RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 FLGP20930 4061 aaPredicted RBP5.11□□□□□ -1.59
PCDHA12-201ENST00000398631 MT3P25713 68 aa5.05□□□□□ -1.6
PCDHA12-201ENST00000398631 TNXBP22105 4242 aa5.04□□□□□ -1.6
PCDHA12-201ENST00000398631 LCE2AQ5TA79 106 aaPredicted RBP5.03□□□□□ -1.6
PCDHA12-201ENST00000398631 RNF213Q63HN8 5207 aa5.02□□□□□ -1.61
PCDHA12-201ENST00000398631 FSIP2Q5CZC0 6907 aa5.01□□□□□ -1.61
PCDHA12-201ENST00000398631 MT4P47944 62 aa4.99□□□□□ -1.61
PCDHA12-201ENST00000398631 FAT4Q6V0I7 4981 aa4.98□□□□□ -1.61
PCDHA12-201ENST00000398631 KRTAP4-3Q9BYR4 195 aa4.92□□□□□ -1.62
PCDHA12-201ENST00000398631 LOC100996750A0A140TA64 210 aa4.92□□□□□ -1.62
PCDHA12-201ENST00000398631 KRTAP19-7Q3SYF9 63 aa4.89□□□□□ -1.63
PCDHA12-201ENST00000398631 KRTAP9-6A0A140TA67 174 aa4.86□□□□□ -1.63
PCDHA12-201ENST00000398631 MUC2Q02817 5179 aa4.84□□□□□ -1.63
PCDHA12-201ENST00000398631 HMCN2Q8NDA2 5059 aa4.81□□□□□ -1.64
PCDHA12-201ENST00000398631 MT1AP04731 61 aa4.79□□□□□ -1.64
PCDHA12-201ENST00000398631 PRM1P04553 51 aa4.77□□□□□ -1.65
PCDHA12-201ENST00000398631 LCE1BQ5T7P3 118 aa4.77□□□□□ -1.65
PCDHA12-201ENST00000398631 LCE1DQ5T752 114 aa4.76□□□□□ -1.65
PCDHA12-201ENST00000398631 OBSCNQ5VST9 7968 aa4.7□□□□□ -1.66
PCDHA12-201ENST00000398631 LCE1AQ5T7P2 110 aa4.66□□□□□ -1.66
PCDHA12-201ENST00000398631 KRTAP2-3P0C7H8 128 aa4.65□□□□□ -1.67
PCDHA12-201ENST00000398631 KRTAP2-4Q9BYR9 128 aa4.65□□□□□ -1.67
PCDHA12-201ENST00000398631 KRTAP2-1Q9BYU5 128 aa4.65□□□□□ -1.67
PCDHA12-201ENST00000398631 SYNE2Q8WXH0 6885 aaKnown RBP4.62□□□□□ -1.67
PCDHA12-201ENST00000398631 KRTAP9-7A8MTY7 169 aa4.61□□□□□ -1.67
PCDHA12-201ENST00000398631 KRTAP20-1Q3LI63 56 aa4.61□□□□□ -1.67
PCDHA12-201ENST00000398631 KRTAP6-3Q3LI67 103 aa4.6□□□□□ -1.67
PCDHA12-201ENST00000398631 KRTAP4-9Q9BYQ8 210 aa4.55□□□□□ -1.68
PCDHA12-201ENST00000398631 LCE5AQ5TCM9 118 aa4.48□□□□□ -1.69
PCDHA12-201ENST00000398631 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.45□□□□□ -1.7
PCDHA12-201ENST00000398631 KRTAP6-1Q3LI64 71 aa4.44□□□□□ -1.7
PCDHA12-201ENST00000398631 KRTAP6-2Q3LI66 62 aa4.4□□□□□ -1.71
PCDHA12-201ENST00000398631 LCE4AQ5TA78 99 aa4.4□□□□□ -1.71
PCDHA12-201ENST00000398631 KRTAP9-6A8MVA2 160 aa4.39□□□□□ -1.71
PCDHA12-201ENST00000398631 KRTAP9-4Q9BYQ2 154 aa4.37□□□□□ -1.71
PCDHA12-201ENST00000398631 KRTAP2-2Q9BYT5 123 aa4.35□□□□□ -1.71
PCDHA12-201ENST00000398631 USH2AO75445 5202 aa4.33□□□□□ -1.72
PCDHA12-201ENST00000398631 FCGBPQ9Y6R7 5405 aaPredicted RBP4.29□□□□□ -1.72
PCDHA12-201ENST00000398631 DSTQ03001 7570 aaKnown RBP4.25□□□□□ -1.73
PCDHA12-201ENST00000398631 MACF1Q9UPN3 7388 aaKnown RBP4.18□□□□□ -1.74
PCDHA12-201ENST00000398631 KMT2DO14686 5537 aa4.07□□□□□ -1.76
PCDHA12-201ENST00000398631 LCE1CQ5T751 118 aa4.04□□□□□ -1.76
PCDHA12-201ENST00000398631 LCE1EQ5T753 118 aa4.04□□□□□ -1.76
PCDHA12-201ENST00000398631 LCE1FQ5T754 118 aa4.04□□□□□ -1.76
PCDHA12-201ENST00000398631 NEBP20929 6669 aa3.92□□□□□ -1.78
PCDHA12-201ENST00000398631 KRTAP5-9P26371 169 aa3.92□□□□□ -1.78
PCDHA12-201ENST00000398631 MDN1Q9NU22 5596 aa3.89□□□□□ -1.79
PCDHA12-201ENST00000398631 MUC19Q7Z5P9 8384 aa3.85□□□□□ -1.79
PCDHA12-201ENST00000398631 KRTAP9-9Q9BYP9 154 aa3.82□□□□□ -1.8
PCDHA12-201ENST00000398631 SSPOA2VEC9 5147 aa3.8□□□□□ -1.8
PCDHA12-201ENST00000398631 GPR98Q8WXG9 6306 aa3.79□□□□□ -1.8
PCDHA12-201ENST00000398631 MUC12Q9UKN1 5478 aa3.75□□□□□ -1.81
PCDHA12-201ENST00000398631 KRTAP4-6Q9BYQ5 205 aa3.72□□□□□ -1.81
PCDHA12-201ENST00000398631 KRTAP20-2Q3LI61 65 aa3.69□□□□□ -1.82
PCDHA12-201ENST00000398631 KRTAP4-11Q9BYQ6 195 aa3.49□□□□□ -1.85
PCDHA12-201ENST00000398631 KRTAP5-4Q6L8H1 288 aa3.41□□□□□ -1.86
PCDHA12-201ENST00000398631 KRTAP4-4Q9BYR3 166 aa3.29□□□□□ -1.88
PCDHA12-201ENST00000398631 KRTAP4-12Q9BQ66 201 aa3.28□□□□□ -1.88
PCDHA12-201ENST00000398631 KRTAP4-2Q9BYR5 136 aa3.28□□□□□ -1.88
PCDHA12-201ENST00000398631 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
PCDHA12-201ENST00000398631 MUC5ACP98088 5654 aa3.17□□□□□ -1.9
PCDHA12-201ENST00000398631 HMCN1Q96RW7 5635 aa3.09□□□□□ -1.91
PCDHA12-201ENST00000398631 AHNAK2Q8IVF2 5795 aa3.05□□□□□ -1.92
PCDHA12-201ENST00000398631 KRTAP5-3Q6L8H2 238 aa3.04□□□□□ -1.92
PCDHA12-201ENST00000398631 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
PCDHA12-201ENST00000398631 KRTAP5-2Q701N4 177 aa2.67□□□□□ -1.98
PCDHA12-201ENST00000398631 KRTAP5-10Q6L8G5 202 aa2.63□□□□□ -1.99
PCDHA12-201ENST00000398631 AHNAKQ09666 5890 aaKnown RBP2.55□□□□□ -2
PCDHA12-201ENST00000398631 MUC5BQ9HC84 5762 aaPredicted RBP2.54□□□□□ -2
PCDHA12-201ENST00000398631 PHGR1C9JFL3 82 aa2.48□□□□□ -2.01
PCDHA12-201ENST00000398631 KRTAP5-11Q6L8G4 156 aa2.44□□□□□ -2.02
PCDHA12-201ENST00000398631 KRTAP5-1Q6L8H4 278 aa2.35□□□□□ -2.03
PCDHA12-201ENST00000398631 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
PCDHA12-201ENST00000398631 KRTAP5-7Q6L8G8 165 aa2.2□□□□□ -2.06
PCDHA12-201ENST00000398631 KRTAP21-1Q3LI58 79 aa2.17□□□□□ -2.06
PCDHA12-201ENST00000398631 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.13□□□□□ -2.07
PCDHA12-201ENST00000398631 MUC16Q8WXI7 14507 aa1.49□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 85.2 ms