RNA–Protein interactions for RNA: ENST00000397224.8

FOXRED2-204, Transcript of FAD dependent oxidoreductase domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXRED2, Length 4,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED2-204ENST00000397224 LCE3DQ9BYE3 92 aa5.03□□□□□ -1.6
FOXRED2-204ENST00000397224 LCE3EQ5T5B0 92 aa4.95□□□□□ -1.62
FOXRED2-204ENST00000397224 KRTAP19-6Q3LI70 58 aa4.94□□□□□ -1.62
FOXRED2-204ENST00000397224 MT1MQ8N339 61 aa4.94□□□□□ -1.62
FOXRED2-204ENST00000397224 MUC2Q02817 5179 aa4.92□□□□□ -1.62
FOXRED2-204ENST00000397224 LOC100996750A0A140TA64 210 aa4.9□□□□□ -1.63
FOXRED2-204ENST00000397224 LCE2AQ5TA79 106 aaPredicted RBP4.89□□□□□ -1.63
FOXRED2-204ENST00000397224 KRTAP9-2Q9BYQ4 174 aa4.89□□□□□ -1.63
FOXRED2-204ENST00000397224 KRTAP4-3Q9BYR4 195 aa4.89□□□□□ -1.63
FOXRED2-204ENST00000397224 KRTAP19-7Q3SYF9 63 aa4.88□□□□□ -1.63
FOXRED2-204ENST00000397224 LCE2DQ5TA82 110 aaPredicted RBP4.67□□□□□ -1.66
FOXRED2-204ENST00000397224 MT3P25713 68 aa4.66□□□□□ -1.66
FOXRED2-204ENST00000397224 OBSCNQ5VST9 7968 aa4.64□□□□□ -1.67
FOXRED2-204ENST00000397224 KRTAP2-3P0C7H8 128 aa4.62□□□□□ -1.67
FOXRED2-204ENST00000397224 KRTAP2-4Q9BYR9 128 aa4.62□□□□□ -1.67
FOXRED2-204ENST00000397224 KRTAP2-1Q9BYU5 128 aa4.62□□□□□ -1.67
FOXRED2-204ENST00000397224 PRM1P04553 51 aa4.59□□□□□ -1.67
FOXRED2-204ENST00000397224 KRTAP9-6A0A140TA67 174 aa4.58□□□□□ -1.68
FOXRED2-204ENST00000397224 KRTAP9-6A8MVA2 160 aa4.58□□□□□ -1.68
FOXRED2-204ENST00000397224 MT4P47944 62 aa4.57□□□□□ -1.68
FOXRED2-204ENST00000397224 SYNE2Q8WXH0 6885 aaKnown RBP4.57□□□□□ -1.68
FOXRED2-204ENST00000397224 MT1AP04731 61 aa4.55□□□□□ -1.68
FOXRED2-204ENST00000397224 KRTAP4-9Q9BYQ8 210 aa4.55□□□□□ -1.68
FOXRED2-204ENST00000397224 FCGBPQ9Y6R7 5405 aaPredicted RBP4.45□□□□□ -1.7
FOXRED2-204ENST00000397224 DSTQ03001 7570 aaKnown RBP4.39□□□□□ -1.71
FOXRED2-204ENST00000397224 USH2AO75445 5202 aa4.39□□□□□ -1.71
FOXRED2-204ENST00000397224 LCE1DQ5T752 114 aa4.37□□□□□ -1.71
FOXRED2-204ENST00000397224 LCE5AQ5TCM9 118 aa4.37□□□□□ -1.71
FOXRED2-204ENST00000397224 LCE1BQ5T7P3 118 aa4.36□□□□□ -1.71
FOXRED2-204ENST00000397224 KRTAP6-1Q3LI64 71 aa4.36□□□□□ -1.71
FOXRED2-204ENST00000397224 KRTAP9-7A8MTY7 169 aa4.35□□□□□ -1.71
FOXRED2-204ENST00000397224 KMT2DO14686 5537 aa4.31□□□□□ -1.72
FOXRED2-204ENST00000397224 LCE1AQ5T7P2 110 aa4.3□□□□□ -1.72
FOXRED2-204ENST00000397224 MACF1Q9UPN3 7388 aaKnown RBP4.25□□□□□ -1.73
FOXRED2-204ENST00000397224 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.23□□□□□ -1.73
FOXRED2-204ENST00000397224 KRTAP6-2Q3LI66 62 aa4.22□□□□□ -1.73
FOXRED2-204ENST00000397224 KRTAP6-3Q3LI67 103 aa4.21□□□□□ -1.74
FOXRED2-204ENST00000397224 KRTAP20-1Q3LI63 56 aa4.2□□□□□ -1.74
FOXRED2-204ENST00000397224 KRTAP9-4Q9BYQ2 154 aa4.19□□□□□ -1.74
FOXRED2-204ENST00000397224 MUC12Q9UKN1 5478 aa4.03□□□□□ -1.76
FOXRED2-204ENST00000397224 LCE4AQ5TA78 99 aa3.97□□□□□ -1.77
FOXRED2-204ENST00000397224 SSPOA2VEC9 5147 aa3.96□□□□□ -1.77
FOXRED2-204ENST00000397224 KRTAP2-2Q9BYT5 123 aa3.96□□□□□ -1.78
FOXRED2-204ENST00000397224 MDN1Q9NU22 5596 aa3.91□□□□□ -1.78
FOXRED2-204ENST00000397224 NEBP20929 6669 aa3.79□□□□□ -1.8
FOXRED2-204ENST00000397224 KRTAP5-9P26371 169 aa3.78□□□□□ -1.8
FOXRED2-204ENST00000397224 MUC19Q7Z5P9 8384 aa3.64□□□□□ -1.83
FOXRED2-204ENST00000397224 KRTAP4-6Q9BYQ5 205 aa3.61□□□□□ -1.83
FOXRED2-204ENST00000397224 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
FOXRED2-204ENST00000397224 LCE1EQ5T753 118 aa3.6□□□□□ -1.83
FOXRED2-204ENST00000397224 LCE1FQ5T754 118 aa3.6□□□□□ -1.83
FOXRED2-204ENST00000397224 GPR98Q8WXG9 6306 aa3.54□□□□□ -1.84
FOXRED2-204ENST00000397224 KRTAP20-2Q3LI61 65 aa3.51□□□□□ -1.85
FOXRED2-204ENST00000397224 KRTAP4-11Q9BYQ6 195 aa3.42□□□□□ -1.86
FOXRED2-204ENST00000397224 KRTAP5-5Q701N2 237 aaPredicted RBP3.39□□□□□ -1.87
FOXRED2-204ENST00000397224 KRTAP9-9Q9BYP9 154 aa3.38□□□□□ -1.87
FOXRED2-204ENST00000397224 KRTAP5-4Q6L8H1 288 aa3.2□□□□□ -1.9
FOXRED2-204ENST00000397224 MUC5ACP98088 5654 aa3.16□□□□□ -1.9
FOXRED2-204ENST00000397224 KRTAP4-4Q9BYR3 166 aa3.16□□□□□ -1.9
FOXRED2-204ENST00000397224 KRTAP4-12Q9BQ66 201 aa3.08□□□□□ -1.92
FOXRED2-204ENST00000397224 KRTAP4-2Q9BYR5 136 aa3.08□□□□□ -1.92
FOXRED2-204ENST00000397224 HMCN1Q96RW7 5635 aa3.06□□□□□ -1.92
FOXRED2-204ENST00000397224 AHNAK2Q8IVF2 5795 aa2.9□□□□□ -1.94
FOXRED2-204ENST00000397224 KRTAP5-3Q6L8H2 238 aa2.89□□□□□ -1.95
FOXRED2-204ENST00000397224 KRTAP5-2Q701N4 177 aa2.7□□□□□ -1.98
FOXRED2-204ENST00000397224 KRTAP5-10Q6L8G5 202 aa2.69□□□□□ -1.98
FOXRED2-204ENST00000397224 KRTAP5-8O75690 187 aa2.65□□□□□ -1.98
FOXRED2-204ENST00000397224 AHNAKQ09666 5890 aaKnown RBP2.47□□□□□ -2.01
FOXRED2-204ENST00000397224 MUC5BQ9HC84 5762 aaPredicted RBP2.43□□□□□ -2.02
FOXRED2-204ENST00000397224 KRTAP5-1Q6L8H4 278 aa2.38□□□□□ -2.03
FOXRED2-204ENST00000397224 KRTAP5-11Q6L8G4 156 aa2.34□□□□□ -2.03
FOXRED2-204ENST00000397224 KRTAP21-2Q3LI59 83 aa2.33□□□□□ -2.04
FOXRED2-204ENST00000397224 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
FOXRED2-204ENST00000397224 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.07
FOXRED2-204ENST00000397224 KRTAP21-1Q3LI58 79 aa2.07□□□□□ -2.08
FOXRED2-204ENST00000397224 KRTAP5-7Q6L8G8 165 aa1.91□□□□□ -2.1
FOXRED2-204ENST00000397224 MUC16Q8WXI7 14507 aa1.38□□□□□ -2.19
Retrieved 77 of 20,778 RNA–protein pairs in 176.8 ms