RNA–Protein interactions for RNA: ENST00000405141.5

NCOA1-204, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NCOA1, Length 7,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-204ENST00000405141 HMCN2Q8NDA2 5059 aa3.01□□□□□ -1.93
NCOA1-204ENST00000405141 PRM1P04553 51 aa2.95□□□□□ -1.94
NCOA1-204ENST00000405141 MT1MQ8N339 61 aa2.94□□□□□ -1.94
NCOA1-204ENST00000405141 SYNE2Q8WXH0 6885 aaKnown RBP2.91□□□□□ -1.94
NCOA1-204ENST00000405141 FAT4Q6V0I7 4981 aa2.9□□□□□ -1.94
NCOA1-204ENST00000405141 LCE2AQ5TA79 106 aaPredicted RBP2.9□□□□□ -1.95
NCOA1-204ENST00000405141 KRTAP9-2Q9BYQ4 174 aa2.9□□□□□ -1.95
NCOA1-204ENST00000405141 UBR4Q5T4S7 5183 aa2.88□□□□□ -1.95
NCOA1-204ENST00000405141 KRTAP4-9Q9BYQ8 210 aa2.88□□□□□ -1.95
NCOA1-204ENST00000405141 LCE2DQ5TA82 110 aaPredicted RBP2.87□□□□□ -1.95
NCOA1-204ENST00000405141 KRTAP19-7Q3SYF9 63 aa2.84□□□□□ -1.95
NCOA1-204ENST00000405141 KRTAP19-6Q3LI70 58 aa2.83□□□□□ -1.96
NCOA1-204ENST00000405141 KRTAP2-3P0C7H8 128 aa2.82□□□□□ -1.96
NCOA1-204ENST00000405141 KRTAP2-4Q9BYR9 128 aa2.82□□□□□ -1.96
NCOA1-204ENST00000405141 KRTAP2-1Q9BYU5 128 aa2.82□□□□□ -1.96
NCOA1-204ENST00000405141 MT4P47944 62 aa2.8□□□□□ -1.96
NCOA1-204ENST00000405141 RNF213Q63HN8 5207 aa2.79□□□□□ -1.96
NCOA1-204ENST00000405141 MT3P25713 68 aa2.77□□□□□ -1.97
NCOA1-204ENST00000405141 KRTAP9-6A8MVA2 160 aa2.77□□□□□ -1.97
NCOA1-204ENST00000405141 KMT2DO14686 5537 aa2.76□□□□□ -1.97
NCOA1-204ENST00000405141 KRTAP9-6A0A140TA67 174 aa2.72□□□□□ -1.97
NCOA1-204ENST00000405141 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
NCOA1-204ENST00000405141 MT1AP04731 61 aa2.69□□□□□ -1.98
NCOA1-204ENST00000405141 LCE1DQ5T752 114 aa2.69□□□□□ -1.98
NCOA1-204ENST00000405141 KRTAP6-1Q3LI64 71 aa2.65□□□□□ -1.99
NCOA1-204ENST00000405141 KRTAP6-2Q3LI66 62 aa2.62□□□□□ -1.99
NCOA1-204ENST00000405141 KRTAP9-7A8MTY7 169 aa2.61□□□□□ -1.99
NCOA1-204ENST00000405141 DSTQ03001 7570 aaKnown RBP2.55□□□□□ -2
NCOA1-204ENST00000405141 USH2AO75445 5202 aa2.54□□□□□ -2
NCOA1-204ENST00000405141 KRTAP9-4Q9BYQ2 154 aa2.53□□□□□ -2
NCOA1-204ENST00000405141 LCE5AQ5TCM9 118 aa2.51□□□□□ -2.01
NCOA1-204ENST00000405141 SYNE1Q8NF91 8797 aaKnown RBP2.5□□□□□ -2.01
NCOA1-204ENST00000405141 FCGBPQ9Y6R7 5405 aaPredicted RBP2.49□□□□□ -2.01
NCOA1-204ENST00000405141 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.48□□□□□ -2.01
NCOA1-204ENST00000405141 LCE1AQ5T7P2 110 aa2.48□□□□□ -2.01
NCOA1-204ENST00000405141 KRTAP6-3Q3LI67 103 aa2.47□□□□□ -2.01
NCOA1-204ENST00000405141 KRTAP20-1Q3LI63 56 aa2.43□□□□□ -2.02
NCOA1-204ENST00000405141 MACF1Q9UPN3 7388 aaKnown RBP2.43□□□□□ -2.02
NCOA1-204ENST00000405141 MUC12Q9UKN1 5478 aa2.35□□□□□ -2.03
NCOA1-204ENST00000405141 OBSCNQ5VST9 7968 aa2.34□□□□□ -2.03
NCOA1-204ENST00000405141 KRTAP2-2Q9BYT5 123 aa2.29□□□□□ -2.04
NCOA1-204ENST00000405141 KRTAP5-9P26371 169 aa2.29□□□□□ -2.04
NCOA1-204ENST00000405141 LCE4AQ5TA78 99 aa2.27□□□□□ -2.05
NCOA1-204ENST00000405141 SSPOA2VEC9 5147 aa2.26□□□□□ -2.05
NCOA1-204ENST00000405141 LCE1CQ5T751 118 aa2.22□□□□□ -2.05
NCOA1-204ENST00000405141 LCE1EQ5T753 118 aa2.22□□□□□ -2.05
NCOA1-204ENST00000405141 LCE1FQ5T754 118 aa2.22□□□□□ -2.05
NCOA1-204ENST00000405141 KRTAP4-11Q9BYQ6 195 aa2.21□□□□□ -2.06
NCOA1-204ENST00000405141 KRTAP4-6Q9BYQ5 205 aa2.2□□□□□ -2.06
NCOA1-204ENST00000405141 NEBP20929 6669 aa2.13□□□□□ -2.07
NCOA1-204ENST00000405141 KRTAP5-5Q701N2 237 aaPredicted RBP2.12□□□□□ -2.07
NCOA1-204ENST00000405141 KRTAP20-2Q3LI61 65 aa2.04□□□□□ -2.08
NCOA1-204ENST00000405141 KRTAP4-4Q9BYR3 166 aa2.01□□□□□ -2.09
NCOA1-204ENST00000405141 KRTAP9-9Q9BYP9 154 aa1.97□□□□□ -2.09
NCOA1-204ENST00000405141 MDN1Q9NU22 5596 aa1.94□□□□□ -2.1
NCOA1-204ENST00000405141 KRTAP4-12Q9BQ66 201 aa1.91□□□□□ -2.1
NCOA1-204ENST00000405141 KRTAP4-2Q9BYR5 136 aa1.91□□□□□ -2.1
NCOA1-204ENST00000405141 KRTAP5-4Q6L8H1 288 aa1.86□□□□□ -2.11
NCOA1-204ENST00000405141 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
NCOA1-204ENST00000405141 MUC5ACP98088 5654 aa1.71□□□□□ -2.14
NCOA1-204ENST00000405141 KRTAP5-2Q701N4 177 aa1.66□□□□□ -2.14
NCOA1-204ENST00000405141 GPR98Q8WXG9 6306 aa1.66□□□□□ -2.14
NCOA1-204ENST00000405141 KRTAP5-3Q6L8H2 238 aa1.65□□□□□ -2.15
NCOA1-204ENST00000405141 KRTAP5-10Q6L8G5 202 aa1.59□□□□□ -2.15
NCOA1-204ENST00000405141 KRTAP5-8O75690 187 aa1.57□□□□□ -2.16
NCOA1-204ENST00000405141 HMCN1Q96RW7 5635 aa1.56□□□□□ -2.16
NCOA1-204ENST00000405141 AHNAK2Q8IVF2 5795 aa1.55□□□□□ -2.16
NCOA1-204ENST00000405141 KRTAP5-7Q6L8G8 165 aa1.55□□□□□ -2.16
NCOA1-204ENST00000405141 KRTAP5-1Q6L8H4 278 aa1.42□□□□□ -2.18
NCOA1-204ENST00000405141 KRTAP21-2Q3LI59 83 aa1.35□□□□□ -2.19
NCOA1-204ENST00000405141 AHNAKQ09666 5890 aaKnown RBP1.34□□□□□ -2.19
NCOA1-204ENST00000405141 MUC5BQ9HC84 5762 aaPredicted RBP1.34□□□□□ -2.2
NCOA1-204ENST00000405141 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.32□□□□□ -2.2
NCOA1-204ENST00000405141 PHGR1C9JFL3 82 aa1.32□□□□□ -2.2
NCOA1-204ENST00000405141 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
NCOA1-204ENST00000405141 KRTAP5-11Q6L8G4 156 aa1.3□□□□□ -2.2
NCOA1-204ENST00000405141 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 101 ms