RNA–Protein interactions for RNA: ENST00000407627.6

ELAVL1-201, Transcript of ELAV like RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ELAVL1, Length 6,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELAVL1-201ENST00000407627 MT1MQ8N339 61 aa4.42□□□□□ -1.7
ELAVL1-201ENST00000407627 KRTAP9-6A0A140TA67 174 aa4.41□□□□□ -1.7
ELAVL1-201ENST00000407627 LCE3DQ9BYE3 92 aa4.41□□□□□ -1.7
ELAVL1-201ENST00000407627 LCE3EQ5T5B0 92 aa4.33□□□□□ -1.72
ELAVL1-201ENST00000407627 MT4P47944 62 aa4.31□□□□□ -1.72
ELAVL1-201ENST00000407627 HMCN2Q8NDA2 5059 aa4.29□□□□□ -1.72
ELAVL1-201ENST00000407627 KRTAP4-3Q9BYR4 195 aa4.25□□□□□ -1.73
ELAVL1-201ENST00000407627 LOC100996750A0A140TA64 210 aa4.25□□□□□ -1.73
ELAVL1-201ENST00000407627 MT3P25713 68 aa4.24□□□□□ -1.73
ELAVL1-201ENST00000407627 UBR4Q5T4S7 5183 aa4.24□□□□□ -1.73
ELAVL1-201ENST00000407627 KRTAP19-7Q3SYF9 63 aa4.22□□□□□ -1.73
ELAVL1-201ENST00000407627 KRTAP9-7A8MTY7 169 aa4.13□□□□□ -1.75
ELAVL1-201ENST00000407627 KRTAP20-1Q3LI63 56 aa4.12□□□□□ -1.75
ELAVL1-201ENST00000407627 KRTAP6-3Q3LI67 103 aa4.12□□□□□ -1.75
ELAVL1-201ENST00000407627 FSIP2Q5CZC0 6907 aa4.1□□□□□ -1.75
ELAVL1-201ENST00000407627 MT1AP04731 61 aa4.08□□□□□ -1.76
ELAVL1-201ENST00000407627 LCE1AQ5T7P2 110 aa4.05□□□□□ -1.76
ELAVL1-201ENST00000407627 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.03□□□□□ -1.76
ELAVL1-201ENST00000407627 LCE1DQ5T752 114 aa4□□□□□ -1.77
ELAVL1-201ENST00000407627 LCE1BQ5T7P3 118 aa3.98□□□□□ -1.77
ELAVL1-201ENST00000407627 KRTAP2-3P0C7H8 128 aa3.97□□□□□ -1.77
ELAVL1-201ENST00000407627 KRTAP2-4Q9BYR9 128 aa3.97□□□□□ -1.77
ELAVL1-201ENST00000407627 SYNE2Q8WXH0 6885 aaKnown RBP3.97□□□□□ -1.77
ELAVL1-201ENST00000407627 MUC2Q02817 5179 aa3.95□□□□□ -1.78
ELAVL1-201ENST00000407627 KRTAP2-1Q9BYU5 128 aa3.93□□□□□ -1.78
ELAVL1-201ENST00000407627 LCE5AQ5TCM9 118 aa3.91□□□□□ -1.78
ELAVL1-201ENST00000407627 PRM1P04553 51 aa3.91□□□□□ -1.78
ELAVL1-201ENST00000407627 LCE4AQ5TA78 99 aa3.86□□□□□ -1.79
ELAVL1-201ENST00000407627 KRTAP4-9Q9BYQ8 210 aa3.84□□□□□ -1.79
ELAVL1-201ENST00000407627 KRTAP2-2Q9BYT5 123 aa3.83□□□□□ -1.8
ELAVL1-201ENST00000407627 KRTAP6-1Q3LI64 71 aa3.83□□□□□ -1.8
ELAVL1-201ENST00000407627 KRTAP9-4Q9BYQ2 154 aa3.8□□□□□ -1.8
ELAVL1-201ENST00000407627 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.81
ELAVL1-201ENST00000407627 KRTAP9-6A8MVA2 160 aa3.75□□□□□ -1.81
ELAVL1-201ENST00000407627 USH2AO75445 5202 aa3.68□□□□□ -1.82
ELAVL1-201ENST00000407627 SYNE1Q8NF91 8797 aaKnown RBP3.63□□□□□ -1.83
ELAVL1-201ENST00000407627 KRTAP5-9P26371 169 aa3.55□□□□□ -1.84
ELAVL1-201ENST00000407627 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
ELAVL1-201ENST00000407627 NEBP20929 6669 aa3.47□□□□□ -1.85
ELAVL1-201ENST00000407627 SSPOA2VEC9 5147 aa3.47□□□□□ -1.85
ELAVL1-201ENST00000407627 MACF1Q9UPN3 7388 aaKnown RBP3.46□□□□□ -1.86
ELAVL1-201ENST00000407627 LCE1CQ5T751 118 aa3.37□□□□□ -1.87
ELAVL1-201ENST00000407627 LCE1EQ5T753 118 aa3.37□□□□□ -1.87
ELAVL1-201ENST00000407627 LCE1FQ5T754 118 aa3.37□□□□□ -1.87
ELAVL1-201ENST00000407627 KMT2DO14686 5537 aa3.37□□□□□ -1.87
ELAVL1-201ENST00000407627 FCGBPQ9Y6R7 5405 aaPredicted RBP3.35□□□□□ -1.87
ELAVL1-201ENST00000407627 KRTAP9-9Q9BYP9 154 aa3.31□□□□□ -1.88
ELAVL1-201ENST00000407627 KRTAP4-6Q9BYQ5 205 aa3.28□□□□□ -1.88
ELAVL1-201ENST00000407627 KRTAP20-2Q3LI61 65 aa3.26□□□□□ -1.89
ELAVL1-201ENST00000407627 DSTQ03001 7570 aaKnown RBP3.14□□□□□ -1.91
ELAVL1-201ENST00000407627 MUC12Q9UKN1 5478 aa3.12□□□□□ -1.91
ELAVL1-201ENST00000407627 KRTAP5-4Q6L8H1 288 aa3.1□□□□□ -1.91
ELAVL1-201ENST00000407627 MDN1Q9NU22 5596 aa2.99□□□□□ -1.93
ELAVL1-201ENST00000407627 KRTAP5-5Q701N2 237 aaPredicted RBP2.94□□□□□ -1.94
ELAVL1-201ENST00000407627 KRTAP4-11Q9BYQ6 195 aa2.91□□□□□ -1.94
ELAVL1-201ENST00000407627 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
ELAVL1-201ENST00000407627 KRTAP4-2Q9BYR5 136 aa2.81□□□□□ -1.96
ELAVL1-201ENST00000407627 KRTAP4-4Q9BYR3 166 aa2.78□□□□□ -1.96
ELAVL1-201ENST00000407627 GPR98Q8WXG9 6306 aa2.76□□□□□ -1.97
ELAVL1-201ENST00000407627 MUC19Q7Z5P9 8384 aa2.76□□□□□ -1.97
ELAVL1-201ENST00000407627 KRTAP5-3Q6L8H2 238 aa2.69□□□□□ -1.98
ELAVL1-201ENST00000407627 MUC5ACP98088 5654 aa2.48□□□□□ -2.01
ELAVL1-201ENST00000407627 KRTAP5-8O75690 187 aa2.47□□□□□ -2.01
ELAVL1-201ENST00000407627 HMCN1Q96RW7 5635 aa2.44□□□□□ -2.02
ELAVL1-201ENST00000407627 KRTAP5-2Q701N4 177 aa2.44□□□□□ -2.02
ELAVL1-201ENST00000407627 AHNAK2Q8IVF2 5795 aa2.44□□□□□ -2.02
ELAVL1-201ENST00000407627 KRTAP5-10Q6L8G5 202 aa2.25□□□□□ -2.05
ELAVL1-201ENST00000407627 MUC5BQ9HC84 5762 aaPredicted RBP2.18□□□□□ -2.06
ELAVL1-201ENST00000407627 PHGR1C9JFL3 82 aa2.16□□□□□ -2.06
ELAVL1-201ENST00000407627 KRTAP5-1Q6L8H4 278 aa2.14□□□□□ -2.07
ELAVL1-201ENST00000407627 KRTAP5-11Q6L8G4 156 aa2.14□□□□□ -2.07
ELAVL1-201ENST00000407627 AHNAKQ09666 5890 aaKnown RBP2.03□□□□□ -2.08
ELAVL1-201ENST00000407627 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
ELAVL1-201ENST00000407627 KRTAP5-7Q6L8G8 165 aa1.92□□□□□ -2.1
ELAVL1-201ENST00000407627 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.91□□□□□ -2.1
ELAVL1-201ENST00000407627 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
ELAVL1-201ENST00000407627 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms