RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 FLGP20930 4061 aaPredicted RBP4.26□□□□□ -1.73
ITSN1-208ENST00000399349 MT1EP04732 61 aa4.23□□□□□ -1.73
ITSN1-208ENST00000399349 OBSCNQ5VST9 7968 aa4.22□□□□□ -1.73
ITSN1-208ENST00000399349 LOC100996750A0A140TA64 210 aa4.16□□□□□ -1.74
ITSN1-208ENST00000399349 RNF213Q63HN8 5207 aa4.14□□□□□ -1.75
ITSN1-208ENST00000399349 KRTAP4-3Q9BYR4 195 aa4.14□□□□□ -1.75
ITSN1-208ENST00000399349 FAT4Q6V0I7 4981 aa4.12□□□□□ -1.75
ITSN1-208ENST00000399349 MT1MQ8N339 61 aa4.1□□□□□ -1.75
ITSN1-208ENST00000399349 MT4P47944 62 aa4.06□□□□□ -1.76
ITSN1-208ENST00000399349 PRM1P04553 51 aa4.01□□□□□ -1.77
ITSN1-208ENST00000399349 MT3P25713 68 aa3.99□□□□□ -1.77
ITSN1-208ENST00000399349 SYNE2Q8WXH0 6885 aaKnown RBP3.99□□□□□ -1.77
ITSN1-208ENST00000399349 KRTAP2-3P0C7H8 128 aa3.98□□□□□ -1.77
ITSN1-208ENST00000399349 KRTAP2-4Q9BYR9 128 aa3.98□□□□□ -1.77
ITSN1-208ENST00000399349 KRTAP2-1Q9BYU5 128 aa3.98□□□□□ -1.77
ITSN1-208ENST00000399349 KRTAP19-6Q3LI70 58 aa3.97□□□□□ -1.77
ITSN1-208ENST00000399349 KRTAP9-6A8MVA2 160 aa3.96□□□□□ -1.78
ITSN1-208ENST00000399349 LCE1BQ5T7P3 118 aa3.94□□□□□ -1.78
ITSN1-208ENST00000399349 KRTAP19-7Q3SYF9 63 aa3.94□□□□□ -1.78
ITSN1-208ENST00000399349 KRTAP9-2Q9BYQ4 174 aa3.93□□□□□ -1.78
ITSN1-208ENST00000399349 KRTAP4-9Q9BYQ8 210 aa3.92□□□□□ -1.78
ITSN1-208ENST00000399349 LCE1DQ5T752 114 aa3.92□□□□□ -1.78
ITSN1-208ENST00000399349 FCGBPQ9Y6R7 5405 aaPredicted RBP3.88□□□□□ -1.79
ITSN1-208ENST00000399349 DSTQ03001 7570 aaKnown RBP3.84□□□□□ -1.79
ITSN1-208ENST00000399349 LCE2AQ5TA79 106 aaPredicted RBP3.83□□□□□ -1.8
ITSN1-208ENST00000399349 MT1AP04731 61 aa3.77□□□□□ -1.81
ITSN1-208ENST00000399349 USH2AO75445 5202 aa3.75□□□□□ -1.81
ITSN1-208ENST00000399349 MACF1Q9UPN3 7388 aaKnown RBP3.74□□□□□ -1.81
ITSN1-208ENST00000399349 KMT2DO14686 5537 aa3.66□□□□□ -1.82
ITSN1-208ENST00000399349 KRTAP6-1Q3LI64 71 aa3.63□□□□□ -1.83
ITSN1-208ENST00000399349 LCE5AQ5TCM9 118 aa3.63□□□□□ -1.83
ITSN1-208ENST00000399349 KRTAP9-6A0A140TA67 174 aa3.63□□□□□ -1.83
ITSN1-208ENST00000399349 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.84
ITSN1-208ENST00000399349 KRTAP9-7A8MTY7 169 aa3.55□□□□□ -1.84
ITSN1-208ENST00000399349 LCE1AQ5T7P2 110 aa3.48□□□□□ -1.85
ITSN1-208ENST00000399349 MUC19Q7Z5P9 8384 aa3.47□□□□□ -1.85
ITSN1-208ENST00000399349 KRTAP20-1Q3LI63 56 aa3.47□□□□□ -1.85
ITSN1-208ENST00000399349 KRTAP9-4Q9BYQ2 154 aa3.46□□□□□ -1.86
ITSN1-208ENST00000399349 KRTAP6-3Q3LI67 103 aa3.41□□□□□ -1.86
ITSN1-208ENST00000399349 SSPOA2VEC9 5147 aa3.38□□□□□ -1.87
ITSN1-208ENST00000399349 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.38□□□□□ -1.87
ITSN1-208ENST00000399349 MUC12Q9UKN1 5478 aa3.37□□□□□ -1.87
ITSN1-208ENST00000399349 LCE1CQ5T751 118 aa3.3□□□□□ -1.88
ITSN1-208ENST00000399349 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
ITSN1-208ENST00000399349 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
ITSN1-208ENST00000399349 LCE4AQ5TA78 99 aa3.29□□□□□ -1.88
ITSN1-208ENST00000399349 MDN1Q9NU22 5596 aa3.29□□□□□ -1.88
ITSN1-208ENST00000399349 KRTAP2-2Q9BYT5 123 aa3.27□□□□□ -1.89
ITSN1-208ENST00000399349 NEBP20929 6669 aa3.12□□□□□ -1.91
ITSN1-208ENST00000399349 KRTAP5-5Q701N2 237 aaPredicted RBP3.03□□□□□ -1.93
ITSN1-208ENST00000399349 KRTAP4-6Q9BYQ5 205 aa3.02□□□□□ -1.93
ITSN1-208ENST00000399349 KRTAP4-11Q9BYQ6 195 aa3.01□□□□□ -1.93
ITSN1-208ENST00000399349 GPR98Q8WXG9 6306 aa2.99□□□□□ -1.93
ITSN1-208ENST00000399349 KRTAP9-9Q9BYP9 154 aa2.93□□□□□ -1.94
ITSN1-208ENST00000399349 KRTAP5-9P26371 169 aa2.92□□□□□ -1.94
ITSN1-208ENST00000399349 KRTAP20-2Q3LI61 65 aa2.87□□□□□ -1.95
ITSN1-208ENST00000399349 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.96
ITSN1-208ENST00000399349 KRTAP4-12Q9BQ66 201 aa2.77□□□□□ -1.97
ITSN1-208ENST00000399349 KRTAP4-2Q9BYR5 136 aa2.77□□□□□ -1.97
ITSN1-208ENST00000399349 MUC5ACP98088 5654 aa2.74□□□□□ -1.97
ITSN1-208ENST00000399349 HMCN1Q96RW7 5635 aa2.66□□□□□ -1.98
ITSN1-208ENST00000399349 KRTAP5-4Q6L8H1 288 aa2.54□□□□□ -2
ITSN1-208ENST00000399349 AHNAK2Q8IVF2 5795 aa2.42□□□□□ -2.02
ITSN1-208ENST00000399349 KRTAP5-3Q6L8H2 238 aa2.31□□□□□ -2.04
ITSN1-208ENST00000399349 KRTAP5-10Q6L8G5 202 aa2.27□□□□□ -2.05
ITSN1-208ENST00000399349 KRTAP5-2Q701N4 177 aa2.26□□□□□ -2.05
ITSN1-208ENST00000399349 KRTAP5-8O75690 187 aa2.17□□□□□ -2.06
ITSN1-208ENST00000399349 AHNAKQ09666 5890 aaKnown RBP2.06□□□□□ -2.08
ITSN1-208ENST00000399349 MUC5BQ9HC84 5762 aaPredicted RBP2□□□□□ -2.09
ITSN1-208ENST00000399349 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
ITSN1-208ENST00000399349 KRTAP5-1Q6L8H4 278 aa1.94□□□□□ -2.1
ITSN1-208ENST00000399349 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
ITSN1-208ENST00000399349 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
ITSN1-208ENST00000399349 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
ITSN1-208ENST00000399349 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.79□□□□□ -2.12
ITSN1-208ENST00000399349 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
ITSN1-208ENST00000399349 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 76.7 ms