RNA–Protein interactions for RNA: ENST00000401669.6

NRXN1-204, Transcript of neurexin 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene NRXN1, Length 5,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-204ENST00000401669 PCLOQ9Y6V0 5065 aa4.9□□□□□ -1.62
NRXN1-204ENST00000401669 FLGP20930 4061 aaPredicted RBP4.9□□□□□ -1.63
NRXN1-204ENST00000401669 LOC100996750A0A140TA64 210 aa4.85□□□□□ -1.63
NRXN1-204ENST00000401669 KRTAP19-6Q3LI70 58 aa4.83□□□□□ -1.64
NRXN1-204ENST00000401669 EPPK1P58107 5090 aaKnown RBP4.82□□□□□ -1.64
NRXN1-204ENST00000401669 LCE5AQ5TCM9 118 aa4.8□□□□□ -1.64
NRXN1-204ENST00000401669 KRTAP4-3Q9BYR4 195 aa4.79□□□□□ -1.64
NRXN1-204ENST00000401669 SYNE1Q8NF91 8797 aaKnown RBP4.78□□□□□ -1.64
NRXN1-204ENST00000401669 KRTAP9-6A0A140TA67 174 aa4.75□□□□□ -1.65
NRXN1-204ENST00000401669 KRTAP20-1Q3LI63 56 aa4.72□□□□□ -1.65
NRXN1-204ENST00000401669 ABCA13Q86UQ4 5058 aa4.71□□□□□ -1.66
NRXN1-204ENST00000401669 MT1AP04731 61 aa4.65□□□□□ -1.66
NRXN1-204ENST00000401669 LCE2AQ5TA79 106 aaPredicted RBP4.58□□□□□ -1.68
NRXN1-204ENST00000401669 KRTAP4-9Q9BYQ8 210 aa4.54□□□□□ -1.68
NRXN1-204ENST00000401669 KRTAP9-7A8MTY7 169 aa4.53□□□□□ -1.68
NRXN1-204ENST00000401669 KRTAP2-3P0C7H8 128 aa4.52□□□□□ -1.69
NRXN1-204ENST00000401669 KRTAP2-4Q9BYR9 128 aa4.52□□□□□ -1.69
NRXN1-204ENST00000401669 KRTAP2-1Q9BYU5 128 aa4.52□□□□□ -1.69
NRXN1-204ENST00000401669 FAT4Q6V0I7 4981 aa4.51□□□□□ -1.69
NRXN1-204ENST00000401669 LCE1CQ5T751 118 aa4.48□□□□□ -1.69
NRXN1-204ENST00000401669 LCE1EQ5T753 118 aa4.48□□□□□ -1.69
NRXN1-204ENST00000401669 LCE1FQ5T754 118 aa4.48□□□□□ -1.69
NRXN1-204ENST00000401669 LCE1AQ5T7P2 110 aa4.48□□□□□ -1.69
NRXN1-204ENST00000401669 RNF213Q63HN8 5207 aa4.47□□□□□ -1.69
NRXN1-204ENST00000401669 KRTAP19-7Q3SYF9 63 aa4.47□□□□□ -1.69
NRXN1-204ENST00000401669 FSIP2Q5CZC0 6907 aa4.44□□□□□ -1.7
NRXN1-204ENST00000401669 HMCN2Q8NDA2 5059 aa4.44□□□□□ -1.7
NRXN1-204ENST00000401669 KRTAP6-3Q3LI67 103 aa4.38□□□□□ -1.71
NRXN1-204ENST00000401669 SYNE2Q8WXH0 6885 aaKnown RBP4.37□□□□□ -1.71
NRXN1-204ENST00000401669 KRTAP6-2Q3LI66 62 aa4.36□□□□□ -1.71
NRXN1-204ENST00000401669 LCE4AQ5TA78 99 aa4.34□□□□□ -1.72
NRXN1-204ENST00000401669 OBSCNQ5VST9 7968 aa4.32□□□□□ -1.72
NRXN1-204ENST00000401669 KRTAP6-1Q3LI64 71 aa4.29□□□□□ -1.72
NRXN1-204ENST00000401669 KRTAP2-2Q9BYT5 123 aa4.28□□□□□ -1.72
NRXN1-204ENST00000401669 KRTAP9-4Q9BYQ2 154 aa4.28□□□□□ -1.73
NRXN1-204ENST00000401669 MUC2Q02817 5179 aa4.24□□□□□ -1.73
NRXN1-204ENST00000401669 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.22□□□□□ -1.73
NRXN1-204ENST00000401669 UBR4Q5T4S7 5183 aa4.21□□□□□ -1.74
NRXN1-204ENST00000401669 KRTAP9-6A8MVA2 160 aa4.04□□□□□ -1.76
NRXN1-204ENST00000401669 KRTAP9-9Q9BYP9 154 aa4.02□□□□□ -1.77
NRXN1-204ENST00000401669 MACF1Q9UPN3 7388 aaKnown RBP3.87□□□□□ -1.79
NRXN1-204ENST00000401669 DSTQ03001 7570 aaKnown RBP3.79□□□□□ -1.8
NRXN1-204ENST00000401669 USH2AO75445 5202 aa3.75□□□□□ -1.81
NRXN1-204ENST00000401669 FCGBPQ9Y6R7 5405 aaPredicted RBP3.65□□□□□ -1.82
NRXN1-204ENST00000401669 KRTAP4-11Q9BYQ6 195 aa3.64□□□□□ -1.83
NRXN1-204ENST00000401669 KRTAP5-9P26371 169 aa3.59□□□□□ -1.83
NRXN1-204ENST00000401669 KRTAP20-2Q3LI61 65 aa3.58□□□□□ -1.84
NRXN1-204ENST00000401669 NEBP20929 6669 aa3.57□□□□□ -1.84
NRXN1-204ENST00000401669 KMT2DO14686 5537 aa3.56□□□□□ -1.84
NRXN1-204ENST00000401669 MUC19Q7Z5P9 8384 aa3.54□□□□□ -1.84
NRXN1-204ENST00000401669 KRTAP4-6Q9BYQ5 205 aa3.54□□□□□ -1.84
NRXN1-204ENST00000401669 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
NRXN1-204ENST00000401669 SSPOA2VEC9 5147 aa3.47□□□□□ -1.85
NRXN1-204ENST00000401669 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
NRXN1-204ENST00000401669 KRTAP4-12Q9BQ66 201 aa3.43□□□□□ -1.86
NRXN1-204ENST00000401669 KRTAP4-2Q9BYR5 136 aa3.43□□□□□ -1.86
NRXN1-204ENST00000401669 MDN1Q9NU22 5596 aa3.29□□□□□ -1.88
NRXN1-204ENST00000401669 MUC12Q9UKN1 5478 aa3.27□□□□□ -1.89
NRXN1-204ENST00000401669 KRTAP5-4Q6L8H1 288 aa3.18□□□□□ -1.9
NRXN1-204ENST00000401669 KRTAP5-5Q701N2 237 aaPredicted RBP3.1□□□□□ -1.91
NRXN1-204ENST00000401669 KRTAP5-3Q6L8H2 238 aa2.83□□□□□ -1.96
NRXN1-204ENST00000401669 MUC5ACP98088 5654 aa2.76□□□□□ -1.97
NRXN1-204ENST00000401669 AHNAK2Q8IVF2 5795 aa2.66□□□□□ -1.98
NRXN1-204ENST00000401669 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
NRXN1-204ENST00000401669 HMCN1Q96RW7 5635 aa2.62□□□□□ -1.99
NRXN1-204ENST00000401669 KRTAP5-8O75690 187 aa2.59□□□□□ -1.99
NRXN1-204ENST00000401669 KRTAP5-2Q701N4 177 aa2.55□□□□□ -2
NRXN1-204ENST00000401669 KRTAP5-10Q6L8G5 202 aa2.42□□□□□ -2.02
NRXN1-204ENST00000401669 MUC5BQ9HC84 5762 aaPredicted RBP2.3□□□□□ -2.04
NRXN1-204ENST00000401669 AHNAKQ09666 5890 aaKnown RBP2.23□□□□□ -2.05
NRXN1-204ENST00000401669 KRTAP5-1Q6L8H4 278 aa2.21□□□□□ -2.06
NRXN1-204ENST00000401669 KRTAP5-11Q6L8G4 156 aa2.21□□□□□ -2.06
NRXN1-204ENST00000401669 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
NRXN1-204ENST00000401669 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.04□□□□□ -2.08
NRXN1-204ENST00000401669 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
NRXN1-204ENST00000401669 KRTAP5-7Q6L8G8 165 aa1.85□□□□□ -2.11
NRXN1-204ENST00000401669 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 8.1 ms