RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 SYNE1Q8NF91 8797 aaKnown RBP4.59□□□□□ -1.68
PCDHGA11-201ENST00000398587 FSIP2Q5CZC0 6907 aa4.56□□□□□ -1.68
PCDHGA11-201ENST00000398587 MT1MQ8N339 61 aa4.56□□□□□ -1.68
PCDHGA11-201ENST00000398587 LCE3DQ9BYE3 92 aa4.53□□□□□ -1.68
PCDHGA11-201ENST00000398587 KRTAP19-7Q3SYF9 63 aa4.52□□□□□ -1.69
PCDHGA11-201ENST00000398587 LCE2DQ5TA82 110 aaPredicted RBP4.5□□□□□ -1.69
PCDHGA11-201ENST00000398587 MUC2Q02817 5179 aa4.48□□□□□ -1.69
PCDHGA11-201ENST00000398587 KRTAP9-2Q9BYQ4 174 aa4.47□□□□□ -1.69
PCDHGA11-201ENST00000398587 LCE3EQ5T5B0 92 aa4.47□□□□□ -1.69
PCDHGA11-201ENST00000398587 KRTAP4-3Q9BYR4 195 aa4.4□□□□□ -1.71
PCDHGA11-201ENST00000398587 LOC100996750A0A140TA64 210 aa4.37□□□□□ -1.71
PCDHGA11-201ENST00000398587 MT3P25713 68 aa4.3□□□□□ -1.72
PCDHGA11-201ENST00000398587 MT1AP04731 61 aa4.22□□□□□ -1.73
PCDHGA11-201ENST00000398587 KRTAP2-3P0C7H8 128 aa4.22□□□□□ -1.73
PCDHGA11-201ENST00000398587 KRTAP2-4Q9BYR9 128 aa4.22□□□□□ -1.73
PCDHGA11-201ENST00000398587 KRTAP2-1Q9BYU5 128 aa4.22□□□□□ -1.73
PCDHGA11-201ENST00000398587 KRTAP9-6A0A140TA67 174 aa4.15□□□□□ -1.74
PCDHGA11-201ENST00000398587 MT4P47944 62 aa4.15□□□□□ -1.74
PCDHGA11-201ENST00000398587 KRTAP9-6A8MVA2 160 aa4.14□□□□□ -1.75
PCDHGA11-201ENST00000398587 LCE1AQ5T7P2 110 aa4.14□□□□□ -1.75
PCDHGA11-201ENST00000398587 LCE5AQ5TCM9 118 aa4.1□□□□□ -1.75
PCDHGA11-201ENST00000398587 USH2AO75445 5202 aa4.09□□□□□ -1.76
PCDHGA11-201ENST00000398587 OBSCNQ5VST9 7968 aa4.09□□□□□ -1.76
PCDHGA11-201ENST00000398587 KRTAP6-3Q3LI67 103 aa4.04□□□□□ -1.76
PCDHGA11-201ENST00000398587 PRM1P04553 51 aa4.04□□□□□ -1.76
PCDHGA11-201ENST00000398587 KRTAP4-9Q9BYQ8 210 aa4.01□□□□□ -1.77
PCDHGA11-201ENST00000398587 KRTAP6-1Q3LI64 71 aa3.98□□□□□ -1.77
PCDHGA11-201ENST00000398587 FCGBPQ9Y6R7 5405 aaPredicted RBP3.97□□□□□ -1.77
PCDHGA11-201ENST00000398587 SYNE2Q8WXH0 6885 aaKnown RBP3.97□□□□□ -1.77
PCDHGA11-201ENST00000398587 KRTAP9-7A8MTY7 169 aa3.94□□□□□ -1.78
PCDHGA11-201ENST00000398587 LCE1DQ5T752 114 aa3.93□□□□□ -1.78
PCDHGA11-201ENST00000398587 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.92□□□□□ -1.78
PCDHGA11-201ENST00000398587 LCE1BQ5T7P3 118 aa3.9□□□□□ -1.78
PCDHGA11-201ENST00000398587 DSTQ03001 7570 aaKnown RBP3.88□□□□□ -1.79
PCDHGA11-201ENST00000398587 KRTAP9-4Q9BYQ2 154 aa3.87□□□□□ -1.79
PCDHGA11-201ENST00000398587 KRTAP6-2Q3LI66 62 aa3.85□□□□□ -1.79
PCDHGA11-201ENST00000398587 KRTAP20-1Q3LI63 56 aa3.83□□□□□ -1.8
PCDHGA11-201ENST00000398587 KMT2DO14686 5537 aa3.82□□□□□ -1.8
PCDHGA11-201ENST00000398587 LCE4AQ5TA78 99 aa3.79□□□□□ -1.8
PCDHGA11-201ENST00000398587 SSPOA2VEC9 5147 aa3.73□□□□□ -1.81
PCDHGA11-201ENST00000398587 KRTAP2-2Q9BYT5 123 aa3.72□□□□□ -1.81
PCDHGA11-201ENST00000398587 MUC12Q9UKN1 5478 aa3.67□□□□□ -1.82
PCDHGA11-201ENST00000398587 KRTAP5-9P26371 169 aa3.67□□□□□ -1.82
PCDHGA11-201ENST00000398587 MACF1Q9UPN3 7388 aaKnown RBP3.67□□□□□ -1.82
PCDHGA11-201ENST00000398587 MDN1Q9NU22 5596 aa3.45□□□□□ -1.86
PCDHGA11-201ENST00000398587 NEBP20929 6669 aa3.42□□□□□ -1.86
PCDHGA11-201ENST00000398587 KRTAP4-6Q9BYQ5 205 aa3.33□□□□□ -1.88
PCDHGA11-201ENST00000398587 KRTAP20-2Q3LI61 65 aa3.3□□□□□ -1.88
PCDHGA11-201ENST00000398587 MUC19Q7Z5P9 8384 aa3.21□□□□□ -1.9
PCDHGA11-201ENST00000398587 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
PCDHGA11-201ENST00000398587 LCE1EQ5T753 118 aa3.18□□□□□ -1.9
PCDHGA11-201ENST00000398587 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
PCDHGA11-201ENST00000398587 KRTAP5-5Q701N2 237 aaPredicted RBP3.16□□□□□ -1.9
PCDHGA11-201ENST00000398587 KRTAP9-9Q9BYP9 154 aa3.12□□□□□ -1.91
PCDHGA11-201ENST00000398587 KRTAP5-4Q6L8H1 288 aa3.08□□□□□ -1.92
PCDHGA11-201ENST00000398587 GPR98Q8WXG9 6306 aa3.04□□□□□ -1.92
PCDHGA11-201ENST00000398587 KRTAP4-11Q9BYQ6 195 aa2.99□□□□□ -1.93
PCDHGA11-201ENST00000398587 MUC5ACP98088 5654 aa2.84□□□□□ -1.95
PCDHGA11-201ENST00000398587 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
PCDHGA11-201ENST00000398587 KRTAP4-12Q9BQ66 201 aa2.75□□□□□ -1.97
PCDHGA11-201ENST00000398587 KRTAP4-2Q9BYR5 136 aa2.75□□□□□ -1.97
PCDHGA11-201ENST00000398587 HMCN1Q96RW7 5635 aa2.74□□□□□ -1.97
PCDHGA11-201ENST00000398587 KRTAP5-3Q6L8H2 238 aa2.7□□□□□ -1.98
PCDHGA11-201ENST00000398587 AHNAK2Q8IVF2 5795 aa2.65□□□□□ -1.99
PCDHGA11-201ENST00000398587 KRTAP5-2Q701N4 177 aa2.63□□□□□ -1.99
PCDHGA11-201ENST00000398587 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
PCDHGA11-201ENST00000398587 KRTAP5-10Q6L8G5 202 aa2.48□□□□□ -2.01
PCDHGA11-201ENST00000398587 KRTAP5-1Q6L8H4 278 aa2.28□□□□□ -2.04
PCDHGA11-201ENST00000398587 MUC5BQ9HC84 5762 aaPredicted RBP2.28□□□□□ -2.04
PCDHGA11-201ENST00000398587 KRTAP5-11Q6L8G4 156 aa2.26□□□□□ -2.05
PCDHGA11-201ENST00000398587 AHNAKQ09666 5890 aaKnown RBP2.22□□□□□ -2.05
PCDHGA11-201ENST00000398587 KRTAP21-2Q3LI59 83 aa2.17□□□□□ -2.06
PCDHGA11-201ENST00000398587 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.11□□□□□ -2.07
PCDHGA11-201ENST00000398587 PHGR1C9JFL3 82 aa1.98□□□□□ -2.09
PCDHGA11-201ENST00000398587 KRTAP5-7Q6L8G8 165 aa1.93□□□□□ -2.1
PCDHGA11-201ENST00000398587 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
PCDHGA11-201ENST00000398587 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 32.9 ms