RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 LCE3EQ5T5B0 92 aa4.01□□□□□ -1.77
CLTC-202ENST00000393043 LCE2DQ5TA82 110 aaPredicted RBP3.97□□□□□ -1.77
CLTC-202ENST00000393043 HMCN2Q8NDA2 5059 aa3.96□□□□□ -1.78
CLTC-202ENST00000393043 KRTAP19-7Q3SYF9 63 aa3.94□□□□□ -1.78
CLTC-202ENST00000393043 UBR4Q5T4S7 5183 aa3.91□□□□□ -1.78
CLTC-202ENST00000393043 KRTAP9-2Q9BYQ4 174 aa3.9□□□□□ -1.79
CLTC-202ENST00000393043 MT3P25713 68 aa3.85□□□□□ -1.79
CLTC-202ENST00000393043 LOC100996750A0A140TA64 210 aa3.84□□□□□ -1.79
CLTC-202ENST00000393043 KRTAP4-3Q9BYR4 195 aa3.84□□□□□ -1.79
CLTC-202ENST00000393043 MT1AP04731 61 aa3.75□□□□□ -1.81
CLTC-202ENST00000393043 KRTAP2-3P0C7H8 128 aa3.75□□□□□ -1.81
CLTC-202ENST00000393043 KRTAP2-4Q9BYR9 128 aa3.75□□□□□ -1.81
CLTC-202ENST00000393043 KRTAP2-1Q9BYU5 128 aa3.75□□□□□ -1.81
CLTC-202ENST00000393043 FSIP2Q5CZC0 6907 aa3.73□□□□□ -1.81
CLTC-202ENST00000393043 SYNE1Q8NF91 8797 aaKnown RBP3.72□□□□□ -1.81
CLTC-202ENST00000393043 MT4P47944 62 aa3.68□□□□□ -1.82
CLTC-202ENST00000393043 LCE1AQ5T7P2 110 aa3.66□□□□□ -1.82
CLTC-202ENST00000393043 MUC2Q02817 5179 aa3.64□□□□□ -1.83
CLTC-202ENST00000393043 KRTAP9-6A0A140TA67 174 aa3.64□□□□□ -1.83
CLTC-202ENST00000393043 PRM1P04553 51 aa3.64□□□□□ -1.83
CLTC-202ENST00000393043 KRTAP9-6A8MVA2 160 aa3.6□□□□□ -1.83
CLTC-202ENST00000393043 LCE5AQ5TCM9 118 aa3.59□□□□□ -1.83
CLTC-202ENST00000393043 KRTAP6-3Q3LI67 103 aa3.57□□□□□ -1.84
CLTC-202ENST00000393043 KRTAP4-9Q9BYQ8 210 aa3.52□□□□□ -1.85
CLTC-202ENST00000393043 LCE1DQ5T752 114 aa3.5□□□□□ -1.85
CLTC-202ENST00000393043 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
CLTC-202ENST00000393043 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
CLTC-202ENST00000393043 KRTAP9-4Q9BYQ2 154 aa3.45□□□□□ -1.86
CLTC-202ENST00000393043 KRTAP9-7A8MTY7 169 aa3.44□□□□□ -1.86
CLTC-202ENST00000393043 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.42□□□□□ -1.86
CLTC-202ENST00000393043 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
CLTC-202ENST00000393043 USH2AO75445 5202 aa3.41□□□□□ -1.86
CLTC-202ENST00000393043 KRTAP20-1Q3LI63 56 aa3.41□□□□□ -1.86
CLTC-202ENST00000393043 SYNE2Q8WXH0 6885 aaKnown RBP3.4□□□□□ -1.87
CLTC-202ENST00000393043 KRTAP6-2Q3LI66 62 aa3.4□□□□□ -1.87
CLTC-202ENST00000393043 LCE4AQ5TA78 99 aa3.39□□□□□ -1.87
CLTC-202ENST00000393043 KRTAP2-2Q9BYT5 123 aa3.29□□□□□ -1.88
CLTC-202ENST00000393043 FCGBPQ9Y6R7 5405 aaPredicted RBP3.23□□□□□ -1.89
CLTC-202ENST00000393043 KRTAP5-9P26371 169 aa3.2□□□□□ -1.9
CLTC-202ENST00000393043 KMT2DO14686 5537 aa3.16□□□□□ -1.9
CLTC-202ENST00000393043 DSTQ03001 7570 aaKnown RBP3.12□□□□□ -1.91
CLTC-202ENST00000393043 SSPOA2VEC9 5147 aa3.1□□□□□ -1.91
CLTC-202ENST00000393043 MACF1Q9UPN3 7388 aaKnown RBP3.09□□□□□ -1.91
CLTC-202ENST00000393043 MUC12Q9UKN1 5478 aa2.99□□□□□ -1.93
CLTC-202ENST00000393043 NEBP20929 6669 aa2.95□□□□□ -1.94
CLTC-202ENST00000393043 KRTAP20-2Q3LI61 65 aa2.9□□□□□ -1.95
CLTC-202ENST00000393043 KRTAP4-6Q9BYQ5 205 aa2.89□□□□□ -1.95
CLTC-202ENST00000393043 LCE1CQ5T751 118 aa2.87□□□□□ -1.95
CLTC-202ENST00000393043 LCE1EQ5T753 118 aa2.87□□□□□ -1.95
CLTC-202ENST00000393043 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
CLTC-202ENST00000393043 KRTAP9-9Q9BYP9 154 aa2.8□□□□□ -1.96
CLTC-202ENST00000393043 MDN1Q9NU22 5596 aa2.78□□□□□ -1.96
CLTC-202ENST00000393043 KRTAP5-5Q701N2 237 aaPredicted RBP2.76□□□□□ -1.97
CLTC-202ENST00000393043 KRTAP5-4Q6L8H1 288 aa2.74□□□□□ -1.97
CLTC-202ENST00000393043 KRTAP4-11Q9BYQ6 195 aa2.67□□□□□ -1.98
CLTC-202ENST00000393043 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
CLTC-202ENST00000393043 GPR98Q8WXG9 6306 aa2.49□□□□□ -2.01
CLTC-202ENST00000393043 KRTAP4-4Q9BYR3 166 aa2.43□□□□□ -2.02
CLTC-202ENST00000393043 KRTAP4-12Q9BQ66 201 aa2.4□□□□□ -2.02
CLTC-202ENST00000393043 KRTAP4-2Q9BYR5 136 aa2.4□□□□□ -2.02
CLTC-202ENST00000393043 KRTAP5-3Q6L8H2 238 aa2.39□□□□□ -2.03
CLTC-202ENST00000393043 MUC5ACP98088 5654 aa2.33□□□□□ -2.04
CLTC-202ENST00000393043 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
CLTC-202ENST00000393043 HMCN1Q96RW7 5635 aa2.23□□□□□ -2.05
CLTC-202ENST00000393043 KRTAP5-10Q6L8G5 202 aa2.17□□□□□ -2.06
CLTC-202ENST00000393043 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
CLTC-202ENST00000393043 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
CLTC-202ENST00000393043 KRTAP5-11Q6L8G4 156 aa1.99□□□□□ -2.09
CLTC-202ENST00000393043 MUC5BQ9HC84 5762 aaPredicted RBP1.97□□□□□ -2.09
CLTC-202ENST00000393043 KRTAP5-1Q6L8H4 278 aa1.97□□□□□ -2.09
CLTC-202ENST00000393043 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
CLTC-202ENST00000393043 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.85□□□□□ -2.11
CLTC-202ENST00000393043 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
CLTC-202ENST00000393043 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
CLTC-202ENST00000393043 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
CLTC-202ENST00000393043 KRTAP5-7Q6L8G8 165 aa1.67□□□□□ -2.14
CLTC-202ENST00000393043 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 5.6 ms