RNA–Protein interactions for RNA: ENST00000382381.7

ABCA3-202, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCA3, Length 6,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-202ENST00000382381 LCE2AQ5TA79 106 aaPredicted RBP4.2□□□□□ -1.74
ABCA3-202ENST00000382381 UBR4Q5T4S7 5183 aa4.17□□□□□ -1.74
ABCA3-202ENST00000382381 KRTAP19-3Q7Z4W3 81 aa4.16□□□□□ -1.74
ABCA3-202ENST00000382381 KRTAP19-6Q3LI70 58 aa4.15□□□□□ -1.75
ABCA3-202ENST00000382381 RNF213Q63HN8 5207 aa4.14□□□□□ -1.75
ABCA3-202ENST00000382381 LOC100996750A0A140TA64 210 aa4.14□□□□□ -1.75
ABCA3-202ENST00000382381 LCE1BQ5T7P3 118 aa4.1□□□□□ -1.75
ABCA3-202ENST00000382381 KRTAP4-3Q9BYR4 195 aa4.1□□□□□ -1.75
ABCA3-202ENST00000382381 MT1LQ93083 61 aa4.09□□□□□ -1.76
ABCA3-202ENST00000382381 MT1EP04732 61 aa4.08□□□□□ -1.76
ABCA3-202ENST00000382381 PRM1P04553 51 aa4.04□□□□□ -1.76
ABCA3-202ENST00000382381 LCE1DQ5T752 114 aa4.04□□□□□ -1.76
ABCA3-202ENST00000382381 KRTAP9-7A8MTY7 169 aa4.02□□□□□ -1.77
ABCA3-202ENST00000382381 HMCN2Q8NDA2 5059 aa4□□□□□ -1.77
ABCA3-202ENST00000382381 SYNE2Q8WXH0 6885 aaKnown RBP4□□□□□ -1.77
ABCA3-202ENST00000382381 MUC2Q02817 5179 aa3.98□□□□□ -1.77
ABCA3-202ENST00000382381 MT1MQ8N339 61 aa3.97□□□□□ -1.77
ABCA3-202ENST00000382381 KRTAP4-9Q9BYQ8 210 aa3.94□□□□□ -1.78
ABCA3-202ENST00000382381 MT3P25713 68 aa3.93□□□□□ -1.78
ABCA3-202ENST00000382381 KRTAP20-1Q3LI63 56 aa3.92□□□□□ -1.78
ABCA3-202ENST00000382381 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.88□□□□□ -1.79
ABCA3-202ENST00000382381 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
ABCA3-202ENST00000382381 LCE5AQ5TCM9 118 aa3.79□□□□□ -1.8
ABCA3-202ENST00000382381 KRTAP6-3Q3LI67 103 aa3.78□□□□□ -1.8
ABCA3-202ENST00000382381 KRTAP19-7Q3SYF9 63 aa3.77□□□□□ -1.81
ABCA3-202ENST00000382381 KRTAP2-3P0C7H8 128 aa3.7□□□□□ -1.82
ABCA3-202ENST00000382381 KRTAP2-4Q9BYR9 128 aa3.7□□□□□ -1.82
ABCA3-202ENST00000382381 KRTAP2-1Q9BYU5 128 aa3.64□□□□□ -1.83
ABCA3-202ENST00000382381 LCE1AQ5T7P2 110 aa3.61□□□□□ -1.83
ABCA3-202ENST00000382381 MT1AP04731 61 aa3.6□□□□□ -1.83
ABCA3-202ENST00000382381 KRTAP9-6A8MVA2 160 aa3.58□□□□□ -1.84
ABCA3-202ENST00000382381 DSTQ03001 7570 aaKnown RBP3.57□□□□□ -1.84
ABCA3-202ENST00000382381 KRTAP2-2Q9BYT5 123 aa3.57□□□□□ -1.84
ABCA3-202ENST00000382381 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
ABCA3-202ENST00000382381 LCE1CQ5T751 118 aa3.53□□□□□ -1.84
ABCA3-202ENST00000382381 LCE1EQ5T753 118 aa3.53□□□□□ -1.84
ABCA3-202ENST00000382381 LCE1FQ5T754 118 aa3.53□□□□□ -1.84
ABCA3-202ENST00000382381 KRTAP6-1Q3LI64 71 aa3.52□□□□□ -1.85
ABCA3-202ENST00000382381 FCGBPQ9Y6R7 5405 aaPredicted RBP3.52□□□□□ -1.85
ABCA3-202ENST00000382381 MACF1Q9UPN3 7388 aaKnown RBP3.49□□□□□ -1.85
ABCA3-202ENST00000382381 KMT2DO14686 5537 aa3.46□□□□□ -1.86
ABCA3-202ENST00000382381 USH2AO75445 5202 aa3.46□□□□□ -1.86
ABCA3-202ENST00000382381 LCE4AQ5TA78 99 aa3.44□□□□□ -1.86
ABCA3-202ENST00000382381 KRTAP9-4Q9BYQ2 154 aa3.36□□□□□ -1.87
ABCA3-202ENST00000382381 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
ABCA3-202ENST00000382381 NEBP20929 6669 aa3.25□□□□□ -1.89
ABCA3-202ENST00000382381 SSPOA2VEC9 5147 aa3.22□□□□□ -1.89
ABCA3-202ENST00000382381 KRTAP5-9P26371 169 aa3.19□□□□□ -1.9
ABCA3-202ENST00000382381 KRTAP4-6Q9BYQ5 205 aa3.16□□□□□ -1.9
ABCA3-202ENST00000382381 MUC12Q9UKN1 5478 aa3.15□□□□□ -1.91
ABCA3-202ENST00000382381 KRTAP9-9Q9BYP9 154 aa3.08□□□□□ -1.92
ABCA3-202ENST00000382381 KRTAP4-11Q9BYQ6 195 aa3.06□□□□□ -1.92
ABCA3-202ENST00000382381 KRTAP20-2Q3LI61 65 aa2.98□□□□□ -1.93
ABCA3-202ENST00000382381 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
ABCA3-202ENST00000382381 MDN1Q9NU22 5596 aa2.95□□□□□ -1.94
ABCA3-202ENST00000382381 KRTAP4-12Q9BQ66 201 aa2.9□□□□□ -1.95
ABCA3-202ENST00000382381 KRTAP4-2Q9BYR5 136 aa2.9□□□□□ -1.95
ABCA3-202ENST00000382381 KRTAP5-4Q6L8H1 288 aa2.76□□□□□ -1.97
ABCA3-202ENST00000382381 KRTAP5-5Q701N2 237 aaPredicted RBP2.73□□□□□ -1.97
ABCA3-202ENST00000382381 GPR98Q8WXG9 6306 aa2.73□□□□□ -1.97
ABCA3-202ENST00000382381 KRTAP5-3Q6L8H2 238 aa2.57□□□□□ -2
ABCA3-202ENST00000382381 MUC5ACP98088 5654 aa2.5□□□□□ -2.01
ABCA3-202ENST00000382381 KRTAP5-8O75690 187 aa2.37□□□□□ -2.03
ABCA3-202ENST00000382381 HMCN1Q96RW7 5635 aa2.34□□□□□ -2.04
ABCA3-202ENST00000382381 AHNAK2Q8IVF2 5795 aa2.18□□□□□ -2.06
ABCA3-202ENST00000382381 KRTAP5-2Q701N4 177 aa2.14□□□□□ -2.07
ABCA3-202ENST00000382381 PHGR1C9JFL3 82 aa2.11□□□□□ -2.07
ABCA3-202ENST00000382381 KRTAP5-10Q6L8G5 202 aa1.99□□□□□ -2.09
ABCA3-202ENST00000382381 KRTAP5-7Q6L8G8 165 aa1.97□□□□□ -2.09
ABCA3-202ENST00000382381 KRTAP5-1Q6L8H4 278 aa1.94□□□□□ -2.1
ABCA3-202ENST00000382381 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
ABCA3-202ENST00000382381 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
ABCA3-202ENST00000382381 KRTAP5-11Q6L8G4 156 aa1.83□□□□□ -2.12
ABCA3-202ENST00000382381 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
ABCA3-202ENST00000382381 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.67□□□□□ -2.14
ABCA3-202ENST00000382381 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.15
ABCA3-202ENST00000382381 MUC16Q8WXI7 14507 aa1.21□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 12.1 ms