RNA–Protein interactions for RNA: ENST00000395146.8

AFF1-202, Transcript of AF4/FMR2 family member 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene AFF1, Length 9,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-202ENST00000395146 ABCA13Q86UQ4 5058 aa3.24□□□□□ -1.89
AFF1-202ENST00000395146 KRTAP2-3P0C7H8 128 aa3.22□□□□□ -1.89
AFF1-202ENST00000395146 KRTAP2-4Q9BYR9 128 aa3.22□□□□□ -1.89
AFF1-202ENST00000395146 KRTAP2-1Q9BYU5 128 aa3.22□□□□□ -1.89
AFF1-202ENST00000395146 KRTAP19-7Q3SYF9 63 aa3.22□□□□□ -1.89
AFF1-202ENST00000395146 RNF213Q63HN8 5207 aa3.22□□□□□ -1.89
AFF1-202ENST00000395146 LCE2DQ5TA82 110 aaPredicted RBP3.19□□□□□ -1.9
AFF1-202ENST00000395146 KRTAP4-3Q9BYR4 195 aa3.18□□□□□ -1.9
AFF1-202ENST00000395146 MT1AP04731 61 aa3.16□□□□□ -1.9
AFF1-202ENST00000395146 FAT4Q6V0I7 4981 aa3.12□□□□□ -1.91
AFF1-202ENST00000395146 LCE2AQ5TA79 106 aaPredicted RBP3.09□□□□□ -1.91
AFF1-202ENST00000395146 UBR4Q5T4S7 5183 aa3.08□□□□□ -1.92
AFF1-202ENST00000395146 MT4P47944 62 aa3.07□□□□□ -1.92
AFF1-202ENST00000395146 HMCN2Q8NDA2 5059 aa3.06□□□□□ -1.92
AFF1-202ENST00000395146 LCE1DQ5T752 114 aa3.01□□□□□ -1.93
AFF1-202ENST00000395146 KRTAP4-9Q9BYQ8 210 aa3.01□□□□□ -1.93
AFF1-202ENST00000395146 KRTAP9-6A8MVA2 160 aa3□□□□□ -1.93
AFF1-202ENST00000395146 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
AFF1-202ENST00000395146 KRTAP9-2Q9BYQ4 174 aa2.99□□□□□ -1.93
AFF1-202ENST00000395146 SYNE1Q8NF91 8797 aaKnown RBP2.93□□□□□ -1.94
AFF1-202ENST00000395146 KRTAP6-1Q3LI64 71 aa2.93□□□□□ -1.94
AFF1-202ENST00000395146 LCE1AQ5T7P2 110 aa2.92□□□□□ -1.94
AFF1-202ENST00000395146 LCE5AQ5TCM9 118 aa2.91□□□□□ -1.94
AFF1-202ENST00000395146 KRTAP6-2Q3LI66 62 aa2.89□□□□□ -1.95
AFF1-202ENST00000395146 MUC2Q02817 5179 aa2.89□□□□□ -1.95
AFF1-202ENST00000395146 KRTAP9-4Q9BYQ2 154 aa2.89□□□□□ -1.95
AFF1-202ENST00000395146 FSIP2Q5CZC0 6907 aa2.86□□□□□ -1.95
AFF1-202ENST00000395146 SYNE2Q8WXH0 6885 aaKnown RBP2.81□□□□□ -1.96
AFF1-202ENST00000395146 KRTAP6-3Q3LI67 103 aa2.8□□□□□ -1.96
AFF1-202ENST00000395146 KRTAP9-7A8MTY7 169 aa2.78□□□□□ -1.96
AFF1-202ENST00000395146 KRTAP9-6A0A140TA67 174 aa2.77□□□□□ -1.97
AFF1-202ENST00000395146 LCE4AQ5TA78 99 aa2.75□□□□□ -1.97
AFF1-202ENST00000395146 KRTAP20-1Q3LI63 56 aa2.72□□□□□ -1.97
AFF1-202ENST00000395146 USH2AO75445 5202 aa2.69□□□□□ -1.98
AFF1-202ENST00000395146 OBSCNQ5VST9 7968 aa2.66□□□□□ -1.98
AFF1-202ENST00000395146 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.62□□□□□ -1.99
AFF1-202ENST00000395146 KRTAP2-2Q9BYT5 123 aa2.59□□□□□ -1.99
AFF1-202ENST00000395146 FCGBPQ9Y6R7 5405 aaPredicted RBP2.54□□□□□ -2
AFF1-202ENST00000395146 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
AFF1-202ENST00000395146 LCE1EQ5T753 118 aa2.49□□□□□ -2.01
AFF1-202ENST00000395146 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
AFF1-202ENST00000395146 KMT2DO14686 5537 aa2.48□□□□□ -2.01
AFF1-202ENST00000395146 KRTAP5-9P26371 169 aa2.46□□□□□ -2.02
AFF1-202ENST00000395146 SSPOA2VEC9 5147 aa2.42□□□□□ -2.02
AFF1-202ENST00000395146 NEBP20929 6669 aa2.4□□□□□ -2.03
AFF1-202ENST00000395146 DSTQ03001 7570 aaKnown RBP2.37□□□□□ -2.03
AFF1-202ENST00000395146 KRTAP4-11Q9BYQ6 195 aa2.35□□□□□ -2.03
AFF1-202ENST00000395146 KRTAP20-2Q3LI61 65 aa2.32□□□□□ -2.04
AFF1-202ENST00000395146 KRTAP9-9Q9BYP9 154 aa2.32□□□□□ -2.04
AFF1-202ENST00000395146 MACF1Q9UPN3 7388 aaKnown RBP2.3□□□□□ -2.04
AFF1-202ENST00000395146 KRTAP4-6Q9BYQ5 205 aa2.3□□□□□ -2.04
AFF1-202ENST00000395146 MUC12Q9UKN1 5478 aa2.29□□□□□ -2.04
AFF1-202ENST00000395146 KRTAP5-5Q701N2 237 aaPredicted RBP2.28□□□□□ -2.04
AFF1-202ENST00000395146 MDN1Q9NU22 5596 aa2.25□□□□□ -2.05
AFF1-202ENST00000395146 KRTAP5-4Q6L8H1 288 aa2.18□□□□□ -2.06
AFF1-202ENST00000395146 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
AFF1-202ENST00000395146 KRTAP4-4Q9BYR3 166 aa2.08□□□□□ -2.08
AFF1-202ENST00000395146 GPR98Q8WXG9 6306 aa2.01□□□□□ -2.09
AFF1-202ENST00000395146 KRTAP4-12Q9BQ66 201 aa2□□□□□ -2.09
AFF1-202ENST00000395146 KRTAP4-2Q9BYR5 136 aa2□□□□□ -2.09
AFF1-202ENST00000395146 KRTAP5-3Q6L8H2 238 aa1.9□□□□□ -2.1
AFF1-202ENST00000395146 MUC5ACP98088 5654 aa1.88□□□□□ -2.11
AFF1-202ENST00000395146 AHNAK2Q8IVF2 5795 aa1.85□□□□□ -2.11
AFF1-202ENST00000395146 HMCN1Q96RW7 5635 aa1.82□□□□□ -2.12
AFF1-202ENST00000395146 KRTAP5-10Q6L8G5 202 aa1.81□□□□□ -2.12
AFF1-202ENST00000395146 KRTAP5-2Q701N4 177 aa1.76□□□□□ -2.13
AFF1-202ENST00000395146 MUC5BQ9HC84 5762 aaPredicted RBP1.68□□□□□ -2.14
AFF1-202ENST00000395146 KRTAP5-8O75690 187 aa1.66□□□□□ -2.14
AFF1-202ENST00000395146 KRTAP5-11Q6L8G4 156 aa1.58□□□□□ -2.16
AFF1-202ENST00000395146 KRTAP5-1Q6L8H4 278 aa1.57□□□□□ -2.16
AFF1-202ENST00000395146 AHNAKQ09666 5890 aaKnown RBP1.55□□□□□ -2.16
AFF1-202ENST00000395146 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
AFF1-202ENST00000395146 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.49□□□□□ -2.17
AFF1-202ENST00000395146 KRTAP21-1Q3LI58 79 aa1.48□□□□□ -2.17
AFF1-202ENST00000395146 PHGR1C9JFL3 82 aa1.44□□□□□ -2.18
AFF1-202ENST00000395146 KRTAP5-7Q6L8G8 165 aa1.25□□□□□ -2.21
AFF1-202ENST00000395146 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms