RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 BIRC6Q9NR09 4857 aa2.12□□□□□ -2.07
SYNE2-205ENST00000394768 KRTAP2-3P0C7H8 128 aa2.11□□□□□ -2.07
SYNE2-205ENST00000394768 KRTAP2-4Q9BYR9 128 aa2.11□□□□□ -2.07
SYNE2-205ENST00000394768 HERC2O95714 4834 aa2.11□□□□□ -2.07
SYNE2-205ENST00000394768 TNXBP22105 4242 aa2.11□□□□□ -2.07
SYNE2-205ENST00000394768 PCLOQ9Y6V0 5065 aa2.11□□□□□ -2.07
SYNE2-205ENST00000394768 KRTAP2-1Q9BYU5 128 aa2.1□□□□□ -2.07
SYNE2-205ENST00000394768 KRTAP4-7Q9BYR0 210 aa2.09□□□□□ -2.08
SYNE2-205ENST00000394768 KRTAP6-3Q3LI67 103 aa2.06□□□□□ -2.08
SYNE2-205ENST00000394768 LCE1CQ5T751 118 aa2.05□□□□□ -2.08
SYNE2-205ENST00000394768 LCE1EQ5T753 118 aa2.05□□□□□ -2.08
SYNE2-205ENST00000394768 LCE1FQ5T754 118 aa2.05□□□□□ -2.08
SYNE2-205ENST00000394768 KRTAP9-7A8MTY7 169 aa2.05□□□□□ -2.08
SYNE2-205ENST00000394768 LRP2P98164 4655 aa2.03□□□□□ -2.08
SYNE2-205ENST00000394768 LOC100996750A0A140TA64 210 aa2.03□□□□□ -2.09
SYNE2-205ENST00000394768 KMT2CQ8NEZ4 4911 aaKnown RBP2.02□□□□□ -2.09
SYNE2-205ENST00000394768 KRTAP2-2Q9BYT5 123 aa2.01□□□□□ -2.09
SYNE2-205ENST00000394768 KRTAP19-2Q3LHN2 52 aa1.99□□□□□ -2.09
SYNE2-205ENST00000394768 SYNE2Q8WXH0 6885 aaKnown RBP1.98□□□□□ -2.09
SYNE2-205ENST00000394768 KRTAP9-4Q9BYQ2 154 aa1.97□□□□□ -2.09
SYNE2-205ENST00000394768 ABCA13Q86UQ4 5058 aa1.97□□□□□ -2.09
SYNE2-205ENST00000394768 KRTAP19-7Q3SYF9 63 aa1.97□□□□□ -2.09
SYNE2-205ENST00000394768 MUC17Q685J3 4493 aa1.97□□□□□ -2.09
SYNE2-205ENST00000394768 KRTAP9-9Q9BYP9 154 aa1.97□□□□□ -2.09
SYNE2-205ENST00000394768 LPAP08519 4548 aa1.96□□□□□ -2.1
SYNE2-205ENST00000394768 KRTAP6-2Q3LI66 62 aa1.95□□□□□ -2.1
SYNE2-205ENST00000394768 KRTAP4-3Q9BYR4 195 aa1.95□□□□□ -2.1
SYNE2-205ENST00000394768 LCE2AQ5TA79 106 aaPredicted RBP1.93□□□□□ -2.1
SYNE2-205ENST00000394768 EPPK1P58107 5090 aaKnown RBP1.93□□□□□ -2.1
SYNE2-205ENST00000394768 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.89□□□□□ -2.11
SYNE2-205ENST00000394768 RNF213Q63HN8 5207 aa1.89□□□□□ -2.11
SYNE2-205ENST00000394768 KRTAP6-1Q3LI64 71 aa1.87□□□□□ -2.11
SYNE2-205ENST00000394768 FAT4Q6V0I7 4981 aa1.86□□□□□ -2.11
SYNE2-205ENST00000394768 KRTAP4-9Q9BYQ8 210 aa1.85□□□□□ -2.11
SYNE2-205ENST00000394768 HMCN2Q8NDA2 5059 aa1.83□□□□□ -2.12
SYNE2-205ENST00000394768 FSIP2Q5CZC0 6907 aa1.82□□□□□ -2.12
SYNE2-205ENST00000394768 SYNE1Q8NF91 8797 aaKnown RBP1.8□□□□□ -2.12
SYNE2-205ENST00000394768 UBR4Q5T4S7 5183 aa1.79□□□□□ -2.12
SYNE2-205ENST00000394768 NEBP20929 6669 aa1.66□□□□□ -2.14
SYNE2-205ENST00000394768 KRTAP9-6A8MVA2 160 aa1.66□□□□□ -2.14
SYNE2-205ENST00000394768 MUC2Q02817 5179 aa1.66□□□□□ -2.14
SYNE2-205ENST00000394768 KRTAP5-9P26371 169 aa1.63□□□□□ -2.15
SYNE2-205ENST00000394768 USH2AO75445 5202 aa1.61□□□□□ -2.15
SYNE2-205ENST00000394768 KRTAP20-2Q3LI61 65 aa1.58□□□□□ -2.16
SYNE2-205ENST00000394768 OBSCNQ5VST9 7968 aa1.58□□□□□ -2.16
SYNE2-205ENST00000394768 KRTAP4-11Q9BYQ6 195 aa1.55□□□□□ -2.16
SYNE2-205ENST00000394768 KRTAP5-4Q6L8H1 288 aa1.54□□□□□ -2.16
SYNE2-205ENST00000394768 MACF1Q9UPN3 7388 aaKnown RBP1.51□□□□□ -2.17
SYNE2-205ENST00000394768 KRTAP4-6Q9BYQ5 205 aa1.5□□□□□ -2.17
SYNE2-205ENST00000394768 FCGBPQ9Y6R7 5405 aaPredicted RBP1.48□□□□□ -2.17
SYNE2-205ENST00000394768 MDN1Q9NU22 5596 aa1.47□□□□□ -2.17
SYNE2-205ENST00000394768 DSTQ03001 7570 aaKnown RBP1.45□□□□□ -2.18
SYNE2-205ENST00000394768 GPR98Q8WXG9 6306 aa1.45□□□□□ -2.18
SYNE2-205ENST00000394768 KMT2DO14686 5537 aa1.45□□□□□ -2.18
SYNE2-205ENST00000394768 SSPOA2VEC9 5147 aa1.43□□□□□ -2.18
SYNE2-205ENST00000394768 MUC12Q9UKN1 5478 aa1.42□□□□□ -2.18
SYNE2-205ENST00000394768 KRTAP4-4Q9BYR3 166 aa1.4□□□□□ -2.18
SYNE2-205ENST00000394768 KRTAP4-12Q9BQ66 201 aa1.39□□□□□ -2.19
SYNE2-205ENST00000394768 KRTAP4-2Q9BYR5 136 aa1.39□□□□□ -2.19
SYNE2-205ENST00000394768 MUC5ACP98088 5654 aa1.37□□□□□ -2.19
SYNE2-205ENST00000394768 KRTAP5-3Q6L8H2 238 aa1.34□□□□□ -2.19
SYNE2-205ENST00000394768 KRTAP5-5Q701N2 237 aaPredicted RBP1.3□□□□□ -2.2
SYNE2-205ENST00000394768 AHNAK2Q8IVF2 5795 aa1.26□□□□□ -2.21
SYNE2-205ENST00000394768 PHGR1C9JFL3 82 aa1.23□□□□□ -2.21
SYNE2-205ENST00000394768 MUC19Q7Z5P9 8384 aa1.23□□□□□ -2.21
SYNE2-205ENST00000394768 MUC5BQ9HC84 5762 aaPredicted RBP1.2□□□□□ -2.22
SYNE2-205ENST00000394768 HMCN1Q96RW7 5635 aa1.14□□□□□ -2.23
SYNE2-205ENST00000394768 KRTAP5-8O75690 187 aa1.12□□□□□ -2.23
SYNE2-205ENST00000394768 AHNAKQ09666 5890 aaKnown RBP1.1□□□□□ -2.23
SYNE2-205ENST00000394768 KRTAP5-10Q6L8G5 202 aa1.09□□□□□ -2.23
SYNE2-205ENST00000394768 KRTAP5-11Q6L8G4 156 aa1.07□□□□□ -2.24
SYNE2-205ENST00000394768 KRTAP5-2Q701N4 177 aa1.03□□□□□ -2.24
SYNE2-205ENST00000394768 KRTAP21-1Q3LI58 79 aa0.94□□□□□ -2.26
SYNE2-205ENST00000394768 KRTAP5-1Q6L8H4 278 aa0.94□□□□□ -2.26
SYNE2-205ENST00000394768 KRTAP21-2Q3LI59 83 aa0.92□□□□□ -2.26
SYNE2-205ENST00000394768 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.89□□□□□ -2.27
SYNE2-205ENST00000394768 KRTAP5-7Q6L8G8 165 aa0.87□□□□□ -2.27
SYNE2-205ENST00000394768 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 54 ms