RNA–Protein interactions for RNA: ENST00000397795.6

TRPM1-202, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRPM1, Length 5,687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-202ENST00000397795 RNF213Q63HN8 5207 aa2.73□□□□□ -1.97
TRPM1-202ENST00000397795 MUC2Q02817 5179 aa2.71□□□□□ -1.98
TRPM1-202ENST00000397795 SYNE1Q8NF91 8797 aaKnown RBP2.71□□□□□ -1.98
TRPM1-202ENST00000397795 MT1EP04732 61 aa2.71□□□□□ -1.98
TRPM1-202ENST00000397795 HMCN2Q8NDA2 5059 aa2.69□□□□□ -1.98
TRPM1-202ENST00000397795 KRTAP19-3Q7Z4W3 81 aa2.69□□□□□ -1.98
TRPM1-202ENST00000397795 UBR4Q5T4S7 5183 aa2.69□□□□□ -1.98
TRPM1-202ENST00000397795 FAT4Q6V0I7 4981 aa2.68□□□□□ -1.98
TRPM1-202ENST00000397795 LCE1BQ5T7P3 118 aa2.68□□□□□ -1.98
TRPM1-202ENST00000397795 KRTAP19-7Q3SYF9 63 aa2.67□□□□□ -1.98
TRPM1-202ENST00000397795 LCE2DQ5TA82 110 aaPredicted RBP2.63□□□□□ -1.99
TRPM1-202ENST00000397795 LOC100996750A0A140TA64 210 aa2.63□□□□□ -1.99
TRPM1-202ENST00000397795 LCE1DQ5T752 114 aa2.61□□□□□ -1.99
TRPM1-202ENST00000397795 FSIP2Q5CZC0 6907 aa2.59□□□□□ -1.99
TRPM1-202ENST00000397795 MT1AP04731 61 aa2.59□□□□□ -1.99
TRPM1-202ENST00000397795 LCE2AQ5TA79 106 aaPredicted RBP2.56□□□□□ -2
TRPM1-202ENST00000397795 MT1MQ8N339 61 aa2.56□□□□□ -2
TRPM1-202ENST00000397795 KRTAP4-9Q9BYQ8 210 aa2.55□□□□□ -2
TRPM1-202ENST00000397795 KRTAP19-6Q3LI70 58 aa2.54□□□□□ -2
TRPM1-202ENST00000397795 KRTAP9-2Q9BYQ4 174 aa2.54□□□□□ -2
TRPM1-202ENST00000397795 KRTAP4-3Q9BYR4 195 aa2.54□□□□□ -2
TRPM1-202ENST00000397795 KRTAP9-7A8MTY7 169 aa2.53□□□□□ -2
TRPM1-202ENST00000397795 KRTAP6-2Q3LI66 62 aa2.52□□□□□ -2.01
TRPM1-202ENST00000397795 KRTAP9-6A0A140TA67 174 aa2.5□□□□□ -2.01
TRPM1-202ENST00000397795 LCE5AQ5TCM9 118 aa2.5□□□□□ -2.01
TRPM1-202ENST00000397795 LCE1AQ5T7P2 110 aa2.48□□□□□ -2.01
TRPM1-202ENST00000397795 LCE4AQ5TA78 99 aa2.47□□□□□ -2.01
TRPM1-202ENST00000397795 MT4P47944 62 aa2.46□□□□□ -2.02
TRPM1-202ENST00000397795 OBSCNQ5VST9 7968 aa2.43□□□□□ -2.02
TRPM1-202ENST00000397795 KRTAP6-3Q3LI67 103 aa2.43□□□□□ -2.02
TRPM1-202ENST00000397795 KRTAP2-2Q9BYT5 123 aa2.42□□□□□ -2.02
TRPM1-202ENST00000397795 LCE1CQ5T751 118 aa2.39□□□□□ -2.03
TRPM1-202ENST00000397795 LCE1EQ5T753 118 aa2.39□□□□□ -2.03
TRPM1-202ENST00000397795 LCE1FQ5T754 118 aa2.39□□□□□ -2.03
TRPM1-202ENST00000397795 KRTAP20-1Q3LI63 56 aa2.37□□□□□ -2.03
TRPM1-202ENST00000397795 USH2AO75445 5202 aa2.35□□□□□ -2.03
TRPM1-202ENST00000397795 KRTAP6-1Q3LI64 71 aa2.34□□□□□ -2.04
TRPM1-202ENST00000397795 KRTAP5-5Q701N2 237 aaPredicted RBP2.29□□□□□ -2.04
TRPM1-202ENST00000397795 FCGBPQ9Y6R7 5405 aaPredicted RBP2.28□□□□□ -2.04
TRPM1-202ENST00000397795 KMT2DO14686 5537 aa2.27□□□□□ -2.05
TRPM1-202ENST00000397795 KRTAP9-4Q9BYQ2 154 aa2.26□□□□□ -2.05
TRPM1-202ENST00000397795 DSTQ03001 7570 aaKnown RBP2.22□□□□□ -2.05
TRPM1-202ENST00000397795 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.21□□□□□ -2.06
TRPM1-202ENST00000397795 SSPOA2VEC9 5147 aa2.18□□□□□ -2.06
TRPM1-202ENST00000397795 KRTAP4-11Q9BYQ6 195 aa2.14□□□□□ -2.07
TRPM1-202ENST00000397795 MUC12Q9UKN1 5478 aa2.12□□□□□ -2.07
TRPM1-202ENST00000397795 SYNE2Q8WXH0 6885 aaKnown RBP2.1□□□□□ -2.07
TRPM1-202ENST00000397795 MACF1Q9UPN3 7388 aaKnown RBP2.07□□□□□ -2.08
TRPM1-202ENST00000397795 MUC19Q7Z5P9 8384 aa2.02□□□□□ -2.09
TRPM1-202ENST00000397795 KRTAP5-9P26371 169 aa1.97□□□□□ -2.09
TRPM1-202ENST00000397795 KRTAP20-2Q3LI61 65 aa1.94□□□□□ -2.1
TRPM1-202ENST00000397795 MDN1Q9NU22 5596 aa1.93□□□□□ -2.1
TRPM1-202ENST00000397795 KRTAP9-9Q9BYP9 154 aa1.92□□□□□ -2.1
TRPM1-202ENST00000397795 NEBP20929 6669 aa1.87□□□□□ -2.11
TRPM1-202ENST00000397795 GPR98Q8WXG9 6306 aa1.81□□□□□ -2.12
TRPM1-202ENST00000397795 KRTAP4-6Q9BYQ5 205 aa1.75□□□□□ -2.13
TRPM1-202ENST00000397795 KRTAP4-4Q9BYR3 166 aa1.74□□□□□ -2.13
TRPM1-202ENST00000397795 KRTAP5-4Q6L8H1 288 aa1.74□□□□□ -2.13
TRPM1-202ENST00000397795 KRTAP5-2Q701N4 177 aa1.72□□□□□ -2.13
TRPM1-202ENST00000397795 KRTAP5-10Q6L8G5 202 aa1.66□□□□□ -2.14
TRPM1-202ENST00000397795 KRTAP4-12Q9BQ66 201 aa1.62□□□□□ -2.15
TRPM1-202ENST00000397795 KRTAP4-2Q9BYR5 136 aa1.62□□□□□ -2.15
TRPM1-202ENST00000397795 MUC5ACP98088 5654 aa1.59□□□□□ -2.16
TRPM1-202ENST00000397795 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
TRPM1-202ENST00000397795 HMCN1Q96RW7 5635 aa1.52□□□□□ -2.17
TRPM1-202ENST00000397795 KRTAP5-3Q6L8H2 238 aa1.51□□□□□ -2.17
TRPM1-202ENST00000397795 AHNAK2Q8IVF2 5795 aa1.5□□□□□ -2.17
TRPM1-202ENST00000397795 KRTAP5-1Q6L8H4 278 aa1.42□□□□□ -2.18
TRPM1-202ENST00000397795 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.35□□□□□ -2.19
TRPM1-202ENST00000397795 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
TRPM1-202ENST00000397795 KRTAP5-8O75690 187 aa1.31□□□□□ -2.2
TRPM1-202ENST00000397795 AHNAKQ09666 5890 aaKnown RBP1.23□□□□□ -2.21
TRPM1-202ENST00000397795 PHGR1C9JFL3 82 aa1.22□□□□□ -2.21
TRPM1-202ENST00000397795 KRTAP5-11Q6L8G4 156 aa1.21□□□□□ -2.22
TRPM1-202ENST00000397795 MUC5BQ9HC84 5762 aaPredicted RBP1.19□□□□□ -2.22
TRPM1-202ENST00000397795 KRTAP5-7Q6L8G8 165 aa1.13□□□□□ -2.23
TRPM1-202ENST00000397795 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 173.3 ms