RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 KMT2CQ8NEZ4 4911 aaKnown RBP5.52□□□□□ -1.53
HCG11-201ENST00000411553 KRTAP4-3Q9BYR4 195 aa5.51□□□□□ -1.53
HCG11-201ENST00000411553 HYDINQ4G0P3 5121 aa5.47□□□□□ -1.53
HCG11-201ENST00000411553 FLGP20930 4061 aaPredicted RBP5.47□□□□□ -1.53
HCG11-201ENST00000411553 MUC17Q685J3 4493 aa5.44□□□□□ -1.54
HCG11-201ENST00000411553 MT1AP04731 61 aa5.36□□□□□ -1.55
HCG11-201ENST00000411553 TNXBP22105 4242 aa5.36□□□□□ -1.55
HCG11-201ENST00000411553 KRTAP9-6A0A140TA67 174 aa5.36□□□□□ -1.55
HCG11-201ENST00000411553 ABCA13Q86UQ4 5058 aa5.32□□□□□ -1.56
HCG11-201ENST00000411553 KRTAP19-7Q3SYF9 63 aa5.3□□□□□ -1.56
HCG11-201ENST00000411553 SYNE1Q8NF91 8797 aaKnown RBP5.28□□□□□ -1.56
HCG11-201ENST00000411553 LCE2AQ5TA79 106 aaPredicted RBP5.28□□□□□ -1.56
HCG11-201ENST00000411553 KRTAP20-1Q3LI63 56 aa5.24□□□□□ -1.57
HCG11-201ENST00000411553 LCE5AQ5TCM9 118 aa5.23□□□□□ -1.57
HCG11-201ENST00000411553 KRTAP2-3P0C7H8 128 aa5.21□□□□□ -1.57
HCG11-201ENST00000411553 KRTAP2-4Q9BYR9 128 aa5.21□□□□□ -1.57
HCG11-201ENST00000411553 KRTAP2-1Q9BYU5 128 aa5.21□□□□□ -1.57
HCG11-201ENST00000411553 KRTAP4-9Q9BYQ8 210 aa5.17□□□□□ -1.58
HCG11-201ENST00000411553 RNF213Q63HN8 5207 aa5.14□□□□□ -1.59
HCG11-201ENST00000411553 FAT4Q6V0I7 4981 aa5.09□□□□□ -1.59
HCG11-201ENST00000411553 KRTAP9-7A8MTY7 169 aa5.08□□□□□ -1.6
HCG11-201ENST00000411553 LCE1AQ5T7P2 110 aa5.08□□□□□ -1.6
HCG11-201ENST00000411553 FSIP2Q5CZC0 6907 aa5.05□□□□□ -1.6
HCG11-201ENST00000411553 KRTAP6-3Q3LI67 103 aa5.05□□□□□ -1.6
HCG11-201ENST00000411553 UBR4Q5T4S7 5183 aa5.03□□□□□ -1.6
HCG11-201ENST00000411553 SYNE2Q8WXH0 6885 aaKnown RBP5.01□□□□□ -1.61
HCG11-201ENST00000411553 HMCN2Q8NDA2 5059 aa4.99□□□□□ -1.61
HCG11-201ENST00000411553 KRTAP6-2Q3LI66 62 aa4.97□□□□□ -1.61
HCG11-201ENST00000411553 KRTAP6-1Q3LI64 71 aa4.97□□□□□ -1.61
HCG11-201ENST00000411553 MUC2Q02817 5179 aa4.96□□□□□ -1.62
HCG11-201ENST00000411553 KRTAP9-4Q9BYQ2 154 aa4.94□□□□□ -1.62
HCG11-201ENST00000411553 LCE4AQ5TA78 99 aa4.94□□□□□ -1.62
HCG11-201ENST00000411553 OBSCNQ5VST9 7968 aa4.86□□□□□ -1.63
HCG11-201ENST00000411553 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.84□□□□□ -1.63
HCG11-201ENST00000411553 KRTAP2-2Q9BYT5 123 aa4.83□□□□□ -1.64
HCG11-201ENST00000411553 LCE1CQ5T751 118 aa4.81□□□□□ -1.64
HCG11-201ENST00000411553 LCE1EQ5T753 118 aa4.81□□□□□ -1.64
HCG11-201ENST00000411553 LCE1FQ5T754 118 aa4.81□□□□□ -1.64
HCG11-201ENST00000411553 KRTAP9-6A8MVA2 160 aa4.77□□□□□ -1.65
HCG11-201ENST00000411553 KRTAP9-9Q9BYP9 154 aa4.41□□□□□ -1.7
HCG11-201ENST00000411553 USH2AO75445 5202 aa4.36□□□□□ -1.71
HCG11-201ENST00000411553 FCGBPQ9Y6R7 5405 aaPredicted RBP4.25□□□□□ -1.73
HCG11-201ENST00000411553 DSTQ03001 7570 aaKnown RBP4.22□□□□□ -1.73
HCG11-201ENST00000411553 NEBP20929 6669 aa4.17□□□□□ -1.74
HCG11-201ENST00000411553 MACF1Q9UPN3 7388 aaKnown RBP4.14□□□□□ -1.75
HCG11-201ENST00000411553 KRTAP5-9P26371 169 aa4.13□□□□□ -1.75
HCG11-201ENST00000411553 KRTAP4-6Q9BYQ5 205 aa4.09□□□□□ -1.76
HCG11-201ENST00000411553 KRTAP4-11Q9BYQ6 195 aa4.07□□□□□ -1.76
HCG11-201ENST00000411553 KRTAP20-2Q3LI61 65 aa4.05□□□□□ -1.76
HCG11-201ENST00000411553 KMT2DO14686 5537 aa3.93□□□□□ -1.78
HCG11-201ENST00000411553 SSPOA2VEC9 5147 aa3.92□□□□□ -1.78
HCG11-201ENST00000411553 MUC19Q7Z5P9 8384 aa3.88□□□□□ -1.79
HCG11-201ENST00000411553 KRTAP4-4Q9BYR3 166 aa3.81□□□□□ -1.8
HCG11-201ENST00000411553 KRTAP4-12Q9BQ66 201 aa3.78□□□□□ -1.8
HCG11-201ENST00000411553 KRTAP4-2Q9BYR5 136 aa3.78□□□□□ -1.8
HCG11-201ENST00000411553 GPR98Q8WXG9 6306 aa3.77□□□□□ -1.81
HCG11-201ENST00000411553 MDN1Q9NU22 5596 aa3.76□□□□□ -1.81
HCG11-201ENST00000411553 KRTAP5-4Q6L8H1 288 aa3.75□□□□□ -1.81
HCG11-201ENST00000411553 MUC12Q9UKN1 5478 aa3.7□□□□□ -1.82
HCG11-201ENST00000411553 KRTAP5-5Q701N2 237 aaPredicted RBP3.51□□□□□ -1.85
HCG11-201ENST00000411553 KRTAP5-3Q6L8H2 238 aa3.27□□□□□ -1.89
HCG11-201ENST00000411553 MUC5ACP98088 5654 aa3.21□□□□□ -1.9
HCG11-201ENST00000411553 AHNAK2Q8IVF2 5795 aa3.08□□□□□ -1.92
HCG11-201ENST00000411553 HMCN1Q96RW7 5635 aa3.03□□□□□ -1.92
HCG11-201ENST00000411553 KRTAP5-8O75690 187 aa3□□□□□ -1.93
HCG11-201ENST00000411553 PHGR1C9JFL3 82 aa2.87□□□□□ -1.95
HCG11-201ENST00000411553 KRTAP5-10Q6L8G5 202 aa2.86□□□□□ -1.95
HCG11-201ENST00000411553 KRTAP5-2Q701N4 177 aa2.75□□□□□ -1.97
HCG11-201ENST00000411553 MUC5BQ9HC84 5762 aaPredicted RBP2.73□□□□□ -1.97
HCG11-201ENST00000411553 KRTAP5-11Q6L8G4 156 aa2.6□□□□□ -1.99
HCG11-201ENST00000411553 AHNAKQ09666 5890 aaKnown RBP2.59□□□□□ -2
HCG11-201ENST00000411553 KRTAP5-1Q6L8H4 278 aa2.56□□□□□ -2
HCG11-201ENST00000411553 KRTAP21-2Q3LI59 83 aa2.4□□□□□ -2.02
HCG11-201ENST00000411553 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
HCG11-201ENST00000411553 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.18□□□□□ -2.06
HCG11-201ENST00000411553 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
HCG11-201ENST00000411553 MUC16Q8WXI7 14507 aa1.65□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 13 ms