RNA–Protein interactions for RNA: ENST00000410041.1

DYSF-209, Transcript of dysferlin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DYSF, Length 6,594 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-209ENST00000410041 KRTAP2-3P0C7H8 128 aa4.04□□□□□ -1.76
DYSF-209ENST00000410041 KRTAP2-4Q9BYR9 128 aa4.04□□□□□ -1.76
DYSF-209ENST00000410041 KRTAP2-1Q9BYU5 128 aa4.04□□□□□ -1.76
DYSF-209ENST00000410041 HMCN2Q8NDA2 5059 aa4.03□□□□□ -1.76
DYSF-209ENST00000410041 MT1MQ8N339 61 aa4.01□□□□□ -1.77
DYSF-209ENST00000410041 KRTAP19-7Q3SYF9 63 aa4.01□□□□□ -1.77
DYSF-209ENST00000410041 LOC100996750A0A140TA64 210 aa3.95□□□□□ -1.78
DYSF-209ENST00000410041 KRTAP4-3Q9BYR4 195 aa3.91□□□□□ -1.78
DYSF-209ENST00000410041 PRM1P04553 51 aa3.9□□□□□ -1.78
DYSF-209ENST00000410041 KRTAP19-6Q3LI70 58 aa3.88□□□□□ -1.79
DYSF-209ENST00000410041 KRTAP9-6A8MVA2 160 aa3.88□□□□□ -1.79
DYSF-209ENST00000410041 LCE2DQ5TA82 110 aaPredicted RBP3.84□□□□□ -1.8
DYSF-209ENST00000410041 MT3P25713 68 aa3.8□□□□□ -1.8
DYSF-209ENST00000410041 MUC2Q02817 5179 aa3.77□□□□□ -1.81
DYSF-209ENST00000410041 MT1AP04731 61 aa3.76□□□□□ -1.81
DYSF-209ENST00000410041 FSIP2Q5CZC0 6907 aa3.75□□□□□ -1.81
DYSF-209ENST00000410041 LCE2AQ5TA79 106 aaPredicted RBP3.75□□□□□ -1.81
DYSF-209ENST00000410041 MT4P47944 62 aa3.71□□□□□ -1.81
DYSF-209ENST00000410041 KRTAP4-9Q9BYQ8 210 aa3.71□□□□□ -1.81
DYSF-209ENST00000410041 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
DYSF-209ENST00000410041 KRTAP9-2Q9BYQ4 174 aa3.65□□□□□ -1.83
DYSF-209ENST00000410041 LCE1BQ5T7P3 118 aa3.59□□□□□ -1.83
DYSF-209ENST00000410041 USH2AO75445 5202 aa3.56□□□□□ -1.84
DYSF-209ENST00000410041 LCE1DQ5T752 114 aa3.56□□□□□ -1.84
DYSF-209ENST00000410041 KRTAP6-1Q3LI64 71 aa3.55□□□□□ -1.84
DYSF-209ENST00000410041 FCGBPQ9Y6R7 5405 aaPredicted RBP3.54□□□□□ -1.84
DYSF-209ENST00000410041 LCE5AQ5TCM9 118 aa3.52□□□□□ -1.85
DYSF-209ENST00000410041 KRTAP6-2Q3LI66 62 aa3.5□□□□□ -1.85
DYSF-209ENST00000410041 KRTAP9-7A8MTY7 169 aa3.46□□□□□ -1.86
DYSF-209ENST00000410041 SYNE2Q8WXH0 6885 aaKnown RBP3.44□□□□□ -1.86
DYSF-209ENST00000410041 KRTAP9-4Q9BYQ2 154 aa3.42□□□□□ -1.86
DYSF-209ENST00000410041 KRTAP9-6A0A140TA67 174 aa3.41□□□□□ -1.86
DYSF-209ENST00000410041 LCE1AQ5T7P2 110 aa3.39□□□□□ -1.87
DYSF-209ENST00000410041 KMT2DO14686 5537 aa3.37□□□□□ -1.87
DYSF-209ENST00000410041 DSTQ03001 7570 aaKnown RBP3.35□□□□□ -1.87
DYSF-209ENST00000410041 KRTAP20-1Q3LI63 56 aa3.32□□□□□ -1.88
DYSF-209ENST00000410041 KRTAP6-3Q3LI67 103 aa3.27□□□□□ -1.89
DYSF-209ENST00000410041 KRTAP2-2Q9BYT5 123 aa3.2□□□□□ -1.9
DYSF-209ENST00000410041 LCE4AQ5TA78 99 aa3.18□□□□□ -1.9
DYSF-209ENST00000410041 SSPOA2VEC9 5147 aa3.18□□□□□ -1.9
DYSF-209ENST00000410041 MUC12Q9UKN1 5478 aa3.17□□□□□ -1.9
DYSF-209ENST00000410041 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
DYSF-209ENST00000410041 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
DYSF-209ENST00000410041 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
DYSF-209ENST00000410041 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.15□□□□□ -1.91
DYSF-209ENST00000410041 MACF1Q9UPN3 7388 aaKnown RBP3□□□□□ -1.93
DYSF-209ENST00000410041 KRTAP5-5Q701N2 237 aaPredicted RBP2.96□□□□□ -1.93
DYSF-209ENST00000410041 MUC19Q7Z5P9 8384 aa2.95□□□□□ -1.94
DYSF-209ENST00000410041 KRTAP5-9P26371 169 aa2.94□□□□□ -1.94
DYSF-209ENST00000410041 MDN1Q9NU22 5596 aa2.9□□□□□ -1.95
DYSF-209ENST00000410041 KRTAP9-9Q9BYP9 154 aa2.86□□□□□ -1.95
DYSF-209ENST00000410041 KRTAP4-11Q9BYQ6 195 aa2.86□□□□□ -1.95
DYSF-209ENST00000410041 NEBP20929 6669 aa2.79□□□□□ -1.96
DYSF-209ENST00000410041 KRTAP4-6Q9BYQ5 205 aa2.75□□□□□ -1.97
DYSF-209ENST00000410041 KRTAP20-2Q3LI61 65 aa2.74□□□□□ -1.97
DYSF-209ENST00000410041 KRTAP5-4Q6L8H1 288 aa2.5□□□□□ -2.01
DYSF-209ENST00000410041 KRTAP4-4Q9BYR3 166 aa2.5□□□□□ -2.01
DYSF-209ENST00000410041 MUC5ACP98088 5654 aa2.47□□□□□ -2.01
DYSF-209ENST00000410041 KRTAP4-12Q9BQ66 201 aa2.45□□□□□ -2.02
DYSF-209ENST00000410041 KRTAP4-2Q9BYR5 136 aa2.45□□□□□ -2.02
DYSF-209ENST00000410041 GPR98Q8WXG9 6306 aa2.44□□□□□ -2.02
DYSF-209ENST00000410041 HMCN1Q96RW7 5635 aa2.43□□□□□ -2.02
DYSF-209ENST00000410041 KRTAP5-10Q6L8G5 202 aa2.3□□□□□ -2.04
DYSF-209ENST00000410041 AHNAK2Q8IVF2 5795 aa2.3□□□□□ -2.04
DYSF-209ENST00000410041 KRTAP5-3Q6L8H2 238 aa2.2□□□□□ -2.06
DYSF-209ENST00000410041 KRTAP5-2Q701N4 177 aa2.19□□□□□ -2.06
DYSF-209ENST00000410041 MUC5BQ9HC84 5762 aaPredicted RBP1.98□□□□□ -2.09
DYSF-209ENST00000410041 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
DYSF-209ENST00000410041 KRTAP5-1Q6L8H4 278 aa1.94□□□□□ -2.1
DYSF-209ENST00000410041 KRTAP21-2Q3LI59 83 aa1.93□□□□□ -2.1
DYSF-209ENST00000410041 KRTAP5-11Q6L8G4 156 aa1.91□□□□□ -2.1
DYSF-209ENST00000410041 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
DYSF-209ENST00000410041 AHNAKQ09666 5890 aaKnown RBP1.85□□□□□ -2.11
DYSF-209ENST00000410041 PHGR1C9JFL3 82 aa1.84□□□□□ -2.11
DYSF-209ENST00000410041 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.82□□□□□ -2.12
DYSF-209ENST00000410041 KRTAP5-7Q6L8G8 165 aa1.53□□□□□ -2.16
DYSF-209ENST00000410041 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 300.4 ms