO1-202ENST00000420886 KRTAP20-2Q3LI61 65 aa1.15□□□□□ -2.23
SBNO1-202ENST00000420886 KRTAP4-6Q9BYQ5 205 aa1.14□□□□□ -2.23
SBNO1-202ENST00000420886 KRTAP5-4Q6L8H1 288 aa1.14□□□□□ -2.23
SBNO1-202ENST00000420886 MUC19Q7Z5P9 8384 aa1.13□□□□□ -2.23
SBNO1-202ENST00000420886 MUC12Q9UKN1 5478 aa1.12□□□□□ -2.23
SBNO1-202ENST00000420886 KRTAP4-4Q9BYR3 166 aa1.11□□□□□ -2.23
SBNO1-202ENST00000420886 KRTAP9-9Q9BYP9 154 aa1.09□□□□□ -2.23
SBNO1-202ENST00000420886 KRTAP21-1Q3LI58 79 aa1.06□□□□□ -2.24
SBNO1-202ENST00000420886 AHNAK2Q8IVF2 5795 aa1.06□□□□□ -2.24
SBNO1-202ENST00000420886 KRTAP5-2Q701N4 177 aa1.03□□□□□ -2.24
SBNO1-202ENST00000420886 MUC5BQ9HC84 5762 aaPredicted RBP0.98□□□□□ -2.25
SBNO1-202ENST00000420886 HMCN1Q96RW7 5635 aa0.98□□□□□ -2.25
SBNO1-202ENST00000420886 KRTAP5-1Q6L8H4 278 aa0.97□□□□□ -2.25
SBNO1-202ENST00000420886 KRTAP4-12Q9BQ66 201 aa0.94□□□□□ -2.26
SBNO1-202ENST00000420886 KRTAP4-2Q9BYR5 136 aa0.94□□□□□ -2.26
SBNO1-202ENST00000420886 AHNAKQ09666 5890 aaKnown RBP0.94□□□□□ -2.26
SBNO1-202ENST00000420886 KRTAP5-3Q6L8H2 238 aa0.91□□□□□ -2.26
SBNO1-202ENST00000420886 KRTAP21-2Q3LI59 83 aa0.91□□□□□ -2.26
SBNO1-202ENST00000420886 MUC5ACP98088 5654 aa0.91□□□□□ -2.26
SBNO1-202ENST00000420886 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.88□□□□□ -2.27
SBNO1-202ENST00000420886 KRTAP5-11Q6L8G4 156 aa0.86□□□□□ -2.27
SBNO1-202ENST00000420886 PHGR1C9JFL3 82 aa0.77□□□□□ -2.29
SBNO1-202ENST00000420886 KRTAP5-8O75690 187 aa0.76□□□□□ -2.29
SBNO1-202ENST00000420886 KRTAP5-7Q6L8G8 165 aa0.76□□□□□ -2.29
SBNO1-202ENST00000420886 MUC16Q8WXI7 14507 aa0.71□□□□□ -2.3
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms