RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 MT1AP04731 61 aa4.96□□□□□ -1.62
COL4A3BP-203ENST00000380494 KRTAP19-7Q3SYF9 63 aa4.94□□□□□ -1.62
COL4A3BP-203ENST00000380494 HYDINQ4G0P3 5121 aa4.94□□□□□ -1.62
COL4A3BP-203ENST00000380494 KRTAP4-3Q9BYR4 195 aa4.93□□□□□ -1.62
COL4A3BP-203ENST00000380494 BIRC6Q9NR09 4857 aa4.9□□□□□ -1.63
COL4A3BP-203ENST00000380494 MT4P47944 62 aa4.8□□□□□ -1.64
COL4A3BP-203ENST00000380494 PCLOQ9Y6V0 5065 aa4.76□□□□□ -1.65
COL4A3BP-203ENST00000380494 KRTAP4-9Q9BYQ8 210 aa4.75□□□□□ -1.65
COL4A3BP-203ENST00000380494 LCE1BQ5T7P3 118 aa4.75□□□□□ -1.65
COL4A3BP-203ENST00000380494 LCE1DQ5T752 114 aa4.73□□□□□ -1.65
COL4A3BP-203ENST00000380494 SYNE1Q8NF91 8797 aaKnown RBP4.7□□□□□ -1.66
COL4A3BP-203ENST00000380494 KRTAP9-6A8MVA2 160 aa4.67□□□□□ -1.66
COL4A3BP-203ENST00000380494 KRTAP6-2Q3LI66 62 aa4.67□□□□□ -1.66
COL4A3BP-203ENST00000380494 KRTAP9-2Q9BYQ4 174 aa4.57□□□□□ -1.68
COL4A3BP-203ENST00000380494 KRTAP6-1Q3LI64 71 aa4.56□□□□□ -1.68
COL4A3BP-203ENST00000380494 KRTAP9-4Q9BYQ2 154 aa4.56□□□□□ -1.68
COL4A3BP-203ENST00000380494 HMCN2Q8NDA2 5059 aa4.51□□□□□ -1.69
COL4A3BP-203ENST00000380494 LCE5AQ5TCM9 118 aa4.49□□□□□ -1.69
COL4A3BP-203ENST00000380494 LCE2AQ5TA79 106 aaPredicted RBP4.49□□□□□ -1.69
COL4A3BP-203ENST00000380494 KRTAP20-1Q3LI63 56 aa4.48□□□□□ -1.69
COL4A3BP-203ENST00000380494 ABCA13Q86UQ4 5058 aa4.46□□□□□ -1.69
COL4A3BP-203ENST00000380494 KRTAP9-7A8MTY7 169 aa4.46□□□□□ -1.69
COL4A3BP-203ENST00000380494 LCE1AQ5T7P2 110 aa4.45□□□□□ -1.7
COL4A3BP-203ENST00000380494 KRTAP9-6A0A140TA67 174 aa4.43□□□□□ -1.7
COL4A3BP-203ENST00000380494 RNF213Q63HN8 5207 aa4.39□□□□□ -1.71
COL4A3BP-203ENST00000380494 EPPK1P58107 5090 aaKnown RBP4.38□□□□□ -1.71
COL4A3BP-203ENST00000380494 FAT4Q6V0I7 4981 aa4.35□□□□□ -1.71
COL4A3BP-203ENST00000380494 LCE4AQ5TA78 99 aa4.32□□□□□ -1.72
COL4A3BP-203ENST00000380494 KRTAP2-2Q9BYT5 123 aa4.29□□□□□ -1.72
COL4A3BP-203ENST00000380494 KRTAP6-3Q3LI67 103 aa4.29□□□□□ -1.72
COL4A3BP-203ENST00000380494 UBR4Q5T4S7 5183 aa4.17□□□□□ -1.74
COL4A3BP-203ENST00000380494 LCE1CQ5T751 118 aa4.15□□□□□ -1.75
COL4A3BP-203ENST00000380494 LCE1EQ5T753 118 aa4.15□□□□□ -1.75
COL4A3BP-203ENST00000380494 LCE1FQ5T754 118 aa4.15□□□□□ -1.75
COL4A3BP-203ENST00000380494 OBSCNQ5VST9 7968 aa4.15□□□□□ -1.75
COL4A3BP-203ENST00000380494 SYNE2Q8WXH0 6885 aaKnown RBP4.04□□□□□ -1.76
COL4A3BP-203ENST00000380494 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.95□□□□□ -1.78
COL4A3BP-203ENST00000380494 MUC2Q02817 5179 aa3.91□□□□□ -1.78
COL4A3BP-203ENST00000380494 KRTAP9-9Q9BYP9 154 aa3.84□□□□□ -1.79
COL4A3BP-203ENST00000380494 KRTAP4-11Q9BYQ6 195 aa3.84□□□□□ -1.8
COL4A3BP-203ENST00000380494 FSIP2Q5CZC0 6907 aa3.8□□□□□ -1.8
COL4A3BP-203ENST00000380494 KRTAP5-5Q701N2 237 aaPredicted RBP3.68□□□□□ -1.82
COL4A3BP-203ENST00000380494 FCGBPQ9Y6R7 5405 aaPredicted RBP3.68□□□□□ -1.82
COL4A3BP-203ENST00000380494 KRTAP5-9P26371 169 aa3.6□□□□□ -1.83
COL4A3BP-203ENST00000380494 USH2AO75445 5202 aa3.59□□□□□ -1.83
COL4A3BP-203ENST00000380494 KRTAP20-2Q3LI61 65 aa3.51□□□□□ -1.85
COL4A3BP-203ENST00000380494 KRTAP4-6Q9BYQ5 205 aa3.44□□□□□ -1.86
COL4A3BP-203ENST00000380494 KMT2DO14686 5537 aa3.42□□□□□ -1.86
COL4A3BP-203ENST00000380494 SSPOA2VEC9 5147 aa3.41□□□□□ -1.86
COL4A3BP-203ENST00000380494 DSTQ03001 7570 aaKnown RBP3.39□□□□□ -1.87
COL4A3BP-203ENST00000380494 MUC19Q7Z5P9 8384 aa3.36□□□□□ -1.87
COL4A3BP-203ENST00000380494 KRTAP5-4Q6L8H1 288 aa3.3□□□□□ -1.88
COL4A3BP-203ENST00000380494 NEBP20929 6669 aa3.27□□□□□ -1.89
COL4A3BP-203ENST00000380494 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
COL4A3BP-203ENST00000380494 MUC12Q9UKN1 5478 aa3.2□□□□□ -1.9
COL4A3BP-203ENST00000380494 MACF1Q9UPN3 7388 aaKnown RBP3.13□□□□□ -1.91
COL4A3BP-203ENST00000380494 KRTAP4-12Q9BQ66 201 aa3.08□□□□□ -1.92
COL4A3BP-203ENST00000380494 KRTAP4-2Q9BYR5 136 aa3.08□□□□□ -1.92
COL4A3BP-203ENST00000380494 MDN1Q9NU22 5596 aa3.03□□□□□ -1.92
COL4A3BP-203ENST00000380494 KRTAP5-3Q6L8H2 238 aa2.84□□□□□ -1.95
COL4A3BP-203ENST00000380494 KRTAP5-10Q6L8G5 202 aa2.84□□□□□ -1.96
COL4A3BP-203ENST00000380494 GPR98Q8WXG9 6306 aa2.81□□□□□ -1.96
COL4A3BP-203ENST00000380494 KRTAP5-2Q701N4 177 aa2.6□□□□□ -1.99
COL4A3BP-203ENST00000380494 MUC5ACP98088 5654 aa2.56□□□□□ -2
COL4A3BP-203ENST00000380494 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
COL4A3BP-203ENST00000380494 AHNAK2Q8IVF2 5795 aa2.47□□□□□ -2.01
COL4A3BP-203ENST00000380494 PHGR1C9JFL3 82 aa2.44□□□□□ -2.02
COL4A3BP-203ENST00000380494 KRTAP5-1Q6L8H4 278 aa2.42□□□□□ -2.02
COL4A3BP-203ENST00000380494 KRTAP5-8O75690 187 aa2.41□□□□□ -2.02
COL4A3BP-203ENST00000380494 KRTAP5-11Q6L8G4 156 aa2.4□□□□□ -2.02
COL4A3BP-203ENST00000380494 HMCN1Q96RW7 5635 aa2.39□□□□□ -2.03
COL4A3BP-203ENST00000380494 MUC5BQ9HC84 5762 aaPredicted RBP2.35□□□□□ -2.03
COL4A3BP-203ENST00000380494 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
COL4A3BP-203ENST00000380494 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.2□□□□□ -2.06
COL4A3BP-203ENST00000380494 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
COL4A3BP-203ENST00000380494 KRTAP5-7Q6L8G8 165 aa1.81□□□□□ -2.12
COL4A3BP-203ENST00000380494 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 12.6 ms