RNA–Protein interactions for RNA: ENST00000399788.6

KDM5A-201, Transcript of lysine demethylase 5A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM5A, Length 10,763 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-201ENST00000399788 KRTAP2-4Q9BYR9 128 aa2.4□□□□□ -2.02
KDM5A-201ENST00000399788 HSPG2P98160 4391 aa2.4□□□□□ -2.03
KDM5A-201ENST00000399788 SYNE1Q8NF91 8797 aaKnown RBP2.37□□□□□ -2.03
KDM5A-201ENST00000399788 MT1AP04731 61 aa2.36□□□□□ -2.03
KDM5A-201ENST00000399788 LPAP08519 4548 aa2.36□□□□□ -2.03
KDM5A-201ENST00000399788 KRTAP4-9Q9BYQ8 210 aa2.33□□□□□ -2.04
KDM5A-201ENST00000399788 KRTAP6-3Q3LI67 103 aa2.32□□□□□ -2.04
KDM5A-201ENST00000399788 LCE4AQ5TA78 99 aa2.31□□□□□ -2.04
KDM5A-201ENST00000399788 KRTAP2-1Q9BYU5 128 aa2.31□□□□□ -2.04
KDM5A-201ENST00000399788 LRP2P98164 4655 aa2.31□□□□□ -2.04
KDM5A-201ENST00000399788 KRTAP2-2Q9BYT5 123 aa2.3□□□□□ -2.04
KDM5A-201ENST00000399788 KRTAP19-2Q3LHN2 52 aa2.29□□□□□ -2.04
KDM5A-201ENST00000399788 HERC2O95714 4834 aa2.29□□□□□ -2.04
KDM5A-201ENST00000399788 SYNE2Q8WXH0 6885 aaKnown RBP2.29□□□□□ -2.04
KDM5A-201ENST00000399788 KRTAP6-2Q3LI66 62 aa2.26□□□□□ -2.05
KDM5A-201ENST00000399788 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.26□□□□□ -2.05
KDM5A-201ENST00000399788 LCE2AQ5TA79 106 aaPredicted RBP2.24□□□□□ -2.05
KDM5A-201ENST00000399788 PCLOQ9Y6V0 5065 aa2.23□□□□□ -2.05
KDM5A-201ENST00000399788 KRTAP19-7Q3SYF9 63 aa2.23□□□□□ -2.05
KDM5A-201ENST00000399788 HERC1Q15751 4861 aa2.22□□□□□ -2.05
KDM5A-201ENST00000399788 TNXBP22105 4242 aa2.21□□□□□ -2.06
KDM5A-201ENST00000399788 EPPK1P58107 5090 aaKnown RBP2.2□□□□□ -2.06
KDM5A-201ENST00000399788 KRTAP9-9Q9BYP9 154 aa2.2□□□□□ -2.06
KDM5A-201ENST00000399788 RYR2Q92736 4967 aa2.2□□□□□ -2.06
KDM5A-201ENST00000399788 KRTAP9-4Q9BYQ2 154 aa2.2□□□□□ -2.06
KDM5A-201ENST00000399788 MUC17Q685J3 4493 aa2.19□□□□□ -2.06
KDM5A-201ENST00000399788 KIAA1109Q2LD37 5005 aa2.19□□□□□ -2.06
KDM5A-201ENST00000399788 HYDINQ4G0P3 5121 aa2.17□□□□□ -2.06
KDM5A-201ENST00000399788 KRTAP6-1Q3LI64 71 aa2.17□□□□□ -2.06
KDM5A-201ENST00000399788 KMT2CQ8NEZ4 4911 aaKnown RBP2.17□□□□□ -2.06
KDM5A-201ENST00000399788 FSIP2Q5CZC0 6907 aa2.15□□□□□ -2.07
KDM5A-201ENST00000399788 OBSCNQ5VST9 7968 aa2.13□□□□□ -2.07
KDM5A-201ENST00000399788 BIRC6Q9NR09 4857 aa2.09□□□□□ -2.08
KDM5A-201ENST00000399788 MUC2Q02817 5179 aa2.03□□□□□ -2.08
KDM5A-201ENST00000399788 ABCA13Q86UQ4 5058 aa2□□□□□ -2.09
KDM5A-201ENST00000399788 HMCN2Q8NDA2 5059 aa1.99□□□□□ -2.09
KDM5A-201ENST00000399788 KRTAP9-6A8MVA2 160 aa1.93□□□□□ -2.1
KDM5A-201ENST00000399788 MACF1Q9UPN3 7388 aaKnown RBP1.92□□□□□ -2.1
KDM5A-201ENST00000399788 KRTAP20-2Q3LI61 65 aa1.92□□□□□ -2.1
KDM5A-201ENST00000399788 DSTQ03001 7570 aaKnown RBP1.9□□□□□ -2.11
KDM5A-201ENST00000399788 RNF213Q63HN8 5207 aa1.89□□□□□ -2.11
KDM5A-201ENST00000399788 UBR4Q5T4S7 5183 aa1.88□□□□□ -2.11
KDM5A-201ENST00000399788 FAT4Q6V0I7 4981 aa1.88□□□□□ -2.11
KDM5A-201ENST00000399788 KRTAP4-11Q9BYQ6 195 aa1.86□□□□□ -2.11
KDM5A-201ENST00000399788 KRTAP4-6Q9BYQ5 205 aa1.84□□□□□ -2.11
KDM5A-201ENST00000399788 KRTAP4-12Q9BQ66 201 aa1.81□□□□□ -2.12
KDM5A-201ENST00000399788 KRTAP4-2Q9BYR5 136 aa1.81□□□□□ -2.12
KDM5A-201ENST00000399788 KRTAP4-4Q9BYR3 166 aa1.8□□□□□ -2.12
KDM5A-201ENST00000399788 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
KDM5A-201ENST00000399788 KRTAP5-9P26371 169 aa1.75□□□□□ -2.13
KDM5A-201ENST00000399788 NEBP20929 6669 aa1.75□□□□□ -2.13
KDM5A-201ENST00000399788 FCGBPQ9Y6R7 5405 aaPredicted RBP1.72□□□□□ -2.13
KDM5A-201ENST00000399788 GPR98Q8WXG9 6306 aa1.72□□□□□ -2.13
KDM5A-201ENST00000399788 KRTAP5-4Q6L8H1 288 aa1.66□□□□□ -2.14
KDM5A-201ENST00000399788 USH2AO75445 5202 aa1.61□□□□□ -2.15
KDM5A-201ENST00000399788 KMT2DO14686 5537 aa1.58□□□□□ -2.16
KDM5A-201ENST00000399788 KRTAP5-5Q701N2 237 aaPredicted RBP1.53□□□□□ -2.16
KDM5A-201ENST00000399788 KRTAP5-3Q6L8H2 238 aa1.5□□□□□ -2.17
KDM5A-201ENST00000399788 SSPOA2VEC9 5147 aa1.49□□□□□ -2.17
KDM5A-201ENST00000399788 MDN1Q9NU22 5596 aa1.49□□□□□ -2.17
KDM5A-201ENST00000399788 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
KDM5A-201ENST00000399788 KRTAP5-8O75690 187 aa1.36□□□□□ -2.19
KDM5A-201ENST00000399788 MUC12Q9UKN1 5478 aa1.35□□□□□ -2.19
KDM5A-201ENST00000399788 MUC5ACP98088 5654 aa1.33□□□□□ -2.2
KDM5A-201ENST00000399788 HMCN1Q96RW7 5635 aa1.19□□□□□ -2.22
KDM5A-201ENST00000399788 KRTAP5-10Q6L8G5 202 aa1.16□□□□□ -2.22
KDM5A-201ENST00000399788 AHNAK2Q8IVF2 5795 aa1.16□□□□□ -2.22
KDM5A-201ENST00000399788 MUC5BQ9HC84 5762 aaPredicted RBP1.14□□□□□ -2.23
KDM5A-201ENST00000399788 KRTAP5-2Q701N4 177 aa1.12□□□□□ -2.23
KDM5A-201ENST00000399788 KRTAP5-11Q6L8G4 156 aa1.1□□□□□ -2.23
KDM5A-201ENST00000399788 KRTAP5-1Q6L8H4 278 aa1.07□□□□□ -2.24
KDM5A-201ENST00000399788 AHNAKQ09666 5890 aaKnown RBP1.06□□□□□ -2.24
KDM5A-201ENST00000399788 KRTAP21-1Q3LI58 79 aa0.99□□□□□ -2.25
KDM5A-201ENST00000399788 KRTAP21-2Q3LI59 83 aa0.96□□□□□ -2.26
KDM5A-201ENST00000399788 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.91□□□□□ -2.26
KDM5A-201ENST00000399788 KRTAP5-7Q6L8G8 165 aa0.9□□□□□ -2.27
KDM5A-201ENST00000399788 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 116.5 ms