RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 KRTAP2-3P0C7H8 128 aa2.17□□□□□ -2.06
CCDC171-201ENST00000380701 KRTAP2-4Q9BYR9 128 aa2.17□□□□□ -2.06
CCDC171-201ENST00000380701 LCE4AQ5TA78 99 aa2.15□□□□□ -2.07
CCDC171-201ENST00000380701 KRTAP9-7A8MTY7 169 aa2.14□□□□□ -2.07
CCDC171-201ENST00000380701 ABCA13Q86UQ4 5058 aa2.13□□□□□ -2.07
CCDC171-201ENST00000380701 HYDINQ4G0P3 5121 aa2.12□□□□□ -2.07
CCDC171-201ENST00000380701 MUC17Q685J3 4493 aa2.12□□□□□ -2.07
CCDC171-201ENST00000380701 SYNE1Q8NF91 8797 aaKnown RBP2.12□□□□□ -2.07
CCDC171-201ENST00000380701 KMT2AQ03164 3969 aa2.11□□□□□ -2.07
CCDC171-201ENST00000380701 LCE1DQ5T752 114 aa2.09□□□□□ -2.07
CCDC171-201ENST00000380701 KRTAP19-7Q3SYF9 63 aa2.09□□□□□ -2.07
CCDC171-201ENST00000380701 LCE1BQ5T7P3 118 aa2.09□□□□□ -2.08
CCDC171-201ENST00000380701 KRTAP4-7Q9BYR0 210 aa2.09□□□□□ -2.08
CCDC171-201ENST00000380701 KRTAP2-2Q9BYT5 123 aa2.09□□□□□ -2.08
CCDC171-201ENST00000380701 KRTAP2-1Q9BYU5 128 aa2.09□□□□□ -2.08
CCDC171-201ENST00000380701 RNF213Q63HN8 5207 aa2.06□□□□□ -2.08
CCDC171-201ENST00000380701 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.03□□□□□ -2.08
CCDC171-201ENST00000380701 FLGP20930 4061 aaPredicted RBP2.03□□□□□ -2.08
CCDC171-201ENST00000380701 PRM1P04553 51 aa2.03□□□□□ -2.09
CCDC171-201ENST00000380701 HMCN2Q8NDA2 5059 aa2.02□□□□□ -2.09
CCDC171-201ENST00000380701 LCE5AQ5TCM9 118 aa2.01□□□□□ -2.09
CCDC171-201ENST00000380701 UBR4Q5T4S7 5183 aa2□□□□□ -2.09
CCDC171-201ENST00000380701 KRTAP9-4Q9BYQ2 154 aa1.99□□□□□ -2.09
CCDC171-201ENST00000380701 TNXBP22105 4242 aa1.99□□□□□ -2.09
CCDC171-201ENST00000380701 LOC100996750A0A140TA64 210 aa1.97□□□□□ -2.09
CCDC171-201ENST00000380701 KRTAP4-3Q9BYR4 195 aa1.97□□□□□ -2.09
CCDC171-201ENST00000380701 SYNE2Q8WXH0 6885 aaKnown RBP1.95□□□□□ -2.1
CCDC171-201ENST00000380701 FAT4Q6V0I7 4981 aa1.94□□□□□ -2.1
CCDC171-201ENST00000380701 KRTAP6-2Q3LI66 62 aa1.9□□□□□ -2.11
CCDC171-201ENST00000380701 KRTAP6-1Q3LI64 71 aa1.89□□□□□ -2.11
CCDC171-201ENST00000380701 GPR98Q8WXG9 6306 aa1.87□□□□□ -2.11
CCDC171-201ENST00000380701 FSIP2Q5CZC0 6907 aa1.85□□□□□ -2.11
CCDC171-201ENST00000380701 KRTAP9-9Q9BYP9 154 aa1.84□□□□□ -2.11
CCDC171-201ENST00000380701 LPAP08519 4548 aa1.84□□□□□ -2.12
CCDC171-201ENST00000380701 OBSCNQ5VST9 7968 aa1.83□□□□□ -2.12
CCDC171-201ENST00000380701 LCE1CQ5T751 118 aa1.83□□□□□ -2.12
CCDC171-201ENST00000380701 LCE1EQ5T753 118 aa1.83□□□□□ -2.12
CCDC171-201ENST00000380701 LCE1FQ5T754 118 aa1.83□□□□□ -2.12
CCDC171-201ENST00000380701 KRTAP5-9P26371 169 aa1.82□□□□□ -2.12
CCDC171-201ENST00000380701 KRTAP4-9Q9BYQ8 210 aa1.81□□□□□ -2.12
CCDC171-201ENST00000380701 NEBP20929 6669 aa1.81□□□□□ -2.12
CCDC171-201ENST00000380701 MUC2Q02817 5179 aa1.81□□□□□ -2.12
CCDC171-201ENST00000380701 KRTAP9-6A8MVA2 160 aa1.74□□□□□ -2.13
CCDC171-201ENST00000380701 MACF1Q9UPN3 7388 aaKnown RBP1.74□□□□□ -2.13
CCDC171-201ENST00000380701 KRTAP4-6Q9BYQ5 205 aa1.73□□□□□ -2.13
CCDC171-201ENST00000380701 MUC12Q9UKN1 5478 aa1.71□□□□□ -2.14
CCDC171-201ENST00000380701 USH2AO75445 5202 aa1.7□□□□□ -2.14
CCDC171-201ENST00000380701 KMT2DO14686 5537 aa1.68□□□□□ -2.14
CCDC171-201ENST00000380701 SSPOA2VEC9 5147 aa1.67□□□□□ -2.14
CCDC171-201ENST00000380701 KRTAP20-2Q3LI61 65 aa1.66□□□□□ -2.14
CCDC171-201ENST00000380701 KRTAP5-4Q6L8H1 288 aa1.63□□□□□ -2.15
CCDC171-201ENST00000380701 MDN1Q9NU22 5596 aa1.62□□□□□ -2.15
CCDC171-201ENST00000380701 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.16
CCDC171-201ENST00000380701 FCGBPQ9Y6R7 5405 aaPredicted RBP1.57□□□□□ -2.16
CCDC171-201ENST00000380701 DSTQ03001 7570 aaKnown RBP1.55□□□□□ -2.16
CCDC171-201ENST00000380701 AHNAK2Q8IVF2 5795 aa1.53□□□□□ -2.16
CCDC171-201ENST00000380701 KRTAP4-11Q9BYQ6 195 aa1.51□□□□□ -2.17
CCDC171-201ENST00000380701 KRTAP4-12Q9BQ66 201 aa1.44□□□□□ -2.18
CCDC171-201ENST00000380701 KRTAP5-3Q6L8H2 238 aa1.43□□□□□ -2.18
CCDC171-201ENST00000380701 HMCN1Q96RW7 5635 aa1.43□□□□□ -2.18
CCDC171-201ENST00000380701 KRTAP5-5Q701N2 237 aaPredicted RBP1.4□□□□□ -2.18
CCDC171-201ENST00000380701 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.37□□□□□ -2.19
CCDC171-201ENST00000380701 MUC5ACP98088 5654 aa1.36□□□□□ -2.19
CCDC171-201ENST00000380701 KRTAP4-2Q9BYR5 136 aa1.34□□□□□ -2.2
CCDC171-201ENST00000380701 KRTAP4-4Q9BYR3 166 aa1.3□□□□□ -2.2
CCDC171-201ENST00000380701 KRTAP5-2Q701N4 177 aa1.27□□□□□ -2.21
CCDC171-201ENST00000380701 AHNAKQ09666 5890 aaKnown RBP1.23□□□□□ -2.21
CCDC171-201ENST00000380701 KRTAP5-8O75690 187 aa1.21□□□□□ -2.22
CCDC171-201ENST00000380701 KRTAP5-11Q6L8G4 156 aa1.16□□□□□ -2.22
CCDC171-201ENST00000380701 PHGR1C9JFL3 82 aa1.15□□□□□ -2.22
CCDC171-201ENST00000380701 MUC5BQ9HC84 5762 aaPredicted RBP1.14□□□□□ -2.23
CCDC171-201ENST00000380701 KRTAP5-10Q6L8G5 202 aa1.12□□□□□ -2.23
CCDC171-201ENST00000380701 KRTAP5-7Q6L8G8 165 aa1.02□□□□□ -2.25
CCDC171-201ENST00000380701 KRTAP5-1Q6L8H4 278 aa1.01□□□□□ -2.25
CCDC171-201ENST00000380701 KRTAP21-2Q3LI59 83 aa0.95□□□□□ -2.26
CCDC171-201ENST00000380701 KRTAP21-1Q3LI58 79 aa0.91□□□□□ -2.26
CCDC171-201ENST00000380701 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 210.8 ms