RNA–Protein interactions for RNA: ENST00000396193.5

PDE1C-206, Transcript of phosphodiesterase 1C, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PDE1C, Length 5,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-206ENST00000396193 LOC100996750A0A140TA64 210 aa5.48□□□□□ -1.53
PDE1C-206ENST00000396193 KRTAP2-3P0C7H8 128 aa5.45□□□□□ -1.54
PDE1C-206ENST00000396193 KRTAP2-4Q9BYR9 128 aa5.45□□□□□ -1.54
PDE1C-206ENST00000396193 KRTAP2-1Q9BYU5 128 aa5.45□□□□□ -1.54
PDE1C-206ENST00000396193 KRTAP19-7Q3SYF9 63 aa5.43□□□□□ -1.54
PDE1C-206ENST00000396193 HMCN2Q8NDA2 5059 aa5.43□□□□□ -1.54
PDE1C-206ENST00000396193 KRTAP4-3Q9BYR4 195 aa5.42□□□□□ -1.54
PDE1C-206ENST00000396193 FAT4Q6V0I7 4981 aa5.35□□□□□ -1.55
PDE1C-206ENST00000396193 RNF213Q63HN8 5207 aa5.32□□□□□ -1.56
PDE1C-206ENST00000396193 KRTAP19-6Q3LI70 58 aa5.3□□□□□ -1.56
PDE1C-206ENST00000396193 MT3P25713 68 aa5.27□□□□□ -1.57
PDE1C-206ENST00000396193 KRTAP9-6A8MVA2 160 aa5.23□□□□□ -1.57
PDE1C-206ENST00000396193 FSIP2Q5CZC0 6907 aa5.19□□□□□ -1.58
PDE1C-206ENST00000396193 KRTAP4-9Q9BYQ8 210 aa5.17□□□□□ -1.58
PDE1C-206ENST00000396193 MT1AP04731 61 aa5.13□□□□□ -1.59
PDE1C-206ENST00000396193 OBSCNQ5VST9 7968 aa5.1□□□□□ -1.59
PDE1C-206ENST00000396193 LCE2AQ5TA79 106 aaPredicted RBP5.08□□□□□ -1.6
PDE1C-206ENST00000396193 MUC2Q02817 5179 aa5.08□□□□□ -1.6
PDE1C-206ENST00000396193 LCE2DQ5TA82 110 aaPredicted RBP5.07□□□□□ -1.6
PDE1C-206ENST00000396193 MT4P47944 62 aa4.93□□□□□ -1.62
PDE1C-206ENST00000396193 KRTAP6-1Q3LI64 71 aa4.88□□□□□ -1.63
PDE1C-206ENST00000396193 LCE1BQ5T7P3 118 aa4.88□□□□□ -1.63
PDE1C-206ENST00000396193 LCE1DQ5T752 114 aa4.87□□□□□ -1.63
PDE1C-206ENST00000396193 KRTAP6-2Q3LI66 62 aa4.85□□□□□ -1.63
PDE1C-206ENST00000396193 SYNE2Q8WXH0 6885 aaKnown RBP4.85□□□□□ -1.63
PDE1C-206ENST00000396193 FCGBPQ9Y6R7 5405 aaPredicted RBP4.84□□□□□ -1.63
PDE1C-206ENST00000396193 LCE5AQ5TCM9 118 aa4.78□□□□□ -1.64
PDE1C-206ENST00000396193 KRTAP9-7A8MTY7 169 aa4.78□□□□□ -1.64
PDE1C-206ENST00000396193 USH2AO75445 5202 aa4.72□□□□□ -1.65
PDE1C-206ENST00000396193 KRTAP9-2Q9BYQ4 174 aa4.71□□□□□ -1.66
PDE1C-206ENST00000396193 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
PDE1C-206ENST00000396193 LCE1AQ5T7P2 110 aa4.64□□□□□ -1.67
PDE1C-206ENST00000396193 DSTQ03001 7570 aaKnown RBP4.63□□□□□ -1.67
PDE1C-206ENST00000396193 KMT2DO14686 5537 aa4.55□□□□□ -1.68
PDE1C-206ENST00000396193 KRTAP2-2Q9BYT5 123 aa4.47□□□□□ -1.69
PDE1C-206ENST00000396193 KRTAP6-3Q3LI67 103 aa4.35□□□□□ -1.71
PDE1C-206ENST00000396193 LCE4AQ5TA78 99 aa4.28□□□□□ -1.72
PDE1C-206ENST00000396193 KRTAP9-6A0A140TA67 174 aa4.24□□□□□ -1.73
PDE1C-206ENST00000396193 KRTAP20-1Q3LI63 56 aa4.24□□□□□ -1.73
PDE1C-206ENST00000396193 MUC12Q9UKN1 5478 aa4.23□□□□□ -1.73
PDE1C-206ENST00000396193 SSPOA2VEC9 5147 aa4.19□□□□□ -1.74
PDE1C-206ENST00000396193 MUC19Q7Z5P9 8384 aa4.16□□□□□ -1.74
PDE1C-206ENST00000396193 MACF1Q9UPN3 7388 aaKnown RBP4.14□□□□□ -1.75
PDE1C-206ENST00000396193 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.12□□□□□ -1.75
PDE1C-206ENST00000396193 LCE1CQ5T751 118 aa4.09□□□□□ -1.76
PDE1C-206ENST00000396193 LCE1EQ5T753 118 aa4.09□□□□□ -1.76
PDE1C-206ENST00000396193 LCE1FQ5T754 118 aa4.09□□□□□ -1.76
PDE1C-206ENST00000396193 KRTAP4-11Q9BYQ6 195 aa4.04□□□□□ -1.76
PDE1C-206ENST00000396193 KRTAP5-5Q701N2 237 aaPredicted RBP3.96□□□□□ -1.78
PDE1C-206ENST00000396193 KRTAP5-9P26371 169 aa3.95□□□□□ -1.78
PDE1C-206ENST00000396193 MDN1Q9NU22 5596 aa3.86□□□□□ -1.79
PDE1C-206ENST00000396193 KRTAP4-6Q9BYQ5 205 aa3.83□□□□□ -1.8
PDE1C-206ENST00000396193 KRTAP20-2Q3LI61 65 aa3.77□□□□□ -1.81
PDE1C-206ENST00000396193 NEBP20929 6669 aa3.73□□□□□ -1.81
PDE1C-206ENST00000396193 KRTAP9-9Q9BYP9 154 aa3.72□□□□□ -1.81
PDE1C-206ENST00000396193 KRTAP4-4Q9BYR3 166 aa3.51□□□□□ -1.85
PDE1C-206ENST00000396193 GPR98Q8WXG9 6306 aa3.46□□□□□ -1.86
PDE1C-206ENST00000396193 KRTAP5-4Q6L8H1 288 aa3.41□□□□□ -1.86
PDE1C-206ENST00000396193 MUC5ACP98088 5654 aa3.35□□□□□ -1.87
PDE1C-206ENST00000396193 KRTAP4-12Q9BQ66 201 aa3.33□□□□□ -1.88
PDE1C-206ENST00000396193 KRTAP4-2Q9BYR5 136 aa3.33□□□□□ -1.88
PDE1C-206ENST00000396193 HMCN1Q96RW7 5635 aa3.22□□□□□ -1.89
PDE1C-206ENST00000396193 KRTAP5-10Q6L8G5 202 aa3.08□□□□□ -1.92
PDE1C-206ENST00000396193 KRTAP5-3Q6L8H2 238 aa2.98□□□□□ -1.93
PDE1C-206ENST00000396193 AHNAK2Q8IVF2 5795 aa2.94□□□□□ -1.94
PDE1C-206ENST00000396193 KRTAP5-2Q701N4 177 aa2.89□□□□□ -1.95
PDE1C-206ENST00000396193 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
PDE1C-206ENST00000396193 KRTAP5-1Q6L8H4 278 aa2.63□□□□□ -1.99
PDE1C-206ENST00000396193 MUC5BQ9HC84 5762 aaPredicted RBP2.62□□□□□ -1.99
PDE1C-206ENST00000396193 KRTAP21-2Q3LI59 83 aa2.58□□□□□ -2
PDE1C-206ENST00000396193 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
PDE1C-206ENST00000396193 KRTAP21-1Q3LI58 79 aa2.55□□□□□ -2
PDE1C-206ENST00000396193 AHNAKQ09666 5890 aaKnown RBP2.44□□□□□ -2.02
PDE1C-206ENST00000396193 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.37□□□□□ -2.03
PDE1C-206ENST00000396193 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
PDE1C-206ENST00000396193 KRTAP5-7Q6L8G8 165 aa2.04□□□□□ -2.08
PDE1C-206ENST00000396193 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 9.6 ms